RNA–Protein interactions for RNA: YLR097C

HRT3, Transcript of Putative SCF-ubiquitin ligase F-box protein, yeast

Gene HRT3, Length 1,035 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRT3	YLR097C	UFO1	Q04511	668 aa		5.28	□□□□□ -1.56
HRT3	YLR097C	DBP10	Q12389	995 aa	Known RBP	5.28	□□□□□ -1.56
HRT3	YLR097C	ADH4	P10127	382 aa		5.27	□□□□□ -1.57
HRT3	YLR097C	CDC43	P18898	376 aa		5.27	□□□□□ -1.57
HRT3	YLR097C	VPS33	P20795	691 aa		5.27	□□□□□ -1.57
HRT3	YLR097C	GMH1	P36125	273 aa		5.27	□□□□□ -1.57
HRT3	YLR097C	KSP1	P38691	1029 aa	Known RBP	5.27	□□□□□ -1.57
HRT3	YLR097C	SDS3	P40505	327 aa		5.27	□□□□□ -1.57
HRT3	YLR097C	QRI7	P43122	407 aa		5.27	□□□□□ -1.57
HRT3	YLR097C	NMA2	P53204	395 aa		5.27	□□□□□ -1.57
HRT3	YLR097C	DIP5	P53388	608 aa		5.27	□□□□□ -1.57
HRT3	YLR097C	TEP1	P53916	434 aa		5.27	□□□□□ -1.57
HRT3	YLR097C	BMS1	Q08965	1183 aa	Known RBP	5.27	□□□□□ -1.57
HRT3	YLR097C	RKI1	Q12189	258 aa		5.27	□□□□□ -1.57
HRT3	YLR097C	KIN3	P22209	435 aa		5.26	□□□□□ -1.57
HRT3	YLR097C	YHL041W	P38730	149 aa		5.26	□□□□□ -1.57
HRT3	YLR097C	YLF2	P38746	405 aa		5.26	□□□□□ -1.57
HRT3	YLR097C	YJL206C	P39529	758 aa		5.26	□□□□□ -1.57
HRT3	YLR097C	SWD1	P39706	426 aa		5.26	□□□□□ -1.57
HRT3	YLR097C	BDH2	P39713	417 aa		5.26	□□□□□ -1.57
HRT3	YLR097C	THI6	P41835	540 aa		5.26	□□□□□ -1.57
HRT3	YLR097C	DAK1	P54838	584 aa	Known RBP	5.26	□□□□□ -1.57
HRT3	YLR097C	EFR3	Q03653	782 aa	Known RBP	5.26	□□□□□ -1.57
HRT3	YLR097C	VMS1	Q04311	632 aa	Known RBP	5.26	□□□□□ -1.57
HRT3	YLR097C	TMN2	Q04562	672 aa		5.26	□□□□□ -1.57
HRT3	YLR097C	ARR3	Q06598	404 aa		5.26	□□□□□ -1.57
HRT3	YLR097C	PIF1	P07271	859 aa		5.25	□□□□□ -1.57
HRT3	YLR097C	MSS18	P08593	268 aa		5.25	□□□□□ -1.57
HRT3	YLR097C	PCK1	P10963	549 aa		5.25	□□□□□ -1.57
HRT3	YLR097C	PGI1	P12709	554 aa	Known RBP	5.25	□□□□□ -1.57
HRT3	YLR097C	DMC1	P25453	334 aa		5.25	□□□□□ -1.57
HRT3	YLR097C	MRPL7	P36519	292 aa		5.25	□□□□□ -1.57
HRT3	YLR097C	UBS1	P38290	277 aa		5.25	□□□□□ -1.57
HRT3	YLR097C	VPS27	P40343	622 aa	Known RBP	5.25	□□□□□ -1.57
HRT3	YLR097C	GND2	P53319	492 aa		5.25	□□□□□ -1.57
HRT3	YLR097C	PHO81	P17442	1178 aa		5.24	□□□□□ -1.57
HRT3	YLR097C	MSH1	P25846	959 aa		5.24	□□□□□ -1.57
HRT3	YLR097C	CAP1	P28495	268 aa	Known RBP	5.24	□□□□□ -1.57
HRT3	YLR097C	DSS4	P32601	143 aa		5.24	□□□□□ -1.57
HRT3	YLR097C	IMA5	P40884	581 aa		5.24	□□□□□ -1.57
HRT3	YLR097C	CCT7	P42943	550 aa	Known RBP	5.24	□□□□□ -1.57
HRT3	YLR097C	GSM1	P42950	618 aa		5.24	□□□□□ -1.57
HRT3	YLR097C	SPC98	P53540	846 aa		5.24	□□□□□ -1.57
HRT3	YLR097C	SNF12	P53628	566 aa		5.24	□□□□□ -1.57
HRT3	YLR097C	MFM1	Q02783	413 aa		5.24	□□□□□ -1.57
HRT3	YLR097C	HIM1	Q06674	414 aa		5.24	□□□□□ -1.57
HRT3	YLR097C	BRE1	Q07457	700 aa	Known RBP	5.24	□□□□□ -1.57
HRT3	YLR097C	TAF3	Q12297	353 aa		5.24	□□□□□ -1.57
HRT3	YLR097C	LAM4	P38800	1345 aa		5.23	□□□□□ -1.57
HRT3	YLR097C	PWP2	P25635	923 aa	Known RBP	5.23	□□□□□ -1.57
HRT3	YLR097C	MTH1	P35198	433 aa		5.23	□□□□□ -1.57
HRT3	YLR097C	MAD3	P47074	515 aa		5.23	□□□□□ -1.57
HRT3	YLR097C	NGL2	Q03264	515 aa	Known RBP	5.23	□□□□□ -1.57
HRT3	YLR097C	MRH1	Q12117	320 aa	Predicted RBP	5.23	□□□□□ -1.57
HRT3	YLR097C	PTH2	P34222	208 aa		5.22	□□□□□ -1.57
HRT3	YLR097C	VPS24	P36095	224 aa	Known RBP	5.22	□□□□□ -1.57
HRT3	YLR097C	CRD1	Q07560	283 aa		5.22	□□□□□ -1.57
HRT3	YLR097C	AAD4	Q07747	329 aa		5.22	□□□□□ -1.57
HRT3	YLR097C	YPL216W	Q08964	1102 aa		5.22	□□□□□ -1.57
HRT3	YLR097C	APM3	P38153	483 aa		5.21	□□□□□ -1.58
HRT3	YLR097C	ACA1	P39970	489 aa		5.21	□□□□□ -1.58
HRT3	YLR097C	VFA1	P40080	203 aa		5.21	□□□□□ -1.58
HRT3	YLR097C	PMT6	P42934	759 aa		5.21	□□□□□ -1.58
HRT3	YLR097C	STU2	P46675	888 aa		5.21	□□□□□ -1.58
HRT3	YLR097C	YIP4	P53093	235 aa		5.21	□□□□□ -1.58
HRT3	YLR097C	ATG16	Q03818	150 aa		5.21	□□□□□ -1.58
HRT3	YLR097C	IRC10	Q08118	586 aa		5.21	□□□□□ -1.58
HRT3	YLR097C	SEC18	P18759	758 aa	Known RBP	5.2	□□□□□ -1.58
HRT3	YLR097C	STE4	P18851	423 aa		5.2	□□□□□ -1.58
HRT3	YLR097C	BET2	P20133	325 aa		5.2	□□□□□ -1.58
HRT3	YLR097C	PIH1	P38768	344 aa		5.2	□□□□□ -1.58
HRT3	YLR097C	MOT3	P54785	490 aa	Known RBP	5.2	□□□□□ -1.58
HRT3	YLR097C	ACS1	Q01574	713 aa		5.2	□□□□□ -1.58
HRT3	YLR097C	TRS23	Q03784	219 aa		5.2	□□□□□ -1.58
HRT3	YLR097C	YDR179W-A	Q03983	463 aa		5.2	□□□□□ -1.58
HRT3	YLR097C	HOF1	Q05080	669 aa		5.2	□□□□□ -1.58
HRT3	YLR097C	ENT2	Q05785	613 aa		5.2	□□□□□ -1.58
HRT3	YLR097C	CTT1	P06115	562 aa		5.19	□□□□□ -1.58
HRT3	YLR097C	GFA1	P14742	717 aa	Known RBP	5.19	□□□□□ -1.58
HRT3	YLR097C	VPS34	P22543	875 aa		5.19	□□□□□ -1.58
HRT3	YLR097C	CNE1	P27825	502 aa		5.19	□□□□□ -1.58
HRT3	YLR097C	PRP45	P28004	379 aa	Predicted RBP	5.19	□□□□□ -1.58
HRT3	YLR097C	PMC1	P38929	1173 aa	Predicted RBP	5.19	□□□□□ -1.58
HRT3	YLR097C	STT3	P39007	718 aa	Known RBP	5.19	□□□□□ -1.58
HRT3	YLR097C	BUD17	P53727	317 aa		5.19	□□□□□ -1.58
HRT3	YLR097C	TRS31	Q03337	283 aa		5.19	□□□□□ -1.58
HRT3	YLR097C	TGS1	Q12052	315 aa		5.19	□□□□□ -1.58
HRT3	YLR097C	MDM20	Q12387	796 aa	Known RBP	5.19	□□□□□ -1.58
HRT3	YLR097C	PHO5	P00635	467 aa		5.18	□□□□□ -1.58
HRT3	YLR097C	LOT5	P34234	306 aa		5.18	□□□□□ -1.58
HRT3	YLR097C	CCL1	P37366	393 aa		5.18	□□□□□ -1.58
HRT3	YLR097C	YMC2	P38087	329 aa		5.18	□□□□□ -1.58
HRT3	YLR097C	STB5	P38699	743 aa		5.18	□□□□□ -1.58
HRT3	YLR097C	IDS2	P46958	469 aa		5.18	□□□□□ -1.58
HRT3	YLR097C	COS12	P53053	380 aa		5.18	□□□□□ -1.58
HRT3	YLR097C	VPS73	P53142	486 aa	Known RBP	5.18	□□□□□ -1.58
HRT3	YLR097C	USA1	Q03714	838 aa		5.18	□□□□□ -1.58
HRT3	YLR097C	VPS64	Q03944	604 aa		5.18	□□□□□ -1.58
HRT3	YLR097C	YDL073W	Q07454	984 aa		5.18	□□□□□ -1.58
HRT3	YLR097C	MIS1	P09440	975 aa	Known RBP	5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms