RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W RPN8Q08723 338 aaKnown RBP6.56□□□□□ -1.36
GEF1YJR040W SNF1P06782 633 aaKnown RBP6.55□□□□□ -1.36
GEF1YJR040W WHI2P12611 486 aa6.55□□□□□ -1.36
GEF1YJR040W BUD23P25627 275 aaPredicted RBP6.55□□□□□ -1.36
GEF1YJR040W YKR015CP36111 568 aa6.55□□□□□ -1.36
GEF1YJR040W CCL1P37366 393 aa6.55□□□□□ -1.36
GEF1YJR040W MRX3P38172 270 aa6.55□□□□□ -1.36
GEF1YJR040W MUM2P38236 366 aa6.55□□□□□ -1.36
GEF1YJR040W MMS4P38257 691 aa6.55□□□□□ -1.36
GEF1YJR040W HSM3P38348 480 aa6.55□□□□□ -1.36
GEF1YJR040W ALD5P40047 520 aaKnown RBP6.55□□□□□ -1.36
GEF1YJR040W FMP33P46998 180 aa6.55□□□□□ -1.36
GEF1YJR040W RFX1P48743 811 aa6.55□□□□□ -1.36
GEF1YJR040W RPA49Q01080 415 aaPredicted RBP6.55□□□□□ -1.36
GEF1YJR040W CEF1Q03654 590 aaPredicted RBP6.55□□□□□ -1.36
GEF1YJR040W GET4Q12125 312 aa6.55□□□□□ -1.36
GEF1YJR040W YDR461C-AQ2V2P7 80 aa6.55□□□□□ -1.36
GEF1YJR040W ILV2P07342 687 aaKnown RBP6.55□□□□□ -1.36
GEF1YJR040W FAR1P21268 830 aa6.55□□□□□ -1.36
GEF1YJR040W CNA1P23287 553 aa6.55□□□□□ -1.36
GEF1YJR040W DUR3P33413 735 aa6.55□□□□□ -1.36
GEF1YJR040W YKR078WP36158 585 aaKnown RBP6.55□□□□□ -1.36
GEF1YJR040W LDH1P38139 375 aa6.55□□□□□ -1.36
GEF1YJR040W YBR032WP38223 100 aa6.55□□□□□ -1.36
GEF1YJR040W RFC3P38629 340 aa6.55□□□□□ -1.36
GEF1YJR040W MMS21P38632 267 aa6.55□□□□□ -1.36
GEF1YJR040W YAP1801P38856 637 aa6.55□□□□□ -1.36
GEF1YJR040W ACF4P47129 309 aa6.55□□□□□ -1.36
GEF1YJR040W ASN1P49089 572 aaKnown RBP6.55□□□□□ -1.36
GEF1YJR040W LSG1P53145 640 aaKnown RBP6.55□□□□□ -1.36
GEF1YJR040W UBP2Q01476 1272 aa6.55□□□□□ -1.36
GEF1YJR040W GIS3Q12418 502 aa6.55□□□□□ -1.36
GEF1YJR040W GCR1P07261 785 aa6.54□□□□□ -1.36
GEF1YJR040W CLB2P24869 491 aa6.54□□□□□ -1.36
GEF1YJR040W MPT5P39016 859 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
GEF1YJR040W PCF11P39081 626 aaPredicted RBP6.54□□□□□ -1.36
GEF1YJR040W NPT1P39683 429 aaKnown RBP6.54□□□□□ -1.36
GEF1YJR040W CLA4P48562 842 aa6.54□□□□□ -1.36
GEF1YJR040W MNP1P53163 194 aaPredicted RBP6.54□□□□□ -1.36
GEF1YJR040W YGR016WP53209 190 aa6.54□□□□□ -1.36
GEF1YJR040W ACL4Q03771 387 aa6.54□□□□□ -1.36
GEF1YJR040W YMR111CQ04461 462 aaPredicted RBP6.54□□□□□ -1.36
GEF1YJR040W NCR1Q12200 1170 aa6.54□□□□□ -1.36
GEF1YJR040W DBP10Q12389 995 aaKnown RBP6.54□□□□□ -1.36
GEF1YJR040W RRD2Q12461 358 aa6.54□□□□□ -1.36
GEF1YJR040W MPH2P0CD99 609 aa6.54□□□□□ -1.36
GEF1YJR040W SEC63P14906 663 aa6.54□□□□□ -1.36
GEF1YJR040W SDH2P21801 266 aa6.54□□□□□ -1.36
GEF1YJR040W MRPL25P23369 157 aa6.54□□□□□ -1.36
GEF1YJR040W HSP78P33416 811 aa6.54□□□□□ -1.36
GEF1YJR040W PAM1P37304 830 aaKnown RBP6.54□□□□□ -1.36
GEF1YJR040W ATG14P38270 344 aa6.54□□□□□ -1.36
GEF1YJR040W OAF1P39720 1047 aaPredicted RBP6.54□□□□□ -1.36
GEF1YJR040W YMR134WP40207 237 aa6.54□□□□□ -1.36
GEF1YJR040W DRN1P53255 507 aaKnown RBP6.54□□□□□ -1.36
GEF1YJR040W OSH6Q02201 448 aa6.54□□□□□ -1.36
GEF1YJR040W TRS130Q03660 1102 aa6.54□□□□□ -1.36
GEF1YJR040W RSR1P13856 272 aa6.53□□□□□ -1.36
GEF1YJR040W HEM15P16622 393 aa6.53□□□□□ -1.36
GEF1YJR040W TEC1P18412 486 aa6.53□□□□□ -1.36
GEF1YJR040W FUB1P25659 250 aa6.53□□□□□ -1.36
GEF1YJR040W MGT1P26188 188 aa6.53□□□□□ -1.36
GEF1YJR040W SEC21P32074 935 aaKnown RBP6.53□□□□□ -1.36
GEF1YJR040W GYP6P32806 458 aa6.53□□□□□ -1.36
GEF1YJR040W TRM2P33753 639 aa6.53□□□□□ -1.36
GEF1YJR040W PIN4P34217 668 aaKnown RBP RIP-Chip data6.53□□□□□ -1.36not detected
GEF1YJR040W AFG3P39925 761 aa6.53□□□□□ -1.36
GEF1YJR040W ALA1P40825 983 aaKnown RBP6.53□□□□□ -1.36
GEF1YJR040W MKT1P40850 830 aaKnown RBP6.53□□□□□ -1.36
GEF1YJR040W YGL176CP46945 554 aa6.53□□□□□ -1.36
GEF1YJR040W RSM26P47141 266 aa6.53□□□□□ -1.36
GEF1YJR040W HSH155P49955 971 aaKnown RBP6.53□□□□□ -1.36
GEF1YJR040W YGR111WP53265 400 aa6.53□□□□□ -1.36
GEF1YJR040W COA4Q05809 96 aa6.53□□□□□ -1.36
GEF1YJR040W DNL4Q08387 944 aaPredicted RBP6.53□□□□□ -1.36
GEF1YJR040W YDL206WQ12424 762 aa6.53□□□□□ -1.36
GEF1YJR040W URA4P20051 364 aa6.53□□□□□ -1.36
GEF1YJR040W UBA1P22515 1024 aaKnown RBP6.53□□□□□ -1.36
GEF1YJR040W DAL2P25335 343 aa6.53□□□□□ -1.36
GEF1YJR040W ITR2P30606 609 aa6.53□□□□□ -1.36
GEF1YJR040W UIP5P36137 443 aa6.53□□□□□ -1.36
GEF1YJR040W VID24P38263 362 aa6.53□□□□□ -1.36
GEF1YJR040W YTA12P40341 825 aa6.53□□□□□ -1.36
GEF1YJR040W ASG1P40467 964 aa6.53□□□□□ -1.36
GEF1YJR040W YFL040WP43562 540 aa6.53□□□□□ -1.36
GEF1YJR040W ORC5P50874 479 aa6.53□□□□□ -1.36
GEF1YJR040W NOG2P53742 486 aaKnown RBP6.53□□□□□ -1.36
GEF1YJR040W YDR090CQ03193 310 aa6.53□□□□□ -1.36
GEF1YJR040W ATG16Q03818 150 aa6.53□□□□□ -1.36
GEF1YJR040W UFO1Q04511 668 aa6.53□□□□□ -1.36
GEF1YJR040W ECM30Q06673 1274 aa6.53□□□□□ -1.36
GEF1YJR040W VHS3Q08438 674 aa6.53□□□□□ -1.36
GEF1YJR040W GCN3P14741 305 aa6.52□□□□□ -1.37
GEF1YJR040W MSS116P15424 664 aaKnown RBP6.52□□□□□ -1.37
GEF1YJR040W COX11P19516 300 aaKnown RBP6.52□□□□□ -1.37
GEF1YJR040W RPT1P33299 467 aaKnown RBP6.52□□□□□ -1.37
GEF1YJR040W HES1P35843 434 aa6.52□□□□□ -1.37
GEF1YJR040W POP4P38336 279 aa6.52□□□□□ -1.37
GEF1YJR040W VPS70P47161 811 aa6.52□□□□□ -1.37
GEF1YJR040W RNR4P49723 345 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms