RNA–Protein interactions for RNA: YOR259C

RPT4, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT4YOR259C SDS3P40505 327 aa5.63□□□□□ -1.51
RPT4YOR259C LSB6P42951 607 aa5.63□□□□□ -1.51
RPT4YOR259C MCM6P53091 1017 aaKnown RBP5.63□□□□□ -1.51
RPT4YOR259C HOP2P53187 214 aa5.63□□□□□ -1.51
RPT4YOR259C YNR065CP53751 1116 aa5.63□□□□□ -1.51
RPT4YOR259C UBX4P54730 416 aa5.63□□□□□ -1.51
RPT4YOR259C MTG1Q03151 367 aaPredicted RBP5.63□□□□□ -1.51
RPT4YOR259C ARO80Q04052 950 aa5.63□□□□□ -1.51
RPT4YOR259C YDR278CQ05612 105 aa5.63□□□□□ -1.51
RPT4YOR259C RSA3Q05942 220 aaKnown RBP5.63□□□□□ -1.51
RPT4YOR259C FAL1Q12099 399 aaKnown RBP5.63□□□□□ -1.51
RPT4YOR259C CFT2Q12102 859 aaPredicted RBP5.63□□□□□ -1.51
RPT4YOR259C RPL24AP04449 155 aaKnown RBP5.62□□□□□ -1.51
RPT4YOR259C ILV2P07342 687 aaKnown RBP5.62□□□□□ -1.51
RPT4YOR259C SAC7P17121 654 aa5.62□□□□□ -1.51
RPT4YOR259C PUF4P25339 888 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
RPT4YOR259C EUG1P32474 517 aa5.62□□□□□ -1.51
RPT4YOR259C MRE11P32829 692 aa5.62□□□□□ -1.51
RPT4YOR259C PGM1P33401 570 aaKnown RBP5.62□□□□□ -1.51
RPT4YOR259C UBP11P36026 717 aa5.62□□□□□ -1.51
RPT4YOR259C CCL1P37366 393 aa5.62□□□□□ -1.51
RPT4YOR259C EXO5P38289 585 aa5.62□□□□□ -1.51
RPT4YOR259C YBP1P38315 674 aa5.62□□□□□ -1.51
RPT4YOR259C HSM3P38348 480 aa5.62□□□□□ -1.51
RPT4YOR259C MMS21P38632 267 aa5.62□□□□□ -1.51
RPT4YOR259C END3P39013 349 aa5.62□□□□□ -1.51
RPT4YOR259C SPC72P39723 622 aa5.62□□□□□ -1.51
RPT4YOR259C GPD2P41911 440 aaKnown RBP5.62□□□□□ -1.51
RPT4YOR259C COS5P47187 383 aa5.62□□□□□ -1.51
RPT4YOR259C COS6P53344 381 aa5.62□□□□□ -1.51
RPT4YOR259C DIP5P53388 608 aa5.62□□□□□ -1.51
RPT4YOR259C PTA1Q01329 785 aaPredicted RBP5.62□□□□□ -1.51
RPT4YOR259C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
RPT4YOR259C FUS2Q05670 677 aa5.62□□□□□ -1.51
RPT4YOR259C YPL277CQ08989 487 aa5.62□□□□□ -1.51
RPT4YOR259C TY1B-AO13527 1196 aaKnown RBP5.61□□□□□ -1.51
RPT4YOR259C PGK1P00560 416 aaKnown RBP5.61□□□□□ -1.51
RPT4YOR259C PEP5P12868 1029 aa5.61□□□□□ -1.51
RPT4YOR259C TAL1P15019 335 aaKnown RBP5.61□□□□□ -1.51
RPT4YOR259C CBF1P17106 351 aa5.61□□□□□ -1.51
RPT4YOR259C CAP1P28495 268 aaKnown RBP5.61□□□□□ -1.51
RPT4YOR259C CBF2P32504 956 aa5.61□□□□□ -1.51
RPT4YOR259C YEL1P34225 687 aa5.61□□□□□ -1.51
RPT4YOR259C RRP14P36080 434 aaKnown RBP5.61□□□□□ -1.51
RPT4YOR259C ECM4P36156 370 aa5.61□□□□□ -1.51
RPT4YOR259C TRZ1P36159 838 aaPredicted RBP5.61□□□□□ -1.51
RPT4YOR259C YBR032WP38223 100 aa5.61□□□□□ -1.51
RPT4YOR259C RFC3P38629 340 aa5.61□□□□□ -1.51
RPT4YOR259C YHL008CP38750 627 aa5.61□□□□□ -1.51
RPT4YOR259C STN1P38960 494 aa5.61□□□□□ -1.51
RPT4YOR259C SCS2P40075 244 aaKnown RBP5.61□□□□□ -1.51
RPT4YOR259C SIP5P40210 489 aaKnown RBP5.61□□□□□ -1.51
RPT4YOR259C NUP82P40368 713 aa5.61□□□□□ -1.51
RPT4YOR259C NEO1P40527 1151 aa5.61□□□□□ -1.51
RPT4YOR259C ULP2P40537 1034 aaPredicted RBP5.61□□□□□ -1.51
RPT4YOR259C TAF6P53040 516 aa5.61□□□□□ -1.51
RPT4YOR259C YGL039WP53183 348 aaKnown RBP5.61□□□□□ -1.51
RPT4YOR259C YGR125WP53273 1036 aa5.61□□□□□ -1.51
RPT4YOR259C CNM67P53865 581 aaKnown RBP5.61□□□□□ -1.51
RPT4YOR259C ESBP6P53918 673 aa5.61□□□□□ -1.51
RPT4YOR259C HAS1Q03532 505 aaKnown RBP5.61□□□□□ -1.51
RPT4YOR259C MSH6Q03834 1242 aa5.61□□□□□ -1.51
RPT4YOR259C SPO71Q03868 1245 aa5.61□□□□□ -1.51
RPT4YOR259C PHM6Q05637 104 aa5.61□□□□□ -1.51
RPT4YOR259C ISA1Q07821 250 aaPredicted RBP5.61□□□□□ -1.51
RPT4YOR259C VHS3Q08438 674 aa5.61□□□□□ -1.51
RPT4YOR259C CDC53Q12018 815 aaKnown RBP5.61□□□□□ -1.51
RPT4YOR259C RUP1Q12242 671 aa5.61□□□□□ -1.51
RPT4YOR259C TY1A-NL1Q12391 440 aaKnown RBP5.61□□□□□ -1.51
RPT4YOR259C YPT6Q99260 215 aa5.61□□□□□ -1.51
RPT4YOR259C FLP1P03870 423 aa5.6□□□□□ -1.51
RPT4YOR259C CMD1P06787 147 aaKnown RBP5.6□□□□□ -1.51
RPT4YOR259C GCR1P07261 785 aa5.6□□□□□ -1.51
RPT4YOR259C SRD1P09007 221 aa5.6□□□□□ -1.51
RPT4YOR259C CHS2P14180 963 aa5.6□□□□□ -1.51
RPT4YOR259C TYR1P20049 452 aa5.6□□□□□ -1.51
RPT4YOR259C TKL1P23254 680 aaKnown RBP5.6□□□□□ -1.51
RPT4YOR259C MRPL25P23369 157 aa5.6□□□□□ -1.51
RPT4YOR259C PRP22P24384 1145 aaKnown RBP5.6□□□□□ -1.51
RPT4YOR259C SPS22P25380 463 aa5.6□□□□□ -1.51
RPT4YOR259C RPC19P28000 142 aaKnown RBP5.6□□□□□ -1.51
RPT4YOR259C DBF4P32325 704 aa5.6□□□□□ -1.51
RPT4YOR259C DUR3P33413 735 aa5.6□□□□□ -1.51
RPT4YOR259C SEC66P33754 206 aa5.6□□□□□ -1.51
RPT4YOR259C SEG2P34250 1132 aa5.6□□□□□ -1.51
RPT4YOR259C RIM11P38615 370 aa5.6□□□□□ -1.51
RPT4YOR259C BEM4P39011 633 aa5.6□□□□□ -1.51
RPT4YOR259C YAF9P53930 226 aa5.6□□□□□ -1.51
RPT4YOR259C RPL22BP56628 122 aaKnown RBP5.6□□□□□ -1.51
RPT4YOR259C YPL034WQ03083 165 aa5.6□□□□□ -1.51
RPT4YOR259C ERV41Q04651 352 aa5.6□□□□□ -1.51
RPT4YOR259C ERP3Q12403 225 aa5.6□□□□□ -1.51
RPT4YOR259C CMR1Q12510 522 aaKnown RBP5.6□□□□□ -1.51
RPT4YOR259C SNF1P06782 633 aaKnown RBP5.59□□□□□ -1.51
RPT4YOR259C RPL5P26321 297 aaKnown RBP5.59□□□□□ -1.51
RPT4YOR259C TRM2P33753 639 aa5.59□□□□□ -1.51
RPT4YOR259C APE3P37302 537 aaKnown RBP5.59□□□□□ -1.51
RPT4YOR259C PPX1P38698 397 aa5.59□□□□□ -1.51
RPT4YOR259C ETP1P38748 585 aaKnown RBP5.59□□□□□ -1.51
RPT4YOR259C OAF1P39720 1047 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms