RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C SLX8P40072 274 aa5.08□□□□□ -1.6
NUP116YMR047C RIO2P40160 425 aaKnown RBP5.08□□□□□ -1.6
NUP116YMR047C HSH155P49955 971 aaKnown RBP5.08□□□□□ -1.6
NUP116YMR047C FDC1Q03034 503 aa5.08□□□□□ -1.6
NUP116YMR047C GAC1P28006 793 aa5.07□□□□□ -1.6
NUP116YMR047C YNR061CP53747 219 aa5.07□□□□□ -1.6
NUP116YMR047C CWC21Q03375 135 aaKnown RBP5.07□□□□□ -1.6
NUP116YMR047C SNU56Q03782 492 aaKnown RBP5.07□□□□□ -1.6
NUP116YMR047C GAL10P04397 699 aa5.07□□□□□ -1.6
NUP116YMR047C MAS1P10507 462 aa5.07□□□□□ -1.6
NUP116YMR047C RNR1P21524 888 aaKnown RBP5.07□□□□□ -1.6
NUP116YMR047C MRP4P32902 394 aa5.07□□□□□ -1.6
NUP116YMR047C PXA2P34230 853 aa5.07□□□□□ -1.6
NUP116YMR047C GCS1P35197 352 aa5.07□□□□□ -1.6
NUP116YMR047C ECM4P36156 370 aa5.07□□□□□ -1.6
NUP116YMR047C PXL1P36166 706 aa5.07□□□□□ -1.6
NUP116YMR047C DCP2P53550 970 aaKnown RBP5.07□□□□□ -1.6
NUP116YMR047C HPF1Q05164 967 aa5.07□□□□□ -1.6
NUP116YMR047C ECM22Q05958 814 aaPredicted RBP5.07□□□□□ -1.6
NUP116YMR047C YPQ2Q06328 317 aa5.07□□□□□ -1.6
NUP116YMR047C SAT4P25333 603 aaKnown RBP5.07□□□□□ -1.6
NUP116YMR047C RGA1P39083 1007 aa5.07□□□□□ -1.6
NUP116YMR047C YFL066CP43538 392 aa5.07□□□□□ -1.6
NUP116YMR047C STE20Q03497 939 aaKnown RBP5.07□□□□□ -1.6
NUP116YMR047C NOP12Q08208 459 aaKnown RBP5.07□□□□□ -1.6
NUP116YMR047C PPR1P07272 904 aaPredicted RBP5.06□□□□□ -1.6
NUP116YMR047C HOM2P13663 365 aaKnown RBP5.06□□□□□ -1.6
NUP116YMR047C OM45P16547 393 aa5.06□□□□□ -1.6
NUP116YMR047C FRE1P32791 686 aa5.06□□□□□ -1.6
NUP116YMR047C TRZ1P36159 838 aaPredicted RBP5.06□□□□□ -1.6
NUP116YMR047C GCD14P46959 383 aaPredicted RBP5.06□□□□□ -1.6
NUP116YMR047C VPS70P47161 811 aa5.06□□□□□ -1.6
NUP116YMR047C MND1P53102 219 aa5.06□□□□□ -1.6
NUP116YMR047C UTP8P53276 713 aaKnown RBP5.06□□□□□ -1.6
NUP116YMR047C SXM1Q04175 944 aaKnown RBP5.06□□□□□ -1.6
NUP116YMR047C MGR3Q04472 501 aa5.06□□□□□ -1.6
NUP116YMR047C DBP9Q06218 594 aaKnown RBP5.06□□□□□ -1.6
NUP116YMR047C SEN2P16658 377 aa5.06□□□□□ -1.6
NUP116YMR047C SPO11P23179 398 aa5.06□□□□□ -1.6
NUP116YMR047C PEX34P25584 144 aa5.06□□□□□ -1.6
NUP116YMR047C MRPL40P36534 297 aa5.06□□□□□ -1.6
NUP116YMR047C NUP60P39705 539 aa5.06□□□□□ -1.6
NUP116YMR047C SSN8P47821 323 aa5.06□□□□□ -1.6
NUP116YMR047C TOF2Q02208 771 aa5.06□□□□□ -1.6
NUP116YMR047C VAM6Q07468 1049 aa5.06□□□□□ -1.6
NUP116YMR047C CMS1Q07897 291 aaKnown RBP5.06□□□□□ -1.6
NUP116YMR047C CHS5Q12114 671 aaKnown RBP5.06□□□□□ -1.6
NUP116YMR047C RRP6Q12149 733 aaKnown RBP5.06□□□□□ -1.6
NUP116YMR047C ECM3Q99252 613 aa5.06□□□□□ -1.6
NUP116YMR047C ADH4P10127 382 aa5.05□□□□□ -1.6
NUP116YMR047C CHS2P14180 963 aa5.05□□□□□ -1.6
NUP116YMR047C LHS1P36016 881 aa5.05□□□□□ -1.6
NUP116YMR047C TOS3P43637 560 aa5.05□□□□□ -1.6
NUP116YMR047C PHO86P46956 311 aa5.05□□□□□ -1.6
NUP116YMR047C RNR4P49723 345 aaKnown RBP5.05□□□□□ -1.6
NUP116YMR047C YGR266WP53326 701 aa5.05□□□□□ -1.6
NUP116YMR047C TAF11Q04226 346 aa5.05□□□□□ -1.6
NUP116YMR047C SPP382Q06411 708 aaPredicted RBP5.05□□□□□ -1.6
NUP116YMR047C BUD7Q08754 746 aa5.05□□□□□ -1.6
NUP116YMR047C TRE1Q08919 783 aa5.05□□□□□ -1.6
NUP116YMR047C RIO1Q12196 484 aaKnown RBP5.05□□□□□ -1.6
NUP116YMR047C YRM1Q12340 786 aa5.05□□□□□ -1.6
NUP116YMR047C SPO21Q12411 609 aa5.05□□□□□ -1.6
NUP116YMR047C YER152CP10356 443 aa5.05□□□□□ -1.6
NUP116YMR047C RPL4AP10664 362 aaKnown RBP5.05□□□□□ -1.6
NUP116YMR047C AEP2P22136 580 aa5.05□□□□□ -1.6
NUP116YMR047C MRM1P25270 412 aa5.05□□□□□ -1.6
NUP116YMR047C GPI10P30777 616 aa5.05□□□□□ -1.6
NUP116YMR047C ATO2P32907 282 aa5.05□□□□□ -1.6
NUP116YMR047C HXT8P40886 569 aa5.05□□□□□ -1.6
NUP116YMR047C RPL4BP49626 362 aaKnown RBP5.05□□□□□ -1.6
NUP116YMR047C BIO5P53744 561 aaKnown RBP5.05□□□□□ -1.6
NUP116YMR047C TAF12Q03761 539 aa5.05□□□□□ -1.6
NUP116YMR047C GRX8Q05926 109 aa5.05□□□□□ -1.6
NUP116YMR047C LCB5Q06147 687 aaKnown RBP5.05□□□□□ -1.6
NUP116YMR047C TAO3P40468 2376 aa5.05□□□□□ -1.6
NUP116YMR047C HNM1P19807 563 aa5.05□□□□□ -1.6
NUP116YMR047C MRPS28P21771 286 aa5.05□□□□□ -1.6
NUP116YMR047C MIA40P36046 403 aa5.05□□□□□ -1.6
NUP116YMR047C MIC60P36112 540 aa5.05□□□□□ -1.6
NUP116YMR047C ADE17P38009 592 aaKnown RBP5.05□□□□□ -1.6
NUP116YMR047C YTA6P40328 754 aa5.05□□□□□ -1.6
NUP116YMR047C CPR7P47103 393 aa5.05□□□□□ -1.6
NUP116YMR047C FLC3P53121 802 aa5.05□□□□□ -1.6
NUP116YMR047C TMN2Q04562 672 aa5.05□□□□□ -1.6
NUP116YMR047C NNT1Q05874 261 aa5.05□□□□□ -1.6
NUP116YMR047C MLH2Q07980 695 aa5.05□□□□□ -1.6
NUP116YMR047C MEX67Q99257 599 aaKnown RBP5.05□□□□□ -1.6
NUP116YMR047C PPH22P23595 377 aa5.04□□□□□ -1.6
NUP116YMR047C PHO84P25297 587 aaKnown RBP5.04□□□□□ -1.6
NUP116YMR047C KRR1P25586 316 aaPredicted RBP5.04□□□□□ -1.6
NUP116YMR047C CDC15P27636 974 aa5.04□□□□□ -1.6
NUP116YMR047C VPH2P32341 215 aa5.04□□□□□ -1.6
NUP116YMR047C DUG2P38149 878 aa5.04□□□□□ -1.6
NUP116YMR047C YBR225WP38321 900 aa5.04□□□□□ -1.6
NUP116YMR047C SAK1P38990 1142 aa5.04□□□□□ -1.6
NUP116YMR047C NUP42P49686 430 aaKnown RBP5.04□□□□□ -1.6
NUP116YMR047C CDD1Q06549 142 aa5.04□□□□□ -1.6
NUP116YMR047C VPS36Q06696 566 aa5.04□□□□□ -1.6
NUP116YMR047C YAP7Q08182 245 aa5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms