RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W YIH1P25637 258 aa15□□□□□ -0.01
SHR5YOL110W HSP78P33416 811 aa15□□□□□ -0.01
SHR5YOL110W POP4P38336 279 aa15□□□□□ -0.01
SHR5YOL110W PRM9P39551 298 aa15□□□□□ -0.01
SHR5YOL110W MKT1P40850 830 aaKnown RBP15□□□□□ -0.01
SHR5YOL110W YNL320WP42840 284 aa15□□□□□ -0.01
SHR5YOL110W UTP8P53276 713 aaKnown RBP15□□□□□ -0.01
SHR5YOL110W COP1P53622 1201 aaKnown RBP15□□□□□ -0.01
SHR5YOL110W INA17Q02888 182 aa15□□□□□ -0.01
SHR5YOL110W PIG1Q06216 648 aa15□□□□□ -0.01
SHR5YOL110W SPO16P17122 198 aa14.99□□□□□ -0.01
SHR5YOL110W RAD16P31244 790 aa14.99□□□□□ -0.01
SHR5YOL110W LAS1P36146 502 aaPredicted RBP14.99□□□□□ -0.01
SHR5YOL110W MIC19P43594 170 aa14.99□□□□□ -0.01
SHR5YOL110W YJL045WP47052 634 aa14.99□□□□□ -0.01
SHR5YOL110W SPE3Q12074 293 aaKnown RBP14.99□□□□□ -0.01
SHR5YOL110W NDJ1Q12366 352 aa14.99□□□□□ -0.01
SHR5YOL110W YCR015CP25616 317 aa14.98□□□□□ -0.01
SHR5YOL110W SPP381P38282 291 aaPredicted RBP14.98□□□□□ -0.01
SHR5YOL110W ATG36P46983 293 aa14.98□□□□□ -0.01
SHR5YOL110W MNN11P46985 422 aaKnown RBP14.98□□□□□ -0.01
SHR5YOL110W HXT3P32466 567 aaKnown RBP14.97□□□□□ -0.01
SHR5YOL110W FSH1P38777 243 aaKnown RBP14.97□□□□□ -0.01
SHR5YOL110W ALY2P47029 1046 aa14.97□□□□□ -0.01
SHR5YOL110W YNL144CP53907 740 aa14.97□□□□□ -0.01
SHR5YOL110W ACM1Q08981 209 aa14.97□□□□□ -0.01
SHR5YOL110W YLL056CQ12177 298 aa14.97□□□□□ -0.01
SHR5YOL110W SVS1Q12254 260 aa14.97□□□□□ -0.01
SHR5YOL110W HMG2P12684 1045 aa14.96□□□□□ -0.01
SHR5YOL110W MET16P18408 261 aaPredicted RBP14.96□□□□□ -0.01
SHR5YOL110W PLC1P32383 869 aa14.96□□□□□ -0.01
SHR5YOL110W ECM13P38195 257 aa14.96□□□□□ -0.01
SHR5YOL110W DIA4P38705 446 aaPredicted RBP14.96□□□□□ -0.01
SHR5YOL110W SFB3P38810 929 aa14.96□□□□□ -0.01
SHR5YOL110W LAM1P38851 1228 aa14.96□□□□□ -0.01
SHR5YOL110W AIM18P38884 321 aa14.96□□□□□ -0.01
SHR5YOL110W NUP60P39705 539 aa14.96□□□□□ -0.01
SHR5YOL110W RRT5P43607 289 aa14.96□□□□□ -0.01
SHR5YOL110W RFX1P48743 811 aa14.96□□□□□ -0.01
SHR5YOL110W PSP1P50896 841 aaKnown RBP14.96□□□□□ -0.01
SHR5YOL110W GPI10P30777 616 aa14.95□□□□□ -0.02
SHR5YOL110W INA22P40576 216 aa14.95□□□□□ -0.02
SHR5YOL110W VPS9P54787 451 aa14.95□□□□□ -0.02
SHR5YOL110W PUF2Q12221 1075 aaKnown RBP RIP-Chip data14.95□□□□□ -0.02not detected
SHR5YOL110W YML002WP0CF17 737 aa14.94□□□□□ -0.02
SHR5YOL110W MTF1P14908 341 aaKnown RBP14.94□□□□□ -0.02
SHR5YOL110W LTV1P34078 463 aa14.94□□□□□ -0.02
SHR5YOL110W SAF1P38352 637 aa14.94□□□□□ -0.02
SHR5YOL110W PEX28P38848 579 aa14.94□□□□□ -0.02
SHR5YOL110W CKB2P38930 258 aa14.94□□□□□ -0.02
SHR5YOL110W CNN1P43618 361 aa14.94□□□□□ -0.02
SHR5YOL110W ARA2Q04212 335 aa14.94□□□□□ -0.02
SHR5YOL110W LCB4Q12246 624 aa14.94□□□□□ -0.02
SHR5YOL110W EFG1Q3E705 233 aaKnown RBP14.94□□□□□ -0.02
SHR5YOL110W SEY1Q99287 776 aa14.94□□□□□ -0.02
SHR5YOL110W HIS1P00498 297 aaKnown RBP14.93□□□□□ -0.02
SHR5YOL110W CDC24P11433 854 aaPredicted RBP14.93□□□□□ -0.02
SHR5YOL110W RPC37P36121 282 aa14.93□□□□□ -0.02
SHR5YOL110W BIT2P38346 545 aa14.93□□□□□ -0.02
SHR5YOL110W RTT101P47050 842 aa14.93□□□□□ -0.02
SHR5YOL110W YJR079WP47126 109 aa14.93□□□□□ -0.02
SHR5YOL110W YPQ1Q12010 308 aa14.93□□□□□ -0.02
SHR5YOL110W GPM3Q12326 303 aa14.93□□□□□ -0.02
SHR5YOL110W GCR1P07261 785 aa14.92□□□□□ -0.02
SHR5YOL110W PEP5P12868 1029 aa14.92□□□□□ -0.02
SHR5YOL110W MGT1P26188 188 aa14.92□□□□□ -0.02
SHR5YOL110W COQ8P27697 501 aa14.92□□□□□ -0.02
SHR5YOL110W PSE1P32337 1089 aaKnown RBP14.92□□□□□ -0.02
SHR5YOL110W RAD5P32849 1169 aaPredicted RBP14.92□□□□□ -0.02
SHR5YOL110W STL1P39932 569 aa14.92□□□□□ -0.02
SHR5YOL110W MND2P40577 368 aa14.92□□□□□ -0.02
SHR5YOL110W UFE1P41834 346 aa14.92□□□□□ -0.02
SHR5YOL110W YJL132WP47014 750 aa14.92□□□□□ -0.02
SHR5YOL110W YGR127WP53275 312 aa14.92□□□□□ -0.02
SHR5YOL110W GRX8Q05926 109 aa14.92□□□□□ -0.02
SHR5YOL110W CDC73Q06697 393 aa14.92□□□□□ -0.02
SHR5YOL110W LPX1Q12405 387 aaKnown RBP14.92□□□□□ -0.02
SHR5YOL110W QCR6P00127 147 aa14.91□□□□□ -0.02
SHR5YOL110W ENO2P00925 437 aaKnown RBP14.91□□□□□ -0.02
SHR5YOL110W PEX34P25584 144 aa14.91□□□□□ -0.02
SHR5YOL110W DUG2P38149 878 aa14.91□□□□□ -0.02
SHR5YOL110W URA8P38627 578 aaPredicted RBP14.91□□□□□ -0.02
SHR5YOL110W EDC3P39998 551 aaKnown RBP14.91□□□□□ -0.02
SHR5YOL110W MOB1P40484 314 aa14.91□□□□□ -0.02
SHR5YOL110W YJR039WP47107 1121 aa14.91□□□□□ -0.02
SHR5YOL110W RSM26P47141 266 aa14.91□□□□□ -0.02
SHR5YOL110W TCB2P48231 1178 aa14.91□□□□□ -0.02
SHR5YOL110W PIR3Q03180 325 aa14.91□□□□□ -0.02
SHR5YOL110W BSP1Q06604 576 aa14.91□□□□□ -0.02
SHR5YOL110W RRD2Q12461 358 aa14.91□□□□□ -0.02
SHR5YOL110W NSE5Q03718 556 aa14.9□□□□□ -0.02
SHR5YOL110W AVL9Q12500 764 aa14.9□□□□□ -0.02
SHR5YOL110W ADY2P25613 283 aa14.89□□□□□ -0.03
SHR5YOL110W OTU2P38747 307 aaKnown RBP14.89□□□□□ -0.03
SHR5YOL110W YEL028WP39989 153 aa14.89□□□□□ -0.03
SHR5YOL110W OYE3P41816 400 aaPredicted RBP14.89□□□□□ -0.03
SHR5YOL110W EMW1P42842 904 aaKnown RBP14.89□□□□□ -0.03
SHR5YOL110W PCL10P53124 433 aa14.89□□□□□ -0.03
SHR5YOL110W CPR6P53691 371 aaKnown RBP14.89□□□□□ -0.03
SHR5YOL110W NMA111P53920 997 aa14.89□□□□□ -0.03
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms