RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W TMA108P40462 946 aa7.95□□□□□ -1.14
NUP53YMR153W YMR1P47147 688 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14not detected
NUP53YMR153W PYK2P52489 506 aaKnown RBP7.95□□□□□ -1.14
NUP53YMR153W PEX31P53203 462 aa7.95□□□□□ -1.14
NUP53YMR153W BET4Q00618 327 aa7.95□□□□□ -1.14
NUP53YMR153W NDD1Q08887 554 aa7.95□□□□□ -1.14
NUP53YMR153W TOR1P35169 2470 aa7.94□□□□□ -1.14
NUP53YMR153W RAD3P06839 778 aa7.94□□□□□ -1.14
NUP53YMR153W HSF1P10961 833 aa7.94□□□□□ -1.14
NUP53YMR153W DUN1P39009 513 aa7.94□□□□□ -1.14
NUP53YMR153W YMR124WP39523 943 aaKnown RBP7.94□□□□□ -1.14
NUP53YMR153W TMN3P40071 706 aa7.94□□□□□ -1.14
NUP53YMR153W YIL054WP40524 105 aa7.94□□□□□ -1.14
NUP53YMR153W RSM7P47150 247 aa7.94□□□□□ -1.14
NUP53YMR153W FLC3P53121 802 aa7.94□□□□□ -1.14
NUP53YMR153W SMA1Q02651 245 aa7.94□□□□□ -1.14
NUP53YMR153W SXM1Q04175 944 aaKnown RBP7.94□□□□□ -1.14
NUP53YMR153W YSH1Q06224 779 aaPredicted RBP7.94□□□□□ -1.14
NUP53YMR153W YPR148CQ06523 435 aa7.94□□□□□ -1.14
NUP53YMR153W PEX15Q08215 383 aa7.94□□□□□ -1.14
NUP53YMR153W THI21Q08975 551 aa7.94□□□□□ -1.14
NUP53YMR153W HIS1P00498 297 aaKnown RBP7.93□□□□□ -1.14
NUP53YMR153W EST1P17214 699 aaPredicted RBP7.93□□□□□ -1.14
NUP53YMR153W SPC110P32380 944 aa7.93□□□□□ -1.14
NUP53YMR153W ABD1P32783 436 aaPredicted RBP7.93□□□□□ -1.14
NUP53YMR153W LAM1P38851 1228 aa7.93□□□□□ -1.14
NUP53YMR153W PRM9P39551 298 aa7.93□□□□□ -1.14
NUP53YMR153W ATG3P40344 310 aa7.93□□□□□ -1.14
NUP53YMR153W EMW1P42842 904 aaKnown RBP7.93□□□□□ -1.14
NUP53YMR153W SND1Q04007 877 aa7.93□□□□□ -1.14
NUP53YMR153W ARA2Q04212 335 aa7.93□□□□□ -1.14
NUP53YMR153W RSB1Q08417 382 aa7.93□□□□□ -1.14
NUP53YMR153W FSH1P38777 243 aaKnown RBP7.92□□□□□ -1.14
NUP53YMR153W EXO1P39875 702 aa7.92□□□□□ -1.14
NUP53YMR153W VAC8P39968 578 aa7.92□□□□□ -1.14
NUP53YMR153W EDC3P39998 551 aaKnown RBP7.92□□□□□ -1.14
NUP53YMR153W JJJ1P53863 590 aa7.92□□□□□ -1.14
NUP53YMR153W ADI1Q03677 179 aa7.92□□□□□ -1.14
NUP53YMR153W YLR012CQ07927 99 aa7.92□□□□□ -1.14
NUP53YMR153W YPK1P12688 680 aaKnown RBP7.91□□□□□ -1.14
NUP53YMR153W TRX1P22217 103 aaKnown RBP7.91□□□□□ -1.14
NUP53YMR153W ADY2P25613 283 aa7.91□□□□□ -1.14
NUP53YMR153W KNS1P32350 737 aaPredicted RBP7.91□□□□□ -1.14
NUP53YMR153W MRPL40P36534 297 aa7.91□□□□□ -1.14
NUP53YMR153W SWC5P38326 303 aa7.91□□□□□ -1.14
NUP53YMR153W PCF11P39081 626 aaPredicted RBP7.91□□□□□ -1.14
NUP53YMR153W KHA1P40309 873 aa7.91□□□□□ -1.14
NUP53YMR153W STR2P47164 639 aa7.91□□□□□ -1.14
NUP53YMR153W PEX13P80667 386 aa7.91□□□□□ -1.14
NUP53YMR153W SYH1Q02875 849 aaKnown RBP7.91□□□□□ -1.14
NUP53YMR153W UTP5Q04177 643 aaKnown RBP7.91□□□□□ -1.14
NUP53YMR153W YMR018WQ04364 514 aa7.91□□□□□ -1.14
NUP53YMR153W ERV41Q04651 352 aa7.91□□□□□ -1.14
NUP53YMR153W LCB5Q06147 687 aaKnown RBP7.91□□□□□ -1.14
NUP53YMR153W YDL073WQ07454 984 aa7.91□□□□□ -1.14
NUP53YMR153W CIR2Q08822 631 aa7.91□□□□□ -1.14
NUP53YMR153W NEW1Q08972 1196 aaKnown RBP7.91□□□□□ -1.14
NUP53YMR153W SPO21Q12411 609 aa7.91□□□□□ -1.14
NUP53YMR153W MTF2P10849 440 aa7.9□□□□□ -1.14
NUP53YMR153W PYC1P11154 1178 aaKnown RBP7.9□□□□□ -1.14
NUP53YMR153W DAL81P21657 970 aa7.9□□□□□ -1.14
NUP53YMR153W RRP43P25359 394 aaPredicted RBP7.9□□□□□ -1.14
NUP53YMR153W ADD66P36040 267 aa7.9□□□□□ -1.14
NUP53YMR153W MIC60P36112 540 aa7.9□□□□□ -1.14
NUP53YMR153W SAK1P38990 1142 aa7.9□□□□□ -1.14
NUP53YMR153W PIK1P39104 1066 aa7.9□□□□□ -1.14
NUP53YMR153W MRX6P48564 524 aa7.9□□□□□ -1.14
NUP53YMR153W NPY1P53164 384 aa7.9□□□□□ -1.14
NUP53YMR153W YGR021WP53212 290 aa7.9□□□□□ -1.14
NUP53YMR153W YNL108CP53929 270 aa7.9□□□□□ -1.14
NUP53YMR153W ERG5P54781 538 aa7.9□□□□□ -1.14
NUP53YMR153W CDC55Q00362 526 aa7.9□□□□□ -1.14
NUP53YMR153W IVY1Q04934 453 aa7.9□□□□□ -1.14
NUP53YMR153W HPF1Q05164 967 aa7.9□□□□□ -1.14
NUP53YMR153W RPL40AP0CH08 128 aaKnown RBP7.89□□□□□ -1.15
NUP53YMR153W RPL40BP0CH09 128 aaKnown RBP7.89□□□□□ -1.15
NUP53YMR153W DBF4P32325 704 aa7.89□□□□□ -1.15
NUP53YMR153W PXA2P34230 853 aa7.89□□□□□ -1.15
NUP53YMR153W KAP104P38217 918 aaKnown RBP7.89□□□□□ -1.15
NUP53YMR153W HIS2P38635 335 aa7.89□□□□□ -1.15
NUP53YMR153W SRP68P38687 599 aaKnown RBP7.89□□□□□ -1.15
NUP53YMR153W CRP1P38845 465 aaKnown RBP7.89□□□□□ -1.15
NUP53YMR153W DAN4P47179 1161 aa7.89□□□□□ -1.15
NUP53YMR153W NUP84P52891 726 aa7.89□□□□□ -1.15
NUP53YMR153W YNR063WP53749 607 aa7.89□□□□□ -1.15
NUP53YMR153W TDA7P53882 636 aaPredicted RBP7.89□□□□□ -1.15
NUP53YMR153W YNL040WP53960 456 aaPredicted RBP7.89□□□□□ -1.15
NUP53YMR153W CLU1Q03690 1277 aaKnown RBP7.89□□□□□ -1.15
NUP53YMR153W JIP5Q06214 492 aaPredicted RBP7.89□□□□□ -1.15
NUP53YMR153W CLP1Q08685 445 aaPredicted RBP7.89□□□□□ -1.15
NUP53YMR153W APL4Q12028 832 aa7.89□□□□□ -1.15
NUP53YMR153W ADE3P07245 946 aaKnown RBP7.88□□□□□ -1.15
NUP53YMR153W YJU3P28321 313 aa7.88□□□□□ -1.15
NUP53YMR153W SET5P38890 526 aaKnown RBP7.88□□□□□ -1.15
NUP53YMR153W SPC72P39723 622 aa7.88□□□□□ -1.15
NUP53YMR153W STL1P39932 569 aa7.88□□□□□ -1.15
NUP53YMR153W YJR061WP40355 935 aa7.88□□□□□ -1.15
NUP53YMR153W SNG1P46950 547 aa7.88□□□□□ -1.15
NUP53YMR153W AIM23P47015 356 aa7.88□□□□□ -1.15
NUP53YMR153W AMA1P50082 593 aa7.88□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms