RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C YCG1Q06680 1035 aa4.33□□□□□ -1.72
CUP9YPL177C IZH3Q07959 543 aa4.33□□□□□ -1.72
CUP9YPL177C SLK19Q08581 821 aaKnown RBP4.33□□□□□ -1.72
CUP9YPL177C SLX4Q12098 748 aa4.33□□□□□ -1.72
CUP9YPL177C RGT2Q12300 763 aa4.33□□□□□ -1.72
CUP9YPL177C TMA7Q3E764 64 aaKnown RBP4.33□□□□□ -1.72
CUP9YPL177C ABF1P14164 731 aa4.32□□□□□ -1.72
CUP9YPL177C KCC4P25389 1037 aa4.32□□□□□ -1.72
CUP9YPL177C YUR1P26725 428 aa4.32□□□□□ -1.72
CUP9YPL177C YIL092WP40497 633 aa4.32□□□□□ -1.72
CUP9YPL177C NET1P47035 1189 aa4.32□□□□□ -1.72
CUP9YPL177C YGR054WP53235 642 aaKnown RBP4.32□□□□□ -1.72
CUP9YPL177C DIP5P53388 608 aa4.32□□□□□ -1.72
CUP9YPL177C HOL1P53389 586 aa4.32□□□□□ -1.72
CUP9YPL177C SQS1P53866 767 aaKnown RBP4.32□□□□□ -1.72
CUP9YPL177C YSH1Q06224 779 aaPredicted RBP4.32□□□□□ -1.72
CUP9YPL177C RTK1Q12100 620 aaPredicted RBP4.32□□□□□ -1.72
CUP9YPL177C LAM4P38800 1345 aa4.31□□□□□ -1.72
CUP9YPL177C STE12P13574 688 aa4.31□□□□□ -1.72
CUP9YPL177C XBP1P40489 647 aa4.31□□□□□ -1.72
CUP9YPL177C SNF12P53628 566 aa4.31□□□□□ -1.72
CUP9YPL177C FMP30Q02883 468 aa4.31□□□□□ -1.72
CUP9YPL177C RKI1Q12189 258 aa4.31□□□□□ -1.72
CUP9YPL177C PHO5P00635 467 aa4.3□□□□□ -1.72
CUP9YPL177C RPA135P22138 1203 aaKnown RBP4.3□□□□□ -1.72
CUP9YPL177C PPE1P38796 400 aa4.3□□□□□ -1.72
CUP9YPL177C STL1P39932 569 aa4.3□□□□□ -1.72
CUP9YPL177C MNT2P53059 558 aa4.3□□□□□ -1.72
CUP9YPL177C PEF1P53238 335 aa4.3□□□□□ -1.72
CUP9YPL177C HLR1Q04429 423 aa4.3□□□□□ -1.72
CUP9YPL177C YOL057WQ08225 711 aa4.3□□□□□ -1.72
CUP9YPL177C BMS1Q08965 1183 aaKnown RBP4.3□□□□□ -1.72
CUP9YPL177C AIM41Q12032 185 aa4.3□□□□□ -1.72
CUP9YPL177C VPS5Q92331 675 aa4.3□□□□□ -1.72
CUP9YPL177C MBR1P23493 339 aa4.29□□□□□ -1.72
CUP9YPL177C SAT4P25333 603 aaKnown RBP4.29□□□□□ -1.72
CUP9YPL177C YMC1P32331 307 aa4.29□□□□□ -1.72
CUP9YPL177C NIC96P34077 839 aa4.29□□□□□ -1.72
CUP9YPL177C MRPL7P36519 292 aa4.29□□□□□ -1.72
CUP9YPL177C APL3P38065 1025 aa4.29□□□□□ -1.72
CUP9YPL177C MAD2P40958 196 aa4.29□□□□□ -1.72
CUP9YPL177C YJR008WP47085 338 aa4.29□□□□□ -1.72
CUP9YPL177C MDR1P53258 950 aa4.29□□□□□ -1.72
CUP9YPL177C SPC98P53540 846 aa4.29□□□□□ -1.72
CUP9YPL177C CIR2Q08822 631 aa4.29□□□□□ -1.72
CUP9YPL177C NUR1Q12066 484 aa4.29□□□□□ -1.72
CUP9YPL177C PCK1P10963 549 aa4.28□□□□□ -1.72
CUP9YPL177C SST2P11972 698 aaKnown RBP4.28□□□□□ -1.72
CUP9YPL177C NUP1P20676 1076 aa4.28□□□□□ -1.72
CUP9YPL177C ARG1P22768 420 aa4.28□□□□□ -1.72
CUP9YPL177C PMC1P38929 1173 aaPredicted RBP4.28□□□□□ -1.72
CUP9YPL177C YEL025CP39991 1188 aa4.28□□□□□ -1.72
CUP9YPL177C SCS2P40075 244 aaKnown RBP4.28□□□□□ -1.72
CUP9YPL177C BPL1P48445 690 aaPredicted RBP4.28□□□□□ -1.72
CUP9YPL177C EFR3Q03653 782 aaKnown RBP4.28□□□□□ -1.72
CUP9YPL177C UFO1Q04511 668 aa4.28□□□□□ -1.72
CUP9YPL177C ARR3Q06598 404 aa4.28□□□□□ -1.72
CUP9YPL177C DIN7Q12086 430 aa4.28□□□□□ -1.72
CUP9YPL177C URA3P03962 267 aa4.27□□□□□ -1.73
CUP9YPL177C PHO3P24031 467 aa4.27□□□□□ -1.73
CUP9YPL177C CWH43P25618 953 aa4.27□□□□□ -1.73
CUP9YPL177C UGP1P32861 499 aaKnown RBP4.27□□□□□ -1.73
CUP9YPL177C PMT6P42934 759 aa4.27□□□□□ -1.73
CUP9YPL177C ASN1P49089 572 aaKnown RBP4.27□□□□□ -1.73
CUP9YPL177C YNR071CP53757 342 aa4.27□□□□□ -1.73
CUP9YPL177C CNM67P53865 581 aaKnown RBP4.27□□□□□ -1.73
CUP9YPL177C MPS1P54199 764 aa4.27□□□□□ -1.73
CUP9YPL177C TRS23Q03784 219 aa4.27□□□□□ -1.73
CUP9YPL177C ADE5,7P07244 802 aaKnown RBP4.26□□□□□ -1.73
CUP9YPL177C STE4P18851 423 aa4.26□□□□□ -1.73
CUP9YPL177C APN1P22936 367 aa4.26□□□□□ -1.73
CUP9YPL177C TGL1P34163 548 aa4.26□□□□□ -1.73
CUP9YPL177C LRO1P40345 661 aa4.26□□□□□ -1.73
CUP9YPL177C TAX4P47030 604 aa4.26□□□□□ -1.73
CUP9YPL177C CEG1Q01159 459 aaPredicted RBP4.26□□□□□ -1.73
CUP9YPL177C MET14Q02196 202 aa4.26□□□□□ -1.73
CUP9YPL177C MFM1Q02783 413 aa4.26□□□□□ -1.73
CUP9YPL177C PSF3Q12146 194 aa4.26□□□□□ -1.73
CUP9YPL177C HOS1Q12214 470 aa4.26□□□□□ -1.73
CUP9YPL177C DBP10Q12389 995 aaKnown RBP4.26□□□□□ -1.73
CUP9YPL177C TUF1P02992 437 aaKnown RBP4.25□□□□□ -1.73
CUP9YPL177C GAL1P04385 528 aa4.25□□□□□ -1.73
CUP9YPL177C ADH4P10127 382 aa4.25□□□□□ -1.73
CUP9YPL177C HOP1P20050 605 aa4.25□□□□□ -1.73
CUP9YPL177C VPS33P20795 691 aa4.25□□□□□ -1.73
CUP9YPL177C CBP3P21560 335 aa4.25□□□□□ -1.73
CUP9YPL177C PET309P32522 965 aaPredicted RBP4.25□□□□□ -1.73
CUP9YPL177C YJL193WP39542 402 aa4.25□□□□□ -1.73
CUP9YPL177C SAW1P39735 261 aa4.25□□□□□ -1.73
CUP9YPL177C ASK10P48361 1146 aa4.25□□□□□ -1.73
CUP9YPL177C YIP4P53093 235 aa4.25□□□□□ -1.73
CUP9YPL177C YDR179W-AQ03983 463 aa4.25□□□□□ -1.73
CUP9YPL177C ULA1Q12059 462 aa4.25□□□□□ -1.73
CUP9YPL177C DHR2P36009 735 aaPredicted RBP4.24□□□□□ -1.73
CUP9YPL177C STB5P38699 743 aa4.24□□□□□ -1.73
CUP9YPL177C CEF1Q03654 590 aaPredicted RBP4.24□□□□□ -1.73
CUP9YPL177C NYV1Q12255 253 aa4.24□□□□□ -1.73
CUP9YPL177C MDM20Q12387 796 aaKnown RBP4.24□□□□□ -1.73
CUP9YPL177C VAS1P07806 1104 aaKnown RBP4.23□□□□□ -1.73
CUP9YPL177C SEC12P11655 471 aa4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 66.7 ms