RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W RMA1P36001 430 aaKnown RBP1.87□□□□□ -2.11
CUL3YGR003W DUN1P39009 513 aa1.87□□□□□ -2.11
CUL3YGR003W EAF5P39995 279 aa1.87□□□□□ -2.11
CUL3YGR003W PRM2P40534 656 aa1.87□□□□□ -2.11
CUL3YGR003W PXA1P41909 870 aa1.87□□□□□ -2.11
CUL3YGR003W PMT6P42934 759 aa1.87□□□□□ -2.11
CUL3YGR003W ECM38Q05902 660 aaPredicted RBP1.87□□□□□ -2.11
CUL3YGR003W NGL1Q08213 363 aaKnown RBP1.87□□□□□ -2.11
CUL3YGR003W TMA17Q12513 150 aa1.87□□□□□ -2.11
CUL3YGR003W ABF1P14164 731 aa1.86□□□□□ -2.11
CUL3YGR003W YHR033WP38690 423 aa1.86□□□□□ -2.11
CUL3YGR003W NIT2P47016 307 aa1.86□□□□□ -2.11
CUL3YGR003W YGR054WP53235 642 aaKnown RBP1.86□□□□□ -2.11
CUL3YGR003W COG6P53959 839 aa1.86□□□□□ -2.11
CUL3YGR003W YSH1Q06224 779 aaPredicted RBP1.86□□□□□ -2.11
CUL3YGR003W TSR4P25040 408 aa1.86□□□□□ -2.11
CUL3YGR003W DID4P36108 232 aa1.86□□□□□ -2.11
CUL3YGR003W MNT3P40549 630 aa1.86□□□□□ -2.11
CUL3YGR003W ATP23P53722 227 aa1.86□□□□□ -2.11
CUL3YGR003W ERG13P54839 491 aaKnown RBP1.86□□□□□ -2.11
CUL3YGR003W PTA1Q01329 785 aaPredicted RBP1.86□□□□□ -2.11
CUL3YGR003W TRS23Q03784 219 aa1.86□□□□□ -2.11
CUL3YGR003W YDR179W-AQ03983 463 aa1.86□□□□□ -2.11
CUL3YGR003W ARR3Q06598 404 aa1.86□□□□□ -2.11
CUL3YGR003W MRN1Q08925 612 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
CUL3YGR003W BMS1Q08965 1183 aaKnown RBP1.86□□□□□ -2.11
CUL3YGR003W MDM20Q12387 796 aaKnown RBP1.86□□□□□ -2.11
CUL3YGR003W HMG2P12684 1045 aa1.85□□□□□ -2.11
CUL3YGR003W ACO1P19414 778 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
CUL3YGR003W IRC5P43610 853 aa1.85□□□□□ -2.11
CUL3YGR003W PIP2P52960 996 aa1.85□□□□□ -2.11
CUL3YGR003W SPO1P53541 631 aa1.85□□□□□ -2.11
CUL3YGR003W RPS15Q01855 142 aaKnown RBP1.85□□□□□ -2.11
CUL3YGR003W UFO1Q04511 668 aa1.85□□□□□ -2.11
CUL3YGR003W YCG1Q06680 1035 aa1.85□□□□□ -2.11
CUL3YGR003W RTK1Q12100 620 aaPredicted RBP1.85□□□□□ -2.11
CUL3YGR003W FRE7Q12333 620 aa1.85□□□□□ -2.11
CUL3YGR003W YBR071WP38243 211 aa1.85□□□□□ -2.11
CUL3YGR003W JHD1P40034 492 aa1.85□□□□□ -2.11
CUL3YGR003W YIP4P53093 235 aa1.85□□□□□ -2.11
CUL3YGR003W FDC1Q03034 503 aa1.85□□□□□ -2.11
CUL3YGR003W EFR3Q03653 782 aaKnown RBP1.85□□□□□ -2.11
CUL3YGR003W NSE5Q03718 556 aa1.85□□□□□ -2.11
CUL3YGR003W ARG7Q04728 441 aa1.85□□□□□ -2.11
CUL3YGR003W YPR027CQ12079 277 aa1.85□□□□□ -2.11
CUL3YGR003W TPK2P06245 380 aa1.84□□□□□ -2.11
CUL3YGR003W SEC15P22224 910 aa1.84□□□□□ -2.11
CUL3YGR003W PLC1P32383 869 aa1.84□□□□□ -2.11
CUL3YGR003W TFC4P33339 1025 aa1.84□□□□□ -2.11
CUL3YGR003W YPT10P38146 199 aa1.84□□□□□ -2.11
CUL3YGR003W PPE1P38796 400 aa1.84□□□□□ -2.11
CUL3YGR003W DUG1P43616 481 aaKnown RBP1.84□□□□□ -2.11
CUL3YGR003W BFA1P47113 574 aa1.84□□□□□ -2.11
CUL3YGR003W YGL117WP53133 265 aa1.84□□□□□ -2.11
CUL3YGR003W YOR378WQ08902 515 aa1.84□□□□□ -2.11
CUL3YGR003W SEC3P33332 1336 aaKnown RBP1.84□□□□□ -2.12
CUL3YGR003W YEL076C-AP0CX16 216 aa1.83□□□□□ -2.12
CUL3YGR003W YLR464WP0CX17 216 aa1.83□□□□□ -2.12
CUL3YGR003W PRP22P24384 1145 aaKnown RBP1.83□□□□□ -2.12
CUL3YGR003W HEM12P32347 362 aaPredicted RBP1.83□□□□□ -2.12
CUL3YGR003W APL3P38065 1025 aa1.83□□□□□ -2.12
CUL3YGR003W SDS24P38314 527 aa1.83□□□□□ -2.12
CUL3YGR003W YEL076CP39971 216 aa1.83□□□□□ -2.12
CUL3YGR003W LRO1P40345 661 aa1.83□□□□□ -2.12
CUL3YGR003W NMD5P46970 1048 aa1.83□□□□□ -2.12
CUL3YGR003W MNT2P53059 558 aa1.83□□□□□ -2.12
CUL3YGR003W BUD17P53727 317 aa1.83□□□□□ -2.12
CUL3YGR003W FOL1P53848 824 aa1.83□□□□□ -2.12
CUL3YGR003W YNL018CP53976 612 aa1.83□□□□□ -2.12
CUL3YGR003W YTH1Q06102 208 aaPredicted RBP1.83□□□□□ -2.12
CUL3YGR003W CWC2Q12046 339 aaPredicted RBP1.83□□□□□ -2.12
CUL3YGR003W ARG1P22768 420 aa1.83□□□□□ -2.12
CUL3YGR003W AAD3P25612 363 aa1.83□□□□□ -2.12
CUL3YGR003W NTH1P32356 751 aa1.83□□□□□ -2.12
CUL3YGR003W MAD2P40958 196 aa1.83□□□□□ -2.12
CUL3YGR003W MTD1Q02046 320 aaKnown RBP1.83□□□□□ -2.12
CUL3YGR003W SKY1Q03656 742 aa1.83□□□□□ -2.12
CUL3YGR003W DIN7Q12086 430 aa1.83□□□□□ -2.12
CUL3YGR003W PRS5Q12265 496 aaKnown RBP1.83□□□□□ -2.12
CUL3YGR003W RMP1Q12530 201 aa1.83□□□□□ -2.12
CUL3YGR003W COX11P19516 300 aaKnown RBP1.82□□□□□ -2.12
CUL3YGR003W HOP1P20050 605 aa1.82□□□□□ -2.12
CUL3YGR003W CNE1P27825 502 aa1.82□□□□□ -2.12
CUL3YGR003W DGR2P32330 852 aa1.82□□□□□ -2.12
CUL3YGR003W STB5P38699 743 aa1.82□□□□□ -2.12
CUL3YGR003W RNR4P49723 345 aaKnown RBP1.82□□□□□ -2.12
CUL3YGR003W PEF1P53238 335 aa1.82□□□□□ -2.12
CUL3YGR003W TGL2P54857 326 aa1.82□□□□□ -2.12
CUL3YGR003W USA1Q03714 838 aa1.82□□□□□ -2.12
CUL3YGR003W HLR1Q04429 423 aa1.82□□□□□ -2.12
CUL3YGR003W PCL8Q08966 492 aa1.82□□□□□ -2.12
CUL3YGR003W URA3P03962 267 aa1.82□□□□□ -2.12
CUL3YGR003W PCK1P10963 549 aa1.82□□□□□ -2.12
CUL3YGR003W AEP2P22136 580 aa1.82□□□□□ -2.12
CUL3YGR003W SNO3P43544 222 aa1.82□□□□□ -2.12
CUL3YGR003W YNL092WP53934 400 aa1.82□□□□□ -2.12
CUL3YGR003W YNL034WP53963 612 aa1.82□□□□□ -2.12
CUL3YGR003W MFM1Q02783 413 aa1.82□□□□□ -2.12
CUL3YGR003W PPN1Q04119 674 aa1.82□□□□□ -2.12
CUL3YGR003W Q0010Q9ZZX9 128 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 54.3 ms