RNA–Protein interactions for RNA: YLR170C

APS1, Transcript of Small subunit of the clathrin-associated adaptor complex AP-1, yeast

Gene APS1, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APS1	YLR170C	CIT2	P08679	460 aa		4.98	□□□□□ -1.61
APS1	YLR170C	SPT5	P27692	1063 aa	Known RBP	4.98	□□□□□ -1.61
APS1	YLR170C	CBF2	P32504	956 aa		4.98	□□□□□ -1.61
APS1	YLR170C	JNM1	P36224	373 aa		4.98	□□□□□ -1.61
APS1	YLR170C	YBL036C	P38197	257 aa		4.98	□□□□□ -1.61
APS1	YLR170C	RCK2	P38623	610 aa		4.98	□□□□□ -1.61
APS1	YLR170C	PMC1	P38929	1173 aa	Predicted RBP	4.98	□□□□□ -1.61
APS1	YLR170C	GEM1	P39722	662 aa		4.98	□□□□□ -1.61
APS1	YLR170C	STU2	P46675	888 aa		4.98	□□□□□ -1.61
APS1	YLR170C	ASG7	P46993	209 aa		4.98	□□□□□ -1.61
APS1	YLR170C	VPS25	P47142	202 aa		4.98	□□□□□ -1.61
APS1	YLR170C	YGR111W	P53265	400 aa		4.98	□□□□□ -1.61
APS1	YLR170C	CEG1	Q01159	459 aa	Predicted RBP	4.98	□□□□□ -1.61
APS1	YLR170C	SPO71	Q03868	1245 aa		4.98	□□□□□ -1.61
APS1	YLR170C	YMR018W	Q04364	514 aa		4.98	□□□□□ -1.61
APS1	YLR170C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
APS1	YLR170C	YLR122C	Q12312	125 aa		4.98	□□□□□ -1.61
APS1	YLR170C	UBR2	Q07963	1872 aa		4.97	□□□□□ -1.61
APS1	YLR170C	RPP1A	P05318	106 aa	Predicted RBP	4.97	□□□□□ -1.61
APS1	YLR170C	SFL1	P20134	766 aa		4.97	□□□□□ -1.61
APS1	YLR170C	CKI1	P20485	582 aa		4.97	□□□□□ -1.61
APS1	YLR170C	PGS1	P25578	521 aa		4.97	□□□□□ -1.61
APS1	YLR170C	MLF3	P32047	452 aa		4.97	□□□□□ -1.61
APS1	YLR170C	COQ2	P32378	372 aa		4.97	□□□□□ -1.61
APS1	YLR170C	EFB1	P32471	206 aa	Known RBP	4.97	□□□□□ -1.61
APS1	YLR170C	DSS4	P32601	143 aa		4.97	□□□□□ -1.61
APS1	YLR170C	ABD1	P32783	436 aa	Predicted RBP	4.97	□□□□□ -1.61
APS1	YLR170C	STO1	P34160	861 aa	Known RBP	4.97	□□□□□ -1.61
APS1	YLR170C	SLD2	P34252	453 aa		4.97	□□□□□ -1.61
APS1	YLR170C	TSA1	P34760	196 aa	Known RBP	4.97	□□□□□ -1.61
APS1	YLR170C	YKL050C	P35736	922 aa		4.97	□□□□□ -1.61
APS1	YLR170C	YKR051W	P36142	418 aa		4.97	□□□□□ -1.61
APS1	YLR170C	SIF2	P38262	535 aa		4.97	□□□□□ -1.61
APS1	YLR170C	APM2	P38700	605 aa		4.97	□□□□□ -1.61
APS1	YLR170C	YEL075C	P39972	122 aa		4.97	□□□□□ -1.61
APS1	YLR170C	PSY2	P40164	858 aa		4.97	□□□□□ -1.61
APS1	YLR170C	TMA108	P40462	946 aa		4.97	□□□□□ -1.61
APS1	YLR170C	ASG1	P40467	964 aa		4.97	□□□□□ -1.61
APS1	YLR170C	FAF1	P40546	346 aa	Predicted RBP	4.97	□□□□□ -1.61
APS1	YLR170C	YNL108C	P53929	270 aa		4.97	□□□□□ -1.61
APS1	YLR170C	GPD1	Q00055	391 aa	Known RBP	4.97	□□□□□ -1.61
APS1	YLR170C	MUB1	Q03162	620 aa		4.97	□□□□□ -1.61
APS1	YLR170C	TFB3	Q03290	321 aa		4.97	□□□□□ -1.61
APS1	YLR170C	CEF1	Q03654	590 aa	Predicted RBP	4.97	□□□□□ -1.61
APS1	YLR170C	ATG16	Q03818	150 aa		4.97	□□□□□ -1.61
APS1	YLR170C	POB3	Q04636	552 aa	Known RBP	4.97	□□□□□ -1.61
APS1	YLR170C	AIM32	Q04689	311 aa		4.97	□□□□□ -1.61
APS1	YLR170C	SOV1	Q04748	898 aa		4.97	□□□□□ -1.61
APS1	YLR170C	LEA1	Q08963	238 aa	Predicted RBP	4.97	□□□□□ -1.61
APS1	YLR170C	MNL2	Q12205	849 aa		4.97	□□□□□ -1.61
APS1	YLR170C	YPK1	P12688	680 aa	Known RBP	4.96	□□□□□ -1.62
APS1	YLR170C	KGD2	P19262	463 aa	Predicted RBP	4.96	□□□□□ -1.62
APS1	YLR170C	AEP2	P22136	580 aa		4.96	□□□□□ -1.62
APS1	YLR170C	STE11	P23561	717 aa		4.96	□□□□□ -1.62
APS1	YLR170C	KAE1	P36132	386 aa		4.96	□□□□□ -1.62
APS1	YLR170C	RGD1	P38339	666 aa		4.96	□□□□□ -1.62
APS1	YLR170C	QNS1	P38795	714 aa	Known RBP	4.96	□□□□□ -1.62
APS1	YLR170C	YMR124W	P39523	943 aa	Known RBP	4.96	□□□□□ -1.62
APS1	YLR170C	ERP2	P39704	215 aa		4.96	□□□□□ -1.62
APS1	YLR170C	YIR016W	P40572	265 aa		4.96	□□□□□ -1.62
APS1	YLR170C	MAF1	P41910	395 aa		4.96	□□□□□ -1.62
APS1	YLR170C	KAP114	P53067	1004 aa		4.96	□□□□□ -1.62
APS1	YLR170C	ARO80	Q04052	950 aa		4.96	□□□□□ -1.62
APS1	YLR170C	TAF9	Q05027	157 aa		4.96	□□□□□ -1.62
APS1	YLR170C	UTP13	Q05946	817 aa	Known RBP	4.96	□□□□□ -1.62
APS1	YLR170C	ECM22	Q05958	814 aa	Predicted RBP	4.96	□□□□□ -1.62
APS1	YLR170C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
APS1	YLR170C	RCL1	Q08096	367 aa	Predicted RBP	4.96	□□□□□ -1.62
APS1	YLR170C	TAF10	Q12030	206 aa		4.96	□□□□□ -1.62
APS1	YLR170C	NBP2	Q12163	236 aa		4.96	□□□□□ -1.62
APS1	YLR170C	JIP3	O13555	125 aa		4.95	□□□□□ -1.62
APS1	YLR170C	SPE1	P08432	466 aa		4.95	□□□□□ -1.62
APS1	YLR170C	PET111	P08468	800 aa		4.95	□□□□□ -1.62
APS1	YLR170C	HMG2	P12684	1045 aa		4.95	□□□□□ -1.62
APS1	YLR170C	MTF1	P14908	341 aa	Known RBP	4.95	□□□□□ -1.62
APS1	YLR170C	RRP43	P25359	394 aa	Predicted RBP	4.95	□□□□□ -1.62
APS1	YLR170C	CAP1	P28495	268 aa	Known RBP	4.95	□□□□□ -1.62
APS1	YLR170C	PEX2	P32800	271 aa		4.95	□□□□□ -1.62
APS1	YLR170C	MNR2	P35724	969 aa		4.95	□□□□□ -1.62
APS1	YLR170C	NCL1	P38205	684 aa	Known RBP	4.95	□□□□□ -1.62
APS1	YLR170C	YBR053C	P38235	358 aa		4.95	□□□□□ -1.62
APS1	YLR170C	SWC5	P38326	303 aa		4.95	□□□□□ -1.62
APS1	YLR170C	PCM1	P38628	557 aa	Known RBP	4.95	□□□□□ -1.62
APS1	YLR170C	MMS21	P38632	267 aa		4.95	□□□□□ -1.62
APS1	YLR170C	LYS9	P38999	446 aa		4.95	□□□□□ -1.62
APS1	YLR170C	SPC72	P39723	622 aa		4.95	□□□□□ -1.62
APS1	YLR170C	TMN3	P40071	706 aa		4.95	□□□□□ -1.62
APS1	YLR170C	YTA6	P40328	754 aa		4.95	□□□□□ -1.62
APS1	YLR170C	SEC9	P40357	651 aa		4.95	□□□□□ -1.62
APS1	YLR170C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
APS1	YLR170C	MRX6	P48564	524 aa		4.95	□□□□□ -1.62
APS1	YLR170C	SML1	Q04964	104 aa		4.95	□□□□□ -1.62
APS1	YLR170C	KAP95	Q06142	861 aa	Known RBP	4.95	□□□□□ -1.62
APS1	YLR170C	PIG1	Q06216	648 aa		4.95	□□□□□ -1.62
APS1	YLR170C	BSP1	Q06604	576 aa		4.95	□□□□□ -1.62
APS1	YLR170C	VAC14	Q06708	880 aa		4.95	□□□□□ -1.62
APS1	YLR170C	MDM38	Q08179	573 aa		4.95	□□□□□ -1.62
APS1	YLR170C	AIM39	Q08223	395 aa		4.95	□□□□□ -1.62
APS1	YLR170C	HRT3	Q12347	344 aa		4.95	□□□□□ -1.62
APS1	YLR170C	APE1	P14904	514 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms