RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W CCL1P37366 393 aa3.82□□□□□ -1.8
RPF1YHR088W RSC9Q03124 581 aa3.82□□□□□ -1.8
RPF1YHR088W USA1Q03714 838 aa3.82□□□□□ -1.8
RPF1YHR088W SPN1Q06505 410 aaPredicted RBP3.82□□□□□ -1.8
RPF1YHR088W RDL1Q12305 139 aaKnown RBP3.82□□□□□ -1.8
RPF1YHR088W APM4Q99186 491 aa3.82□□□□□ -1.8
RPF1YHR088W NOP14Q99207 810 aaKnown RBP3.82□□□□□ -1.8
RPF1YHR088W URE2P23202 354 aaKnown RBP3.81□□□□□ -1.8
RPF1YHR088W CDS1P38221 457 aa3.81□□□□□ -1.8
RPF1YHR088W YGR153WP48238 217 aa3.81□□□□□ -1.8
RPF1YHR088W SCW4P53334 386 aaKnown RBP3.81□□□□□ -1.8
RPF1YHR088W RNR3P21672 869 aaKnown RBP3.8□□□□□ -1.8
RPF1YHR088W SEC65P29478 273 aa3.8□□□□□ -1.8
RPF1YHR088W LRO1P40345 661 aa3.8□□□□□ -1.8
RPF1YHR088W TDA10P42938 290 aa3.8□□□□□ -1.8
RPF1YHR088W GZF3P42944 551 aaKnown RBP3.8□□□□□ -1.8
RPF1YHR088W BST1P43571 1029 aa3.8□□□□□ -1.8
RPF1YHR088W YFL015CP43578 164 aa3.8□□□□□ -1.8
RPF1YHR088W YJR096WP47137 282 aa3.8□□□□□ -1.8
RPF1YHR088W SAP4P53036 818 aa3.8□□□□□ -1.8
RPF1YHR088W YNL058CP53947 316 aa3.8□□□□□ -1.8
RPF1YHR088W UTP14Q04500 899 aaKnown RBP3.8□□□□□ -1.8
RPF1YHR088W ENT2Q05785 613 aa3.8□□□□□ -1.8
RPF1YHR088W ARR3Q06598 404 aa3.8□□□□□ -1.8
RPF1YHR088W PRS5Q12265 496 aaKnown RBP3.8□□□□□ -1.8
RPF1YHR088W YTA7P40340 1379 aa3.79□□□□□ -1.8
RPF1YHR088W RPL8AP17076 256 aaKnown RBP3.79□□□□□ -1.8
RPF1YHR088W YIL092WP40497 633 aa3.79□□□□□ -1.8
RPF1YHR088W TIM50Q02776 476 aa3.79□□□□□ -1.8
RPF1YHR088W MRPL1Q04599 285 aa3.79□□□□□ -1.8
RPF1YHR088W YCG1Q06680 1035 aa3.79□□□□□ -1.8
RPF1YHR088W HFI1Q12060 488 aa3.79□□□□□ -1.8
RPF1YHR088W MF(ALPHA)2P32435 120 aa3.78□□□□□ -1.8
RPF1YHR088W PRP19P32523 503 aaKnown RBP3.78□□□□□ -1.8
RPF1YHR088W OAF3P36023 863 aa3.78□□□□□ -1.8
RPF1YHR088W DID4P36108 232 aa3.78□□□□□ -1.8
RPF1YHR088W PXL1P36166 706 aa3.78□□□□□ -1.8
RPF1YHR088W PTA1Q01329 785 aaPredicted RBP3.78□□□□□ -1.8
RPF1YHR088W WAR1Q03631 944 aa3.78□□□□□ -1.8
RPF1YHR088W CRC1Q12289 327 aa3.78□□□□□ -1.8
RPF1YHR088W AAC1P04710 309 aa3.77□□□□□ -1.81
RPF1YHR088W VPS33P20795 691 aa3.77□□□□□ -1.81
RPF1YHR088W YPT10P38146 199 aa3.77□□□□□ -1.81
RPF1YHR088W HXT6P39003 570 aaKnown RBP3.77□□□□□ -1.81
RPF1YHR088W HXT7P39004 570 aa3.77□□□□□ -1.81
RPF1YHR088W YJL193WP39542 402 aa3.77□□□□□ -1.81
RPF1YHR088W YPR089WO13585 888 aa3.76□□□□□ -1.81
RPF1YHR088W BI2P03873 423 aa3.76□□□□□ -1.81
RPF1YHR088W MTC7P32633 139 aa3.76□□□□□ -1.81
RPF1YHR088W YHR033WP38690 423 aa3.76□□□□□ -1.81
RPF1YHR088W CFD1P40558 293 aa3.76□□□□□ -1.81
RPF1YHR088W LSC1P53598 329 aaKnown RBP3.76□□□□□ -1.81
RPF1YHR088W ECM9Q02202 377 aa3.76□□□□□ -1.81
RPF1YHR088W NUP53Q03790 475 aa3.76□□□□□ -1.81
RPF1YHR088W CRT10Q08226 957 aa3.76□□□□□ -1.81
RPF1YHR088W NEW1Q08972 1196 aaKnown RBP3.76□□□□□ -1.81
RPF1YHR088W YTM1Q12024 460 aaPredicted RBP3.76□□□□□ -1.81
RPF1YHR088W YLR111WQ12528 110 aa3.76□□□□□ -1.81
RPF1YHR088W RPS21BQ3E754 87 aaKnown RBP3.76□□□□□ -1.81
RPF1YHR088W HMG2P12684 1045 aa3.75□□□□□ -1.81
RPF1YHR088W GLN4P13188 809 aaKnown RBP3.75□□□□□ -1.81
RPF1YHR088W MGM1P32266 881 aa3.75□□□□□ -1.81
RPF1YHR088W RAD26P40352 1085 aa3.75□□□□□ -1.81
RPF1YHR088W MNN11P46985 422 aaKnown RBP3.75□□□□□ -1.81
RPF1YHR088W YHM2Q04013 314 aa3.75□□□□□ -1.81
RPF1YHR088W TPO3Q06451 622 aa3.75□□□□□ -1.81
RPF1YHR088W YAP1P19880 650 aaKnown RBP3.74□□□□□ -1.81
RPF1YHR088W AEP2P22136 580 aa3.74□□□□□ -1.81
RPF1YHR088W TYS1P36421 394 aaKnown RBP3.74□□□□□ -1.81
RPF1YHR088W RRP8P38961 392 aaKnown RBP3.74□□□□□ -1.81
RPF1YHR088W VID28P40547 921 aa3.74□□□□□ -1.81
RPF1YHR088W SAE2P46946 345 aa3.74□□□□□ -1.81
RPF1YHR088W HLJ1P48353 224 aa3.74□□□□□ -1.81
RPF1YHR088W YDL183CP48569 320 aa3.74□□□□□ -1.81
RPF1YHR088W ALG12P53730 551 aa3.74□□□□□ -1.81
RPF1YHR088W SEC3P33332 1336 aaKnown RBP3.73□□□□□ -1.81
RPF1YHR088W SEC12P11655 471 aa3.73□□□□□ -1.81
RPF1YHR088W CDC26P14724 124 aa3.73□□□□□ -1.81
RPF1YHR088W DGR2P32330 852 aa3.73□□□□□ -1.81
RPF1YHR088W EHT1P38295 451 aa3.73□□□□□ -1.81
RPF1YHR088W YMR124WP39523 943 aaKnown RBP3.73□□□□□ -1.81
RPF1YHR088W IRC7P43623 340 aa3.73□□□□□ -1.81
RPF1YHR088W MTD1Q02046 320 aaKnown RBP3.73□□□□□ -1.81
RPF1YHR088W MTQ2Q03920 221 aaPredicted RBP3.73□□□□□ -1.81
RPF1YHR088W HRD3Q05787 833 aa3.73□□□□□ -1.81
RPF1YHR088W YJU2P28320 278 aaPredicted RBP3.72□□□□□ -1.81
RPF1YHR088W PMT3P47190 753 aa3.72□□□□□ -1.81
RPF1YHR088W PEF1P53238 335 aa3.72□□□□□ -1.81
RPF1YHR088W SQS1P53866 767 aaKnown RBP3.72□□□□□ -1.81
RPF1YHR088W YPL071CQ02864 156 aa3.72□□□□□ -1.81
RPF1YHR088W THI73Q07904 523 aa3.72□□□□□ -1.81
RPF1YHR088W AHA1Q12449 350 aaKnown RBP3.72□□□□□ -1.81
RPF1YHR088W CET1O13297 549 aaPredicted RBP3.71□□□□□ -1.82
RPF1YHR088W BET2P20133 325 aa3.71□□□□□ -1.82
RPF1YHR088W CBP3P21560 335 aa3.71□□□□□ -1.82
RPF1YHR088W PPG1P32838 368 aa3.71□□□□□ -1.82
RPF1YHR088W OAF1P39720 1047 aaPredicted RBP3.71□□□□□ -1.82
RPF1YHR088W YIL024CP40543 189 aa3.71□□□□□ -1.82
RPF1YHR088W COP1P53622 1201 aaKnown RBP3.71□□□□□ -1.82
RPF1YHR088W YER190C-BP0CX94 160 aa3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 139.2 ms