RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C RRP36Q12481 300 aaPredicted RBP8.87□□□□□ -0.99
RPD3YNL330C ZPS1Q12512 249 aa8.87□□□□□ -0.99
RPD3YNL330C MST1P07236 462 aa8.86□□□□□ -0.99
RPD3YNL330C SNA3P14359 133 aa8.86□□□□□ -0.99
RPD3YNL330C VBA3P25594 458 aa8.86□□□□□ -0.99
RPD3YNL330C PRR1P28708 518 aa8.86□□□□□ -0.99
RPD3YNL330C SRB2P34162 210 aa8.86□□□□□ -0.99
RPD3YNL330C CUE2P36075 443 aaKnown RBP8.86□□□□□ -0.99
RPD3YNL330C VBA5P36172 582 aa8.86□□□□□ -0.99
RPD3YNL330C TSC10P38342 320 aa8.86□□□□□ -0.99
RPD3YNL330C YHR054CP38780 354 aa8.86□□□□□ -0.99
RPD3YNL330C RSC30P38781 883 aa8.86□□□□□ -0.99
RPD3YNL330C LYS9P38999 446 aa8.86□□□□□ -0.99
RPD3YNL330C YJL206CP39529 758 aa8.86□□□□□ -0.99
RPD3YNL330C GEM1P39722 662 aa8.86□□□□□ -0.99
RPD3YNL330C PEP8P40335 379 aa8.86□□□□□ -0.99
RPD3YNL330C SEC27P41811 889 aaKnown RBP8.86□□□□□ -0.99
RPD3YNL330C ARC1P46672 376 aaKnown RBP8.86□□□□□ -0.99
RPD3YNL330C YJR054WP47114 497 aa8.86□□□□□ -0.99
RPD3YNL330C MCM6P53091 1017 aaKnown RBP8.86□□□□□ -0.99
RPD3YNL330C ARI1P53111 347 aaKnown RBP8.86□□□□□ -0.99
RPD3YNL330C ACL4Q03771 387 aa8.86□□□□□ -0.99
RPD3YNL330C TPO1Q07824 586 aa8.86□□□□□ -0.99
RPD3YNL330C MSC6Q08818 692 aaKnown RBP8.86□□□□□ -0.99
RPD3YNL330C THI21Q08975 551 aa8.86□□□□□ -0.99
RPD3YNL330C TIF1P10081 395 aaKnown RBP8.85□□□□□ -0.99
RPD3YNL330C WHI2P12611 486 aa8.85□□□□□ -0.99
RPD3YNL330C SNT1P25357 1226 aa8.85□□□□□ -0.99
RPD3YNL330C URA10P30402 227 aa8.85□□□□□ -0.99
RPD3YNL330C PYC2P32327 1180 aaKnown RBP8.85□□□□□ -0.99
RPD3YNL330C SMY2P32909 740 aaKnown RBP8.85□□□□□ -0.99
RPD3YNL330C NUP120P35729 1037 aa8.85□□□□□ -0.99
RPD3YNL330C APN2P38207 520 aa8.85□□□□□ -0.99
RPD3YNL330C RPT2P40327 437 aaKnown RBP8.85□□□□□ -0.99
RPD3YNL330C HOS4P40480 1083 aa8.85□□□□□ -0.99
RPD3YNL330C MND2P40577 368 aa8.85□□□□□ -0.99
RPD3YNL330C ULI1P43604 169 aa8.85□□□□□ -0.99
RPD3YNL330C TEP1P53916 434 aa8.85□□□□□ -0.99
RPD3YNL330C NOP15P53927 220 aaPredicted RBP8.85□□□□□ -0.99
RPD3YNL330C OSH6Q02201 448 aa8.85□□□□□ -0.99
RPD3YNL330C ELP3Q02908 557 aaKnown RBP8.85□□□□□ -0.99
RPD3YNL330C MZM1Q03429 123 aaPredicted RBP8.85□□□□□ -0.99
RPD3YNL330C RKM2Q03942 479 aa8.85□□□□□ -0.99
RPD3YNL330C YSH1Q06224 779 aaPredicted RBP8.85□□□□□ -0.99
RPD3YNL330C YPR027CQ12079 277 aa8.85□□□□□ -0.99
RPD3YNL330C AMS1P22855 1083 aa8.84□□□□□ -0.99
RPD3YNL330C HES1P35843 434 aa8.84□□□□□ -0.99
RPD3YNL330C KES1P35844 434 aaKnown RBP8.84□□□□□ -0.99
RPD3YNL330C RIM2P38127 377 aa8.84□□□□□ -0.99
RPD3YNL330C PNT1P38969 423 aa8.84□□□□□ -0.99
RPD3YNL330C STL1P39932 569 aa8.84□□□□□ -0.99
RPD3YNL330C DIM1P41819 318 aaKnown RBP8.84□□□□□ -0.99
RPD3YNL330C SUM1P46676 1062 aa8.84□□□□□ -0.99
RPD3YNL330C POL31P46957 487 aa8.84□□□□□ -0.99
RPD3YNL330C FMP33P46998 180 aa8.84□□□□□ -0.99
RPD3YNL330C YPR003CP53394 754 aa8.84□□□□□ -0.99
RPD3YNL330C YNL058CP53947 316 aa8.84□□□□□ -0.99
RPD3YNL330C BCP1Q06338 283 aa8.84□□□□□ -0.99
RPD3YNL330C DIS3Q08162 1001 aaKnown RBP8.84□□□□□ -0.99
RPD3YNL330C MDM38Q08179 573 aa8.84□□□□□ -0.99
RPD3YNL330C YIG1Q08956 461 aa8.84□□□□□ -0.99
RPD3YNL330C RTP1Q12751 981 aa8.84□□□□□ -0.99
RPD3YNL330C IZH4Q99393 312 aa8.84□□□□□ -0.99
RPD3YNL330C MPH2P0CD99 609 aa8.83□□□□□ -1
RPD3YNL330C TSR4P25040 408 aa8.83□□□□□ -1
RPD3YNL330C RPL5P26321 297 aaKnown RBP8.83□□□□□ -1
RPD3YNL330C RAD14P28519 371 aa8.83□□□□□ -1
RPD3YNL330C RIF1P29539 1916 aa8.83□□□□□ -1
RPD3YNL330C DGR2P32330 852 aa8.83□□□□□ -1
RPD3YNL330C YSC84P32793 468 aa8.83□□□□□ -1
RPD3YNL330C TIM23P32897 222 aa8.83□□□□□ -1
RPD3YNL330C SIP2P34164 415 aaKnown RBP8.83□□□□□ -1
RPD3YNL330C TGL4P36165 910 aa8.83□□□□□ -1
RPD3YNL330C TRM5P38793 499 aa8.83□□□□□ -1
RPD3YNL330C DPH1P40487 425 aaKnown RBP8.83□□□□□ -1
RPD3YNL330C MAD3P47074 515 aa8.83□□□□□ -1
RPD3YNL330C RFX1P48743 811 aa8.83□□□□□ -1
RPD3YNL330C NMA111P53920 997 aa8.83□□□□□ -1
RPD3YNL330C CWC21Q03375 135 aaKnown RBP8.83□□□□□ -1
RPD3YNL330C TVP15Q03860 143 aa8.83□□□□□ -1
RPD3YNL330C MEU1Q07938 337 aaKnown RBP RIP-Chip data8.83□□□□□ -1not detected
RPD3YNL330C PEX15Q08215 383 aa8.83□□□□□ -1
RPD3YNL330C TAF3Q12297 353 aa8.83□□□□□ -1
RPD3YNL330C NKP1Q12493 238 aa8.83□□□□□ -1
RPD3YNL330C KCS1Q12494 1050 aa8.83□□□□□ -1
RPD3YNL330C CHS1P08004 1131 aa8.82□□□□□ -1
RPD3YNL330C DPH5P32469 300 aaPredicted RBP8.82□□□□□ -1
RPD3YNL330C RRN3P36070 627 aa8.82□□□□□ -1
RPD3YNL330C RRP14P36080 434 aaKnown RBP8.82□□□□□ -1
RPD3YNL330C IML2P47031 731 aa8.82□□□□□ -1
RPD3YNL330C YGR283CP53336 341 aaPredicted RBP8.82□□□□□ -1
RPD3YNL330C TAF11Q04226 346 aa8.82□□□□□ -1
RPD3YNL330C YKU80Q04437 629 aa8.82□□□□□ -1
RPD3YNL330C DIA2Q08496 732 aaPredicted RBP8.82□□□□□ -1
RPD3YNL330C SNX3Q08826 162 aaKnown RBP8.82□□□□□ -1
RPD3YNL330C YPR202WQ08993 238 aa8.82□□□□□ -1
RPD3YNL330C VPS54Q12071 889 aa8.82□□□□□ -1
RPD3YNL330C HOS1Q12214 470 aa8.82□□□□□ -1
RPD3YNL330C LAA1P39526 2014 aa8.82□□□□□ -1
RPD3YNL330C ERR1P0CX10 437 aa8.81□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms