RNA–Protein interactions for RNA: YLR180W

SAM1, Transcript of S-adenosylmethionine synthetase, yeast

Gene SAM1, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAM1	YLR180W	VEL1	P53058	206 aa		10.08	□□□□□ -0.8
SAM1	YLR180W	KAP114	P53067	1004 aa		10.08	□□□□□ -0.8
SAM1	YLR180W	FLC3	P53121	802 aa		10.08	□□□□□ -0.8
SAM1	YLR180W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	10.08	□□□□□ -0.8	not detected
SAM1	YLR180W	RTN1	Q04947	295 aa	Known RBP	10.08	□□□□□ -0.8
SAM1	YLR180W	HRD3	Q05787	833 aa		10.08	□□□□□ -0.8
SAM1	YLR180W	SIL1	Q08199	421 aa		10.08	□□□□□ -0.8
SAM1	YLR180W	CDC33	P07260	213 aa	Known RBP	10.07	□□□□□ -0.8
SAM1	YLR180W	NFU1	P32860	256 aa		10.07	□□□□□ -0.8
SAM1	YLR180W	TRZ1	P36159	838 aa	Predicted RBP	10.07	□□□□□ -0.8
SAM1	YLR180W	RCK2	P38623	610 aa		10.07	□□□□□ -0.8
SAM1	YLR180W	DUN1	P39009	513 aa		10.07	□□□□□ -0.8
SAM1	YLR180W	SPC72	P39723	622 aa		10.07	□□□□□ -0.8
SAM1	YLR180W	RRB1	Q04225	511 aa	Known RBP	10.07	□□□□□ -0.8
SAM1	YLR180W	ERV41	Q04651	352 aa		10.07	□□□□□ -0.8
SAM1	YLR180W	RTK1	Q12100	620 aa	Predicted RBP	10.07	□□□□□ -0.8
SAM1	YLR180W	RPS3	P05750	240 aa	Known RBP	10.06	□□□□□ -0.8
SAM1	YLR180W	ERG11	P10614	530 aa		10.06	□□□□□ -0.8
SAM1	YLR180W	YKL050C	P35736	922 aa		10.06	□□□□□ -0.8
SAM1	YLR180W	CAB3	P36076	571 aa		10.06	□□□□□ -0.8
SAM1	YLR180W	PFD1	P46988	109 aa		10.06	□□□□□ -0.8
SAM1	YLR180W	PYK2	P52489	506 aa	Known RBP	10.06	□□□□□ -0.8
SAM1	YLR180W	CWC22	P53333	577 aa	Known RBP	10.06	□□□□□ -0.8
SAM1	YLR180W	YMR114C	Q04471	368 aa	Known RBP	10.06	□□□□□ -0.8
SAM1	YLR180W	SPO21	Q12411	609 aa		10.06	□□□□□ -0.8
SAM1	YLR180W	RMP1	Q12530	201 aa		10.06	□□□□□ -0.8
SAM1	YLR180W	ENO2	P00925	437 aa	Known RBP	10.05	□□□□□ -0.8
SAM1	YLR180W	RML2	P32611	393 aa		10.05	□□□□□ -0.8
SAM1	YLR180W	LEU5	P38702	357 aa		10.05	□□□□□ -0.8
SAM1	YLR180W	WSC4	P38739	605 aa		10.05	□□□□□ -0.8
SAM1	YLR180W	UBP7	P40453	1071 aa		10.05	□□□□□ -0.8
SAM1	YLR180W	JJJ1	P53863	590 aa		10.05	□□□□□ -0.8
SAM1	YLR180W	PEX13	P80667	386 aa		10.05	□□□□□ -0.8
SAM1	YLR180W	PIR3	Q03180	325 aa		10.05	□□□□□ -0.8
SAM1	YLR180W	VTI1	Q04338	217 aa		10.05	□□□□□ -0.8
SAM1	YLR180W	NOP6	Q07623	225 aa	Known RBP	10.05	□□□□□ -0.8
SAM1	YLR180W	NUR1	Q12066	484 aa		10.05	□□□□□ -0.8
SAM1	YLR180W	ECM3	Q99252	613 aa		10.05	□□□□□ -0.8
SAM1	YLR180W	GFA1	P14742	717 aa	Known RBP	10.04	□□□□□ -0.8
SAM1	YLR180W	PAP1	P29468	568 aa	Known RBP	10.04	□□□□□ -0.8
SAM1	YLR180W	NPY1	P53164	384 aa		10.04	□□□□□ -0.8
SAM1	YLR180W	YGL036W	P53185	909 aa	Predicted RBP	10.04	□□□□□ -0.8
SAM1	YLR180W	PPM1	Q04081	328 aa		10.04	□□□□□ -0.8
SAM1	YLR180W	ECM38	Q05902	660 aa	Predicted RBP	10.04	□□□□□ -0.8
SAM1	YLR180W	APC5	Q08683	685 aa		10.04	□□□□□ -0.8
SAM1	YLR180W	TRE1	Q08919	783 aa		10.04	□□□□□ -0.8
SAM1	YLR180W	LCB4	Q12246	624 aa		10.04	□□□□□ -0.8
SAM1	YLR180W	CDC8	P00572	216 aa		10.03	□□□□□ -0.8
SAM1	YLR180W	GCG1	P32656	232 aa	Known RBP	10.03	□□□□□ -0.8
SAM1	YLR180W	EXO5	P38289	585 aa		10.03	□□□□□ -0.8
SAM1	YLR180W	DUG1	P43616	481 aa	Known RBP	10.03	□□□□□ -0.8
SAM1	YLR180W	YMR206W	Q03695	313 aa		10.03	□□□□□ -0.8
SAM1	YLR180W	SPG3	Q04398	127 aa	Predicted RBP	10.03	□□□□□ -0.8
SAM1	YLR180W	ZRT2	Q12436	422 aa		10.03	□□□□□ -0.8
SAM1	YLR180W	ARF2	P19146	181 aa	Known RBP	10.02	□□□□□ -0.81
SAM1	YLR180W	CAP1	P28495	268 aa	Known RBP	10.02	□□□□□ -0.81
SAM1	YLR180W	CSG2	P35206	410 aa		10.02	□□□□□ -0.81
SAM1	YLR180W	HIS2	P38635	335 aa		10.02	□□□□□ -0.81
SAM1	YLR180W	DYS1	P38791	387 aa		10.02	□□□□□ -0.81
SAM1	YLR180W	YPS6	P40583	537 aa		10.02	□□□□□ -0.81
SAM1	YLR180W	RPC17	P47076	161 aa		10.02	□□□□□ -0.81
SAM1	YLR180W	RSM7	P47150	247 aa		10.02	□□□□□ -0.81
SAM1	YLR180W	MND1	P53102	219 aa		10.02	□□□□□ -0.81
SAM1	YLR180W	YGR111W	P53265	400 aa		10.02	□□□□□ -0.81
SAM1	YLR180W	RIO1	Q12196	484 aa	Known RBP	10.02	□□□□□ -0.81
SAM1	YLR180W	AI5_BETA	Q9ZZX0	354 aa		10.02	□□□□□ -0.81
SAM1	YLR180W	DAL2	P25335	343 aa		10.01	□□□□□ -0.81
SAM1	YLR180W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	10.01	□□□□□ -0.81	not detected
SAM1	YLR180W	SPT5	P27692	1063 aa	Known RBP	10.01	□□□□□ -0.81
SAM1	YLR180W	CDC11	P32458	415 aa		10.01	□□□□□ -0.81
SAM1	YLR180W	YER158C	P40095	573 aa		10.01	□□□□□ -0.81
SAM1	YLR180W	ECI1	Q05871	280 aa		10.01	□□□□□ -0.81
SAM1	YLR180W	YSH1	Q06224	779 aa	Predicted RBP	10.01	□□□□□ -0.81
SAM1	YLR180W	PMT7	Q06644	662 aa		10.01	□□□□□ -0.81
SAM1	YLR180W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	10.01	□□□□□ -0.81	not detected
SAM1	YLR180W	SVS1	Q12254	260 aa		10.01	□□□□□ -0.81
SAM1	YLR180W	YMC2	P38087	329 aa		10	□□□□□ -0.81
SAM1	YLR180W	YBR053C	P38235	358 aa		10	□□□□□ -0.81
SAM1	YLR180W	CIN4	P39110	191 aa		10	□□□□□ -0.81
SAM1	YLR180W	TIF34	P40217	347 aa	Known RBP	10	□□□□□ -0.81
SAM1	YLR180W	PHO86	P46956	311 aa		10	□□□□□ -0.81
SAM1	YLR180W	IML2	P47031	731 aa		10	□□□□□ -0.81
SAM1	YLR180W	COQ5	P49017	307 aa		10	□□□□□ -0.81
SAM1	YLR180W	MNN10	P50108	393 aa	Known RBP	10	□□□□□ -0.81
SAM1	YLR180W	DRN1	P53255	507 aa	Known RBP	10	□□□□□ -0.81
SAM1	YLR180W	YPL062W	Q02781	134 aa		10	□□□□□ -0.81
SAM1	YLR180W	DIG1	Q03063	452 aa	Known RBP	10	□□□□□ -0.81
SAM1	YLR180W	YMR187C	Q03236	431 aa		10	□□□□□ -0.81
SAM1	YLR180W	ATG16	Q03818	150 aa		10	□□□□□ -0.81
SAM1	YLR180W	URH1	Q04179	340 aa		10	□□□□□ -0.81
SAM1	YLR180W	MDM38	Q08179	573 aa		10	□□□□□ -0.81
SAM1	YLR180W	CLP1	Q08685	445 aa	Predicted RBP	10	□□□□□ -0.81
SAM1	YLR180W	VPS54	Q12071	889 aa		10	□□□□□ -0.81
SAM1	YLR180W	YLR462W	O13556	202 aa		9.99	□□□□□ -0.81
SAM1	YLR180W	YJU3	P28321	313 aa		9.99	□□□□□ -0.81
SAM1	YLR180W	PYC2	P32327	1180 aa	Known RBP	9.99	□□□□□ -0.81
SAM1	YLR180W	SFP1	P32432	683 aa		9.99	□□□□□ -0.81
SAM1	YLR180W	UBC6	P33296	250 aa	Predicted RBP	9.99	□□□□□ -0.81
SAM1	YLR180W	DCW1	P36091	449 aa		9.99	□□□□□ -0.81
SAM1	YLR180W	OLA1	P38219	394 aa	Known RBP	9.99	□□□□□ -0.81

Retrieved 100 of 5,963 RNA–protein pairs in 128.2 ms