RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W LRO1P40345 661 aa4.53□□□□□ -1.68
PRP18YGR006W HIS6P40545 261 aa4.53□□□□□ -1.68
PRP18YGR006W THI6P41835 540 aa4.53□□□□□ -1.68
PRP18YGR006W DAK1P54838 584 aaKnown RBP4.53□□□□□ -1.68
PRP18YGR006W CEG1Q01159 459 aaPredicted RBP4.53□□□□□ -1.68
PRP18YGR006W TIM50Q02776 476 aa4.53□□□□□ -1.68
PRP18YGR006W UFO1Q04511 668 aa4.53□□□□□ -1.68
PRP18YGR006W RKI1Q12189 258 aa4.53□□□□□ -1.68
PRP18YGR006W URA3P03962 267 aa4.52□□□□□ -1.69
PRP18YGR006W CBP3P21560 335 aa4.52□□□□□ -1.69
PRP18YGR006W KIN3P22209 435 aa4.52□□□□□ -1.69
PRP18YGR006W ARG1P22768 420 aa4.52□□□□□ -1.69
PRP18YGR006W YJL206CP39529 758 aa4.52□□□□□ -1.69
PRP18YGR006W DIP5P53388 608 aa4.52□□□□□ -1.69
PRP18YGR006W UBX4P54730 416 aa4.52□□□□□ -1.69
PRP18YGR006W VMS1Q04311 632 aaKnown RBP4.52□□□□□ -1.69
PRP18YGR006W TMN2Q04562 672 aa4.52□□□□□ -1.69
PRP18YGR006W ARR3Q06598 404 aa4.52□□□□□ -1.69
PRP18YGR006W TAF3Q12297 353 aa4.52□□□□□ -1.69
PRP18YGR006W YOL114CQ12322 202 aa4.52□□□□□ -1.69
PRP18YGR006W DBP10Q12389 995 aaKnown RBP4.52□□□□□ -1.69
PRP18YGR006W ADH4P10127 382 aa4.51□□□□□ -1.69
PRP18YGR006W MRPL7P36519 292 aa4.51□□□□□ -1.69
PRP18YGR006W SWD1P39706 426 aa4.51□□□□□ -1.69
PRP18YGR006W QRI7P43122 407 aa4.51□□□□□ -1.69
PRP18YGR006W NMA2P53204 395 aa4.51□□□□□ -1.69
PRP18YGR006W GND2P53319 492 aa4.51□□□□□ -1.69
PRP18YGR006W TEP1P53916 434 aa4.51□□□□□ -1.69
PRP18YGR006W EFR3Q03653 782 aaKnown RBP4.51□□□□□ -1.69
PRP18YGR006W CAP1P28495 268 aaKnown RBP4.5□□□□□ -1.69
PRP18YGR006W MTH1P35198 433 aa4.5□□□□□ -1.69
PRP18YGR006W UBS1P38290 277 aa4.5□□□□□ -1.69
PRP18YGR006W VPS27P40343 622 aaKnown RBP4.5□□□□□ -1.69
PRP18YGR006W CCT7P42943 550 aaKnown RBP4.5□□□□□ -1.69
PRP18YGR006W GSM1P42950 618 aa4.5□□□□□ -1.69
PRP18YGR006W SPC98P53540 846 aa4.5□□□□□ -1.69
PRP18YGR006W SNF12P53628 566 aa4.5□□□□□ -1.69
PRP18YGR006W NGL2Q03264 515 aaKnown RBP4.5□□□□□ -1.69
PRP18YGR006W MRH1Q12117 320 aaPredicted RBP4.5□□□□□ -1.69
PRP18YGR006W LAM4P38800 1345 aa4.49□□□□□ -1.69
PRP18YGR006W MSS18P08593 268 aa4.49□□□□□ -1.69
PRP18YGR006W PCK1P10963 549 aa4.49□□□□□ -1.69
PRP18YGR006W PGI1P12709 554 aaKnown RBP4.49□□□□□ -1.69
PRP18YGR006W PHO81P17442 1178 aa4.49□□□□□ -1.69
PRP18YGR006W MSH1P25846 959 aa4.49□□□□□ -1.69
PRP18YGR006W DSS4P32601 143 aa4.49□□□□□ -1.69
PRP18YGR006W YHL041WP38730 149 aa4.49□□□□□ -1.69
PRP18YGR006W PMT6P42934 759 aa4.49□□□□□ -1.69
PRP18YGR006W STU2P46675 888 aa4.49□□□□□ -1.69
PRP18YGR006W MFM1Q02783 413 aa4.49□□□□□ -1.69
PRP18YGR006W BRE1Q07457 700 aaKnown RBP4.49□□□□□ -1.69
PRP18YGR006W CRD1Q07560 283 aa4.49□□□□□ -1.69
PRP18YGR006W YPL216WQ08964 1102 aa4.49□□□□□ -1.69
PRP18YGR006W PWP2P25635 923 aaKnown RBP4.48□□□□□ -1.69
PRP18YGR006W IMA5P40884 581 aa4.48□□□□□ -1.69
PRP18YGR006W IRC10Q08118 586 aa4.48□□□□□ -1.69
PRP18YGR006W PIF1P07271 859 aa4.47□□□□□ -1.69
PRP18YGR006W GFA1P14742 717 aaKnown RBP4.47□□□□□ -1.69
PRP18YGR006W VPS34P22543 875 aa4.47□□□□□ -1.69
PRP18YGR006W PRP45P28004 379 aaPredicted RBP4.47□□□□□ -1.69
PRP18YGR006W PTH2P34222 208 aa4.47□□□□□ -1.69
PRP18YGR006W VPS24P36095 224 aaKnown RBP4.47□□□□□ -1.69
PRP18YGR006W PIH1P38768 344 aa4.47□□□□□ -1.69
PRP18YGR006W VFA1P40080 203 aa4.47□□□□□ -1.69
PRP18YGR006W MAD3P47074 515 aa4.47□□□□□ -1.69
PRP18YGR006W YDR179W-AQ03983 463 aa4.47□□□□□ -1.69
PRP18YGR006W AAD4Q07747 329 aa4.47□□□□□ -1.69
PRP18YGR006W TGS1Q12052 315 aa4.47□□□□□ -1.69
PRP18YGR006W STE4P18851 423 aa4.46□□□□□ -1.7
PRP18YGR006W BET2P20133 325 aa4.46□□□□□ -1.7
PRP18YGR006W CNE1P27825 502 aa4.46□□□□□ -1.7
PRP18YGR006W LOT5P34234 306 aa4.46□□□□□ -1.7
PRP18YGR006W CCL1P37366 393 aa4.46□□□□□ -1.7
PRP18YGR006W APM3P38153 483 aa4.46□□□□□ -1.7
PRP18YGR006W YIP4P53093 235 aa4.46□□□□□ -1.7
PRP18YGR006W VPS73P53142 486 aaKnown RBP4.46□□□□□ -1.7
PRP18YGR006W HOF1Q05080 669 aa4.46□□□□□ -1.7
PRP18YGR006W ENT2Q05785 613 aa4.46□□□□□ -1.7
PRP18YGR006W HIM1Q06674 414 aa4.46□□□□□ -1.7
PRP18YGR006W YDL073WQ07454 984 aa4.46□□□□□ -1.7
PRP18YGR006W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
PRP18YGR006W MDM20Q12387 796 aaKnown RBP4.46□□□□□ -1.7
PRP18YGR006W RPN13O13563 156 aa4.45□□□□□ -1.7
PRP18YGR006W CTT1P06115 562 aa4.45□□□□□ -1.7
PRP18YGR006W STT3P39007 718 aaKnown RBP4.45□□□□□ -1.7
PRP18YGR006W ACA1P39970 489 aa4.45□□□□□ -1.7
PRP18YGR006W BUD17P53727 317 aa4.45□□□□□ -1.7
PRP18YGR006W TRS31Q03337 283 aa4.45□□□□□ -1.7
PRP18YGR006W USA1Q03714 838 aa4.45□□□□□ -1.7
PRP18YGR006W TRS23Q03784 219 aa4.45□□□□□ -1.7
PRP18YGR006W ATG16Q03818 150 aa4.45□□□□□ -1.7
PRP18YGR006W EIS1Q05050 843 aaKnown RBP4.45□□□□□ -1.7
PRP18YGR006W PHO5P00635 467 aa4.44□□□□□ -1.7
PRP18YGR006W MIS1P09440 975 aaKnown RBP4.44□□□□□ -1.7
PRP18YGR006W SIR1P21691 654 aa4.44□□□□□ -1.7
PRP18YGR006W YMC2P38087 329 aa4.44□□□□□ -1.7
PRP18YGR006W MUP3P38734 546 aa4.44□□□□□ -1.7
PRP18YGR006W YIL166CP40445 542 aa4.44□□□□□ -1.7
PRP18YGR006W QRI1P43123 477 aaKnown RBP4.44□□□□□ -1.7
PRP18YGR006W POL31P46957 487 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms