RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W BSC5P53755 489 aa2.56□□□□□ -2
VPS16YPL045W PKH1Q03407 766 aa2.56□□□□□ -2
VPS16YPL045W SYF1Q04048 859 aaPredicted RBP2.56□□□□□ -2
VPS16YPL045W PPN1Q04119 674 aa2.56□□□□□ -2
VPS16YPL045W MCM21Q06675 368 aa2.56□□□□□ -2
VPS16YPL045W YCG1Q06680 1035 aa2.56□□□□□ -2
VPS16YPL045W SGO1Q08490 590 aa2.56□□□□□ -2
VPS16YPL045W SKI3P17883 1432 aaKnown RBP2.56□□□□□ -2
VPS16YPL045W TAF2P23255 1407 aa2.56□□□□□ -2
VPS16YPL045W TY1B-HO13535 1793 aa2.56□□□□□ -2
VPS16YPL045W TY1B-DR5P0C2I2 1755 aa2.56□□□□□ -2
VPS16YPL045W TY1B-DR6P0C2I3 1755 aa2.56□□□□□ -2
VPS16YPL045W TY1B-LR2P0C2I5 1755 aa2.56□□□□□ -2
VPS16YPL045W TY1B-LR3P0C2I6 1755 aaKnown RBP2.56□□□□□ -2
VPS16YPL045W TY1B-PR1P0C2I9 1755 aaKnown RBP2.56□□□□□ -2
VPS16YPL045W TY1B-PR2P0C2J0 1756 aa2.56□□□□□ -2
VPS16YPL045W TY1B-PR3P0C2J1 1755 aaKnown RBP2.56□□□□□ -2
VPS16YPL045W TY1B-JR1P47098 1755 aa2.56□□□□□ -2
VPS16YPL045W TY1B-ML2Q03434 1755 aaKnown RBP2.56□□□□□ -2
VPS16YPL045W TY1B-ER1Q03612 1755 aa2.56□□□□□ -2
VPS16YPL045W TY1B-ML1Q04711 1755 aaKnown RBP2.56□□□□□ -2
VPS16YPL045W TY1B-GR2Q12269 1755 aa2.56□□□□□ -2
VPS16YPL045W TY1B-OLQ12273 1755 aa2.56□□□□□ -2
VPS16YPL045W TY1B-PLQ12414 1755 aaKnown RBP2.56□□□□□ -2
VPS16YPL045W YLR415CO13578 112 aa2.56□□□□□ -2
VPS16YPL045W AI1P03875 834 aa2.56□□□□□ -2
VPS16YPL045W GAL10P04397 699 aa2.56□□□□□ -2
VPS16YPL045W ERG20P08524 352 aaKnown RBP2.56□□□□□ -2
VPS16YPL045W HMG2P12684 1045 aa2.56□□□□□ -2
VPS16YPL045W RNR1P21524 888 aaKnown RBP2.56□□□□□ -2
VPS16YPL045W ARP2P32381 391 aaKnown RBP2.56□□□□□ -2
VPS16YPL045W NPL6P32832 435 aa2.56□□□□□ -2
VPS16YPL045W CNS1P33313 385 aa2.56□□□□□ -2
VPS16YPL045W PEX5P35056 612 aa2.56□□□□□ -2
VPS16YPL045W YBR259WP38338 688 aa2.56□□□□□ -2
VPS16YPL045W NPR2P39923 615 aa2.56□□□□□ -2
VPS16YPL045W KHA1P40309 873 aa2.56□□□□□ -2
VPS16YPL045W BST1P43571 1029 aa2.56□□□□□ -2
VPS16YPL045W TIM50Q02776 476 aa2.56□□□□□ -2
VPS16YPL045W UTP21Q06078 939 aaPredicted RBP2.56□□□□□ -2
VPS16YPL045W ADY3Q07732 790 aa2.56□□□□□ -2
VPS16YPL045W TPO1Q07824 586 aa2.56□□□□□ -2
VPS16YPL045W ICL2Q12031 575 aa2.56□□□□□ -2
VPS16YPL045W BIK1P11709 440 aa2.55□□□□□ -2
VPS16YPL045W OLE1P21147 510 aaKnown RBP2.55□□□□□ -2
VPS16YPL045W MSB1P21339 1137 aaKnown RBP2.55□□□□□ -2
VPS16YPL045W ERG6P25087 383 aaKnown RBP2.55□□□□□ -2
VPS16YPL045W SGF29P25554 259 aa2.55□□□□□ -2
VPS16YPL045W SEC21P32074 935 aaKnown RBP2.55□□□□□ -2
VPS16YPL045W ECM32P32644 1121 aaKnown RBP2.55□□□□□ -2
VPS16YPL045W PXA2P34230 853 aa2.55□□□□□ -2
VPS16YPL045W MCX1P38323 520 aaPredicted RBP2.55□□□□□ -2
VPS16YPL045W SIC1P38634 284 aa2.55□□□□□ -2
VPS16YPL045W FSH1P38777 243 aaKnown RBP2.55□□□□□ -2
VPS16YPL045W CRG1P38892 291 aaRIP-Chip data2.55□□□□□ -2not detected
VPS16YPL045W CAB2P40506 365 aa2.55□□□□□ -2
VPS16YPL045W MET12P46151 657 aa2.55□□□□□ -2
VPS16YPL045W GCV2P49095 1034 aa2.55□□□□□ -2
VPS16YPL045W COX18P53239 316 aa2.55□□□□□ -2
VPS16YPL045W YPL071CQ02864 156 aa2.55□□□□□ -2
VPS16YPL045W MFB1Q04922 465 aa2.55□□□□□ -2
VPS16YPL045W ADY4Q05955 493 aa2.55□□□□□ -2
VPS16YPL045W TDA6Q06466 467 aa2.55□□□□□ -2
VPS16YPL045W COX17Q12287 69 aa2.55□□□□□ -2
VPS16YPL045W HIF1Q12373 385 aa2.55□□□□□ -2
VPS16YPL045W SWM1Q12379 170 aa2.55□□□□□ -2
VPS16YPL045W LPX1Q12405 387 aaKnown RBP2.55□□□□□ -2
VPS16YPL045W PGA3Q12746 312 aaKnown RBP2.55□□□□□ -2
VPS16YPL045W RPO31P04051 1460 aa2.55□□□□□ -2
VPS16YPL045W ESC1Q03661 1658 aaKnown RBP2.55□□□□□ -2
VPS16YPL045W HSP82P02829 709 aaKnown RBP2.54□□□□□ -2
VPS16YPL045W GCD1P09032 578 aaPredicted RBP2.54□□□□□ -2
VPS16YPL045W RPL19AP0CX82 189 aaKnown RBP2.54□□□□□ -2
VPS16YPL045W RPL19BP0CX83 189 aaPredicted RBP2.54□□□□□ -2
VPS16YPL045W PRP22P24384 1145 aaKnown RBP2.54□□□□□ -2
VPS16YPL045W RPS0AP32905 252 aaKnown RBP2.54□□□□□ -2
VPS16YPL045W MTH1P35198 433 aa2.54□□□□□ -2
VPS16YPL045W CTF13P35203 478 aa2.54□□□□□ -2
VPS16YPL045W ECM1P39715 212 aa2.54□□□□□ -2
VPS16YPL045W FTR1P40088 404 aa2.54□□□□□ -2
VPS16YPL045W YFL066CP43538 392 aa2.54□□□□□ -2
VPS16YPL045W NOP9P47077 666 aaKnown RBP2.54□□□□□ -2
VPS16YPL045W NCS6P53088 359 aa2.54□□□□□ -2
VPS16YPL045W GTF1P53260 183 aaPredicted RBP2.54□□□□□ -2
VPS16YPL045W YGR250CP53316 781 aaKnown RBP2.54□□□□□ -2
VPS16YPL045W ATG21Q02887 496 aa2.54□□□□□ -2
VPS16YPL045W GPB1Q08886 897 aa2.54□□□□□ -2
VPS16YPL045W ZRT2Q12436 422 aa2.54□□□□□ -2
VPS16YPL045W POM34Q12445 299 aa2.54□□□□□ -2
VPS16YPL045W ECM3Q99252 613 aa2.54□□□□□ -2
VPS16YPL045W YCF1P39109 1515 aaKnown RBP2.54□□□□□ -2
VPS16YPL045W TPK1P06244 397 aa2.54□□□□□ -2
VPS16YPL045W CKA1P15790 372 aa2.54□□□□□ -2
VPS16YPL045W SAC6P32599 642 aaKnown RBP2.54□□□□□ -2
VPS16YPL045W PGM1P33401 570 aaKnown RBP2.54□□□□□ -2
VPS16YPL045W MAC1P35192 417 aa2.54□□□□□ -2
VPS16YPL045W BYE1P36106 594 aa2.54□□□□□ -2
VPS16YPL045W APT2P36973 181 aa2.54□□□□□ -2
VPS16YPL045W SFB3P38810 929 aa2.54□□□□□ -2
VPS16YPL045W APE4P38821 490 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 94.2 ms