RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W KGD2P19262 463 aaPredicted RBP5.68□□□□□ -1.5
SHE10YGL228W PEX1P24004 1043 aa5.68□□□□□ -1.5
SHE10YGL228W MGT1P26188 188 aa5.68□□□□□ -1.5
SHE10YGL228W RAD27P26793 382 aa5.68□□□□□ -1.5
SHE10YGL228W TPS2P31688 896 aaKnown RBP5.68□□□□□ -1.5
SHE10YGL228W NFU1P32860 256 aa5.68□□□□□ -1.5
SHE10YGL228W RGD2P43556 714 aa5.68□□□□□ -1.5
SHE10YGL228W CEG1Q01159 459 aaPredicted RBP5.68□□□□□ -1.5
SHE10YGL228W MTD1Q02046 320 aaKnown RBP5.68□□□□□ -1.5
SHE10YGL228W GCN5Q03330 439 aa5.68□□□□□ -1.5
SHE10YGL228W CIR2Q08822 631 aa5.68□□□□□ -1.5
SHE10YGL228W AHC1Q12433 566 aa5.68□□□□□ -1.5
SHE10YGL228W PYC1P11154 1178 aaKnown RBP5.67□□□□□ -1.5
SHE10YGL228W PEP5P12868 1029 aa5.67□□□□□ -1.5
SHE10YGL228W SPO16P17122 198 aa5.67□□□□□ -1.5
SHE10YGL228W MET16P18408 261 aaPredicted RBP5.67□□□□□ -1.5
SHE10YGL228W RGR1P19263 1082 aa5.67□□□□□ -1.5
SHE10YGL228W PDE1P22434 369 aa5.67□□□□□ -1.5
SHE10YGL228W DAL1P32375 460 aa5.67□□□□□ -1.5
SHE10YGL228W HSP78P33416 811 aa5.67□□□□□ -1.5
SHE10YGL228W MUD2P36084 527 aaKnown RBP5.67□□□□□ -1.5
SHE10YGL228W YKR051WP36142 418 aa5.67□□□□□ -1.5
SHE10YGL228W POP4P38336 279 aa5.67□□□□□ -1.5
SHE10YGL228W MSC7P38694 644 aa5.67□□□□□ -1.5
SHE10YGL228W INA22P40576 216 aa5.67□□□□□ -1.5
SHE10YGL228W MCM6P53091 1017 aaKnown RBP5.67□□□□□ -1.5
SHE10YGL228W RPL22BP56628 122 aaKnown RBP5.67□□□□□ -1.5
SHE10YGL228W ARA2Q04212 335 aa5.67□□□□□ -1.5
SHE10YGL228W AIM32Q04689 311 aa5.67□□□□□ -1.5
SHE10YGL228W AAD4Q07747 329 aa5.67□□□□□ -1.5
SHE10YGL228W APC5Q08683 685 aa5.67□□□□□ -1.5
SHE10YGL228W LCB4Q12246 624 aa5.67□□□□□ -1.5
SHE10YGL228W ARP7Q12406 477 aa5.67□□□□□ -1.5
SHE10YGL228W CCP1P00431 361 aa5.66□□□□□ -1.5
SHE10YGL228W CMD1P06787 147 aaKnown RBP5.66□□□□□ -1.5
SHE10YGL228W RPB2P08518 1224 aaKnown RBP5.66□□□□□ -1.5
SHE10YGL228W YIH1P25637 258 aa5.66□□□□□ -1.5
SHE10YGL228W YBR225WP38321 900 aa5.66□□□□□ -1.5
SHE10YGL228W CCT2P39076 527 aaKnown RBP5.66□□□□□ -1.5
SHE10YGL228W VPS25P47142 202 aa5.66□□□□□ -1.5
SHE10YGL228W PEX31P53203 462 aa5.66□□□□□ -1.5
SHE10YGL228W YGR127WP53275 312 aa5.66□□□□□ -1.5
SHE10YGL228W HEH2Q03281 663 aa5.66□□□□□ -1.5
SHE10YGL228W SND1Q04007 877 aa5.66□□□□□ -1.5
SHE10YGL228W MPC54Q08550 464 aa5.66□□□□□ -1.5
SHE10YGL228W CCH1P50077 2039 aa5.66□□□□□ -1.5
SHE10YGL228W SPE1P08432 466 aa5.65□□□□□ -1.5
SHE10YGL228W HEM15P16622 393 aa5.65□□□□□ -1.5
SHE10YGL228W YBP1P38315 674 aa5.65□□□□□ -1.5
SHE10YGL228W RGD1P38339 666 aa5.65□□□□□ -1.5
SHE10YGL228W STB5P38699 743 aa5.65□□□□□ -1.5
SHE10YGL228W FSH1P38777 243 aaKnown RBP5.65□□□□□ -1.5
SHE10YGL228W AIM18P38884 321 aa5.65□□□□□ -1.5
SHE10YGL228W SMX2P40204 77 aaKnown RBP5.65□□□□□ -1.5
SHE10YGL228W ATM1P40416 690 aa5.65□□□□□ -1.5
SHE10YGL228W CNN1P43618 361 aa5.65□□□□□ -1.5
SHE10YGL228W YJR039WP47107 1121 aa5.65□□□□□ -1.5
SHE10YGL228W HLJ1P48353 224 aa5.65□□□□□ -1.5
SHE10YGL228W RFX1P48743 811 aa5.65□□□□□ -1.5
SHE10YGL228W YMR160WQ03823 816 aa5.65□□□□□ -1.5
SHE10YGL228W YLR257WQ06146 321 aaKnown RBP5.65□□□□□ -1.5
SHE10YGL228W CDC73Q06697 393 aa5.65□□□□□ -1.5
SHE10YGL228W TPO1Q07824 586 aa5.65□□□□□ -1.5
SHE10YGL228W YOR223WQ12015 292 aa5.65□□□□□ -1.5
SHE10YGL228W YLL056CQ12177 298 aa5.65□□□□□ -1.5
SHE10YGL228W AVL9Q12500 764 aa5.65□□□□□ -1.5
SHE10YGL228W ADH4P10127 382 aa5.65□□□□□ -1.51
SHE10YGL228W RAD16P31244 790 aa5.65□□□□□ -1.51
SHE10YGL228W PTC3P34221 468 aaKnown RBP5.65□□□□□ -1.51
SHE10YGL228W DIA4P38705 446 aaPredicted RBP5.65□□□□□ -1.51
SHE10YGL228W PPE1P38796 400 aa5.65□□□□□ -1.51
SHE10YGL228W CKB2P38930 258 aa5.65□□□□□ -1.51
SHE10YGL228W PRM9P39551 298 aa5.65□□□□□ -1.51
SHE10YGL228W STL1P39932 569 aa5.65□□□□□ -1.51
SHE10YGL228W CTK3P46963 296 aaPredicted RBP5.65□□□□□ -1.51
SHE10YGL228W URB2P47108 1174 aa5.65□□□□□ -1.51
SHE10YGL228W CPR6P53691 371 aaKnown RBP5.65□□□□□ -1.51
SHE10YGL228W YNL034WP53963 612 aa5.65□□□□□ -1.51
SHE10YGL228W YNL018CP53976 612 aa5.65□□□□□ -1.51
SHE10YGL228W PIR3Q03180 325 aa5.65□□□□□ -1.51
SHE10YGL228W USA1Q03714 838 aa5.65□□□□□ -1.51
SHE10YGL228W STE23Q06010 1027 aa5.65□□□□□ -1.51
SHE10YGL228W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.65□□□□□ -1.51not detected
SHE10YGL228W MNL2Q12205 849 aa5.65□□□□□ -1.51
SHE10YGL228W NDJ1Q12366 352 aa5.65□□□□□ -1.51
SHE10YGL228W POL3P15436 1097 aa5.64□□□□□ -1.51
SHE10YGL228W CDC20P26309 610 aa5.64□□□□□ -1.51
SHE10YGL228W UTR2P32623 467 aa5.64□□□□□ -1.51
SHE10YGL228W TSA1P34760 196 aaKnown RBP5.64□□□□□ -1.51
SHE10YGL228W BIT2P38346 545 aa5.64□□□□□ -1.51
SHE10YGL228W URA8P38627 578 aaPredicted RBP5.64□□□□□ -1.51
SHE10YGL228W MSR1P38714 643 aa5.64□□□□□ -1.51
SHE10YGL228W OTU2P38747 307 aaKnown RBP5.64□□□□□ -1.51
SHE10YGL228W LAM1P38851 1228 aa5.64□□□□□ -1.51
SHE10YGL228W CIN4P39110 191 aa5.64□□□□□ -1.51
SHE10YGL228W EDC3P39998 551 aaKnown RBP5.64□□□□□ -1.51
SHE10YGL228W MMF1P40185 145 aaKnown RBP5.64□□□□□ -1.51
SHE10YGL228W ALA1P40825 983 aaKnown RBP5.64□□□□□ -1.51
SHE10YGL228W SNG1P46950 547 aa5.64□□□□□ -1.51
SHE10YGL228W TAH11P47112 604 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms