RNA–Protein interactions for RNA: YIL104C

SHQ1, Transcript of Chaperone protein, yeast

Gene SHQ1, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHQ1	YIL104C	HAS1	Q03532	505 aa	Known RBP	3.6	□□□□□ -1.83
SHQ1	YIL104C	MRI1	Q06489	411 aa	Known RBP	3.6	□□□□□ -1.83
SHQ1	YIL104C	CDA2	Q06703	312 aa		3.6	□□□□□ -1.83
SHQ1	YIL104C	DNL4	Q08387	944 aa	Predicted RBP	3.6	□□□□□ -1.83
SHQ1	YIL104C	HMI1	Q12039	706 aa		3.6	□□□□□ -1.83
SHQ1	YIL104C	ATG9	Q12142	997 aa		3.6	□□□□□ -1.83
SHQ1	YIL104C	APM4	Q99186	491 aa		3.6	□□□□□ -1.83
SHQ1	YIL104C	YPR117W	Q06116	2489 aa		3.59	□□□□□ -1.83
SHQ1	YIL104C	ERG11	P10614	530 aa		3.59	□□□□□ -1.84
SHQ1	YIL104C	CLC1	P17891	233 aa		3.59	□□□□□ -1.84
SHQ1	YIL104C	SAT4	P25333	603 aa	Known RBP	3.59	□□□□□ -1.84
SHQ1	YIL104C	VBA3	P25594	458 aa		3.59	□□□□□ -1.84
SHQ1	YIL104C	CBF2	P32504	956 aa		3.59	□□□□□ -1.84
SHQ1	YIL104C	MRP4	P32902	394 aa		3.59	□□□□□ -1.84
SHQ1	YIL104C	VBA5	P36172	582 aa		3.59	□□□□□ -1.84
SHQ1	YIL104C	SIP5	P40210	489 aa	Known RBP	3.59	□□□□□ -1.84
SHQ1	YIL104C	TFG2	P41896	400 aa	Predicted RBP	3.59	□□□□□ -1.84
SHQ1	YIL104C	DRN1	P53255	507 aa	Known RBP	3.59	□□□□□ -1.84
SHQ1	YIL104C	ESBP6	P53918	673 aa		3.59	□□□□□ -1.84
SHQ1	YIL104C	MUB1	Q03162	620 aa		3.59	□□□□□ -1.84
SHQ1	YIL104C	GIS1	Q03833	894 aa		3.59	□□□□□ -1.84
SHQ1	YIL104C	YDR222W	Q04925	415 aa		3.59	□□□□□ -1.84
SHQ1	YIL104C	PUN1	Q06991	263 aa		3.59	□□□□□ -1.84
SHQ1	YIL104C	TRE1	Q08919	783 aa		3.59	□□□□□ -1.84
SHQ1	YIL104C	VPS54	Q12071	889 aa		3.59	□□□□□ -1.84
SHQ1	YIL104C	YLL054C	Q12244	843 aa		3.59	□□□□□ -1.84
SHQ1	YIL104C	LCB4	Q12246	624 aa		3.59	□□□□□ -1.84
SHQ1	YIL104C	GAL80	P04387	435 aa		3.58	□□□□□ -1.84
SHQ1	YIL104C	MNR2	P35724	969 aa		3.58	□□□□□ -1.84
SHQ1	YIL104C	SAP190	P36123	1033 aa		3.58	□□□□□ -1.84
SHQ1	YIL104C	PCM1	P38628	557 aa	Known RBP	3.58	□□□□□ -1.84
SHQ1	YIL104C	RIM4	P38741	713 aa		3.58	□□□□□ -1.84
SHQ1	YIL104C	NMD3	P38861	518 aa	Known RBP	3.58	□□□□□ -1.84
SHQ1	YIL104C	FHL1	P39521	936 aa		3.58	□□□□□ -1.84
SHQ1	YIL104C	ASG1	P40467	964 aa		3.58	□□□□□ -1.84
SHQ1	YIL104C	SHQ1	P40486	507 aa	Predicted RBP	3.58	□□□□□ -1.84
SHQ1	YIL104C	TAF1	P46677	1066 aa		3.58	□□□□□ -1.84
SHQ1	YIL104C	FYV8	P46949	817 aa	Known RBP	3.58	□□□□□ -1.84
SHQ1	YIL104C	SMC3	P47037	1230 aa		3.58	□□□□□ -1.84
SHQ1	YIL104C	YJL045W	P47052	634 aa		3.58	□□□□□ -1.84
SHQ1	YIL104C	MCM6	P53091	1017 aa	Known RBP	3.58	□□□□□ -1.84
SHQ1	YIL104C	ADA2	Q02336	434 aa		3.58	□□□□□ -1.84
SHQ1	YIL104C	DIG1	Q03063	452 aa	Known RBP	3.58	□□□□□ -1.84
SHQ1	YIL104C	CWC21	Q03375	135 aa	Known RBP	3.58	□□□□□ -1.84
SHQ1	YIL104C	DIS3	Q08162	1001 aa	Known RBP	3.58	□□□□□ -1.84
SHQ1	YIL104C	SGO1	Q08490	590 aa		3.58	□□□□□ -1.84
SHQ1	YIL104C	NEW1	Q08972	1196 aa	Known RBP	3.58	□□□□□ -1.84
SHQ1	YIL104C	RRP6	Q12149	733 aa	Known RBP	3.58	□□□□□ -1.84
SHQ1	YIL104C	MOT1	P32333	1867 aa		3.57	□□□□□ -1.84
SHQ1	YIL104C	SPE1	P08432	466 aa		3.57	□□□□□ -1.84
SHQ1	YIL104C	POL3	P15436	1097 aa		3.57	□□□□□ -1.84
SHQ1	YIL104C	RAD57	P25301	460 aa		3.57	□□□□□ -1.84
SHQ1	YIL104C	PGS1	P25578	521 aa		3.57	□□□□□ -1.84
SHQ1	YIL104C	RAD27	P26793	382 aa		3.57	□□□□□ -1.84
SHQ1	YIL104C	NIP100	P33420	868 aa		3.57	□□□□□ -1.84
SHQ1	YIL104C	TSA1	P34760	196 aa	Known RBP	3.57	□□□□□ -1.84
SHQ1	YIL104C	QNS1	P38795	714 aa	Known RBP	3.57	□□□□□ -1.84
SHQ1	YIL104C	KAP123	P40069	1113 aa	Known RBP	3.57	□□□□□ -1.84
SHQ1	YIL104C	NTA1	P40354	457 aa		3.57	□□□□□ -1.84
SHQ1	YIL104C	RGD2	P43556	714 aa		3.57	□□□□□ -1.84
SHQ1	YIL104C	MND1	P53102	219 aa		3.57	□□□□□ -1.84
SHQ1	YIL104C	ERG5	P54781	538 aa		3.57	□□□□□ -1.84
SHQ1	YIL104C	GPD1	Q00055	391 aa	Known RBP	3.57	□□□□□ -1.84
SHQ1	YIL104C	MZM1	Q03429	123 aa	Predicted RBP	3.57	□□□□□ -1.84
SHQ1	YIL104C	HER2	Q03557	464 aa		3.57	□□□□□ -1.84
SHQ1	YIL104C	YLR001C	Q07895	862 aa		3.57	□□□□□ -1.84
SHQ1	YIL104C	RCL1	Q08096	367 aa	Predicted RBP	3.57	□□□□□ -1.84
SHQ1	YIL104C	DAP1	Q12091	152 aa		3.57	□□□□□ -1.84
SHQ1	YIL104C	GLO4	Q12320	285 aa		3.57	□□□□□ -1.84
SHQ1	YIL104C	HRT3	Q12347	344 aa		3.57	□□□□□ -1.84
SHQ1	YIL104C	ATP1	P07251	545 aa	Known RBP	3.56	□□□□□ -1.84
SHQ1	YIL104C	CDC33	P07260	213 aa	Known RBP	3.56	□□□□□ -1.84
SHQ1	YIL104C	RRP43	P25359	394 aa	Predicted RBP	3.56	□□□□□ -1.84
SHQ1	YIL104C	EFB1	P32471	206 aa	Known RBP	3.56	□□□□□ -1.84
SHQ1	YIL104C	GYP6	P32806	458 aa		3.56	□□□□□ -1.84
SHQ1	YIL104C	TKL2	P33315	681 aa		3.56	□□□□□ -1.84
SHQ1	YIL104C	YKL097C	P34245	136 aa		3.56	□□□□□ -1.84
SHQ1	YIL104C	YBR053C	P38235	358 aa		3.56	□□□□□ -1.84
SHQ1	YIL104C	YMR124W	P39523	943 aa	Known RBP	3.56	□□□□□ -1.84
SHQ1	YIL104C	GEM1	P39722	662 aa		3.56	□□□□□ -1.84
SHQ1	YIL104C	EFM4	P40516	257 aa		3.56	□□□□□ -1.84
SHQ1	YIL104C	CDC1	P40986	491 aa		3.56	□□□□□ -1.84
SHQ1	YIL104C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	3.56	□□□□□ -1.84	not detected
SHQ1	YIL104C	BOP3	P53958	396 aa		3.56	□□□□□ -1.84
SHQ1	YIL104C	CEG1	Q01159	459 aa	Predicted RBP	3.56	□□□□□ -1.84
SHQ1	YIL104C	ELP3	Q02908	557 aa	Known RBP	3.56	□□□□□ -1.84
SHQ1	YIL104C	TIF35	Q04067	274 aa	Known RBP	3.56	□□□□□ -1.84
SHQ1	YIL104C	GYL1	Q04322	720 aa		3.56	□□□□□ -1.84
SHQ1	YIL104C	YML083C	Q04526	418 aa		3.56	□□□□□ -1.84
SHQ1	YIL104C	YLR287C	Q05881	355 aa		3.56	□□□□□ -1.84
SHQ1	YIL104C	ECM22	Q05958	814 aa	Predicted RBP	3.56	□□□□□ -1.84
SHQ1	YIL104C	BSP1	Q06604	576 aa		3.56	□□□□□ -1.84
SHQ1	YIL104C	YPR078C	Q06813	372 aa		3.56	□□□□□ -1.84
SHQ1	YIL104C	FMP25	Q08023	583 aa		3.56	□□□□□ -1.84
SHQ1	YIL104C	LEA1	Q08963	238 aa	Predicted RBP	3.56	□□□□□ -1.84
SHQ1	YIL104C	GPM2	Q12008	311 aa		3.56	□□□□□ -1.84
SHQ1	YIL104C	EMP46	Q12396	444 aa		3.56	□□□□□ -1.84
SHQ1	YIL104C	YMR084W	A2P2R3	262 aa		3.55	□□□□□ -1.84
SHQ1	YIL104C	RPS3	P05750	240 aa	Known RBP	3.55	□□□□□ -1.84
SHQ1	YIL104C	SNF1	P06782	633 aa	Known RBP	3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms