RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	COQ9	Q05779	260 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	RRI2	Q12348	645 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	FOB1	O13329	566 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	TUF1	P02992	437 aa	Known RBP	5.59	□□□□□ -1.51
VTC2	YFL004W	HMG2	P12684	1045 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	RNR3	P21672	869 aa	Known RBP	5.59	□□□□□ -1.51
VTC2	YFL004W	AAD3	P25612	363 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	MCM5	P29496	775 aa	Known RBP	5.59	□□□□□ -1.51
VTC2	YFL004W	ZIP1	P31111	875 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	SMI1	P32566	505 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	APD1	P38281	316 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	HIS2	P38635	335 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	RRP8	P38961	392 aa	Known RBP	5.59	□□□□□ -1.51
VTC2	YFL004W	STT3	P39007	718 aa	Known RBP	5.59	□□□□□ -1.51
VTC2	YFL004W	SER3	P40054	469 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	HXT8	P40886	569 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	SVF1	Q05515	481 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	CDA1	Q06702	301 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	YDL073W	Q07454	984 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	PUS7	Q08647	676 aa	Known RBP	5.59	□□□□□ -1.51
VTC2	YFL004W	OXR1	Q08952	273 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	RCN2	Q12044	265 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	MAK16	P10962	306 aa	Predicted RBP	5.58	□□□□□ -1.52
VTC2	YFL004W	SIT4	P20604	311 aa		5.58	□□□□□ -1.52
VTC2	YFL004W	YJU3	P28321	313 aa		5.58	□□□□□ -1.52
VTC2	YFL004W	MAE1	P36013	669 aa	Known RBP	5.58	□□□□□ -1.52
VTC2	YFL004W	PET10	P36139	283 aa		5.58	□□□□□ -1.52
VTC2	YFL004W	RRT2	P38332	387 aa		5.58	□□□□□ -1.52
VTC2	YFL004W	UBP5	P39944	805 aa		5.58	□□□□□ -1.52
VTC2	YFL004W	ALA1	P40825	983 aa	Known RBP	5.58	□□□□□ -1.52
VTC2	YFL004W	IRC6	P43615	237 aa		5.58	□□□□□ -1.52
VTC2	YFL004W	BIR1	P47134	954 aa		5.58	□□□□□ -1.52
VTC2	YFL004W	IMD3	P50095	523 aa	Known RBP	5.58	□□□□□ -1.52
VTC2	YFL004W	YNL058C	P53947	316 aa		5.58	□□□□□ -1.52
VTC2	YFL004W	ISU1	Q03020	165 aa		5.58	□□□□□ -1.52
VTC2	YFL004W	CLU1	Q03690	1277 aa	Known RBP	5.58	□□□□□ -1.52
VTC2	YFL004W	YMR027W	Q04371	470 aa		5.58	□□□□□ -1.52
VTC2	YFL004W	MCH5	Q08777	521 aa		5.58	□□□□□ -1.52
VTC2	YFL004W	BAG7	Q12128	409 aa		5.58	□□□□□ -1.52
VTC2	YFL004W	RPN13	O13563	156 aa		5.58	□□□□□ -1.52
VTC2	YFL004W	ATP2	P00830	511 aa	Known RBP	5.58	□□□□□ -1.52
VTC2	YFL004W	MRP13	P12686	339 aa		5.58	□□□□□ -1.52
VTC2	YFL004W	MSD1	P15179	658 aa	Known RBP	5.58	□□□□□ -1.52
VTC2	YFL004W	YAP1	P19880	650 aa	Known RBP	5.58	□□□□□ -1.52
VTC2	YFL004W	VPS3	P23643	1011 aa		5.58	□□□□□ -1.52
VTC2	YFL004W	SNT1	P25357	1226 aa		5.58	□□□□□ -1.52
VTC2	YFL004W	CAP1	P28495	268 aa	Known RBP	5.58	□□□□□ -1.52
VTC2	YFL004W	TFC1	P32367	649 aa		5.58	□□□□□ -1.52
VTC2	YFL004W	HBS1	P32769	611 aa	Known RBP	5.58	□□□□□ -1.52
VTC2	YFL004W	YKL023W	P36103	277 aa	Known RBP	5.58	□□□□□ -1.52
VTC2	YFL004W	PAM1	P37304	830 aa	Known RBP	5.58	□□□□□ -1.52
VTC2	YFL004W	YBR139W	P38109	508 aa		5.58	□□□□□ -1.52
VTC2	YFL004W	FRT2	P39734	528 aa		5.58	□□□□□ -1.52
VTC2	YFL004W	NOG1	Q02892	647 aa	Known RBP	5.58	□□□□□ -1.52
VTC2	YFL004W	CEF1	Q03654	590 aa	Predicted RBP	5.58	□□□□□ -1.52
VTC2	YFL004W	ASA1	Q06822	443 aa		5.58	□□□□□ -1.52
VTC2	YFL004W	YLR031W	Q07978	186 aa		5.58	□□□□□ -1.52
VTC2	YFL004W	YLR053C	Q12026	108 aa		5.58	□□□□□ -1.52
VTC2	YFL004W	ILS1	P09436	1072 aa	Known RBP	5.57	□□□□□ -1.52
VTC2	YFL004W	PRP19	P32523	503 aa	Known RBP	5.57	□□□□□ -1.52
VTC2	YFL004W	PEP12	P32854	288 aa		5.57	□□□□□ -1.52
VTC2	YFL004W	SSO1	P32867	290 aa		5.57	□□□□□ -1.52
VTC2	YFL004W	YPK3	P38070	525 aa		5.57	□□□□□ -1.52
VTC2	YFL004W	SPL2	P38839	148 aa		5.57	□□□□□ -1.52
VTC2	YFL004W	UTP9	P38882	575 aa	Known RBP	5.57	□□□□□ -1.52
VTC2	YFL004W	HAL5	P38970	855 aa	Known RBP	5.57	□□□□□ -1.52
VTC2	YFL004W	DSE1	P40077	573 aa		5.57	□□□□□ -1.52
VTC2	YFL004W	YTA12	P40341	825 aa		5.57	□□□□□ -1.52
VTC2	YFL004W	UBP7	P40453	1071 aa		5.57	□□□□□ -1.52
VTC2	YFL004W	CSM2	P40465	213 aa		5.57	□□□□□ -1.52
VTC2	YFL004W	XKS1	P42826	600 aa		5.57	□□□□□ -1.52
VTC2	YFL004W	ASE1	P50275	885 aa		5.57	□□□□□ -1.52
VTC2	YFL004W	PAN2	P53010	1115 aa	Predicted RBP	5.57	□□□□□ -1.52
VTC2	YFL004W	DIP5	P53388	608 aa		5.57	□□□□□ -1.52
VTC2	YFL004W	YTP1	P53584	459 aa		5.57	□□□□□ -1.52
VTC2	YFL004W	RPS15	Q01855	142 aa	Known RBP	5.57	□□□□□ -1.52
VTC2	YFL004W	SKI8	Q02793	397 aa	Predicted RBP	5.57	□□□□□ -1.52
VTC2	YFL004W	BRE4	Q07660	1125 aa		5.57	□□□□□ -1.52
VTC2	YFL004W	AI5_ALPHA	Q9ZZX1	630 aa		5.57	□□□□□ -1.52
VTC2	YFL004W	GPA2	P10823	449 aa		5.57	□□□□□ -1.52
VTC2	YFL004W	SAN1	P22470	610 aa		5.57	□□□□□ -1.52
VTC2	YFL004W	CRM1	P30822	1084 aa	Known RBP	5.57	□□□□□ -1.52
VTC2	YFL004W	KTR2	P33550	425 aa		5.57	□□□□□ -1.52
VTC2	YFL004W	SEO1	P39709	593 aa		5.57	□□□□□ -1.52
VTC2	YFL004W	ALG2	P43636	503 aa		5.57	□□□□□ -1.52
VTC2	YFL004W	PGA2	P53903	129 aa		5.57	□□□□□ -1.52
VTC2	YFL004W	SPE3	Q12074	293 aa	Known RBP	5.57	□□□□□ -1.52
VTC2	YFL004W	ARP6	Q12509	438 aa		5.57	□□□□□ -1.52
VTC2	YFL004W	ADF1	Q2V2Q1	113 aa		5.57	□□□□□ -1.52
VTC2	YFL004W	PEX1	P24004	1043 aa		5.56	□□□□□ -1.52
VTC2	YFL004W	CMK1	P27466	446 aa	Known RBP	5.56	□□□□□ -1.52
VTC2	YFL004W	TPS2	P31688	896 aa	Known RBP	5.56	□□□□□ -1.52
VTC2	YFL004W	ANP1	P32629	500 aa		5.56	□□□□□ -1.52
VTC2	YFL004W	DOM34	P33309	386 aa		5.56	□□□□□ -1.52
VTC2	YFL004W	CCL1	P37366	393 aa		5.56	□□□□□ -1.52
VTC2	YFL004W	YBR285W	P38354	144 aa		5.56	□□□□□ -1.52
VTC2	YFL004W	LSM12	P38828	187 aa	Known RBP	5.56	□□□□□ -1.52
VTC2	YFL004W	SSP120	P39931	234 aa	Known RBP	5.56	□□□□□ -1.52
VTC2	YFL004W	PSY2	P40164	858 aa		5.56	□□□□□ -1.52
VTC2	YFL004W	SAD1	P43589	448 aa		5.56	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms