RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C PXA2P34230 853 aa4.48□□□□□ -1.69
SPB4YFL002C CDS1P38221 457 aa4.48□□□□□ -1.69
SPB4YFL002C TPA1P40032 644 aaKnown RBP4.48□□□□□ -1.69
SPB4YFL002C COX18P53239 316 aa4.48□□□□□ -1.69
SPB4YFL002C BSC5P53755 489 aa4.48□□□□□ -1.69
SPB4YFL002C ZRT2Q12436 422 aa4.48□□□□□ -1.69
SPB4YFL002C HSP82P02829 709 aaKnown RBP4.47□□□□□ -1.69
SPB4YFL002C TUF1P02992 437 aaKnown RBP4.47□□□□□ -1.69
SPB4YFL002C OLE1P21147 510 aaKnown RBP4.47□□□□□ -1.69
SPB4YFL002C KIN82P25341 720 aa4.47□□□□□ -1.69
SPB4YFL002C PGM1P33401 570 aaKnown RBP4.47□□□□□ -1.69
SPB4YFL002C RMD8P43620 662 aa4.47□□□□□ -1.69
SPB4YFL002C CHA4P43634 648 aa4.47□□□□□ -1.69
SPB4YFL002C SIP4P46954 829 aa4.47□□□□□ -1.69
SPB4YFL002C POL31P46957 487 aa4.47□□□□□ -1.69
SPB4YFL002C NOP9P47077 666 aaKnown RBP4.47□□□□□ -1.69
SPB4YFL002C YDL183CP48569 320 aa4.47□□□□□ -1.69
SPB4YFL002C TEL2P53038 688 aa4.47□□□□□ -1.69
SPB4YFL002C NCS6P53088 359 aa4.47□□□□□ -1.69
SPB4YFL002C SPO1P53541 631 aa4.47□□□□□ -1.69
SPB4YFL002C ARE2P53629 642 aaKnown RBP4.47□□□□□ -1.69
SPB4YFL002C ATG21Q02887 496 aa4.47□□□□□ -1.69
SPB4YFL002C UTP21Q06078 939 aaPredicted RBP4.47□□□□□ -1.69
SPB4YFL002C POM34Q12445 299 aa4.47□□□□□ -1.69
SPB4YFL002C TPK1P06244 397 aa4.46□□□□□ -1.69
SPB4YFL002C HIS5P07172 385 aa4.46□□□□□ -1.69
SPB4YFL002C GCD1P09032 578 aaPredicted RBP4.46□□□□□ -1.69
SPB4YFL002C SGF29P25554 259 aa4.46□□□□□ -1.69
SPB4YFL002C COQ2P32378 372 aa4.46□□□□□ -1.69
SPB4YFL002C RPS0AP32905 252 aaKnown RBP4.46□□□□□ -1.69
SPB4YFL002C ORC3P54790 616 aa4.46□□□□□ -1.69
SPB4YFL002C FCP1Q03254 732 aa4.46□□□□□ -1.69
SPB4YFL002C RCF1Q03713 159 aa4.46□□□□□ -1.69
SPB4YFL002C ADY4Q05955 493 aa4.46□□□□□ -1.69
SPB4YFL002C YDR215CQ12240 137 aa4.46□□□□□ -1.69
SPB4YFL002C COX17Q12287 69 aa4.46□□□□□ -1.69
SPB4YFL002C PCD1Q12524 340 aa4.46□□□□□ -1.69
SPB4YFL002C SAC6P32599 642 aaKnown RBP4.46□□□□□ -1.7
SPB4YFL002C CTF13P35203 478 aa4.46□□□□□ -1.7
SPB4YFL002C SKN7P38889 622 aa4.46□□□□□ -1.7
SPB4YFL002C CRG1P38892 291 aaRIP-Chip data4.46□□□□□ -1.7not detected
SPB4YFL002C NPR2P39923 615 aa4.46□□□□□ -1.7
SPB4YFL002C VFA1P40080 203 aa4.46□□□□□ -1.7
SPB4YFL002C FTR1P40088 404 aa4.46□□□□□ -1.7
SPB4YFL002C YJR061WP40355 935 aa4.46□□□□□ -1.7
SPB4YFL002C GTF1P53260 183 aaPredicted RBP4.46□□□□□ -1.7
SPB4YFL002C MFB1Q04922 465 aa4.46□□□□□ -1.7
SPB4YFL002C GPB1Q08886 897 aa4.46□□□□□ -1.7
SPB4YFL002C SKM1Q12469 655 aa4.46□□□□□ -1.7
SPB4YFL002C RPS9BP05755 195 aaKnown RBP4.45□□□□□ -1.7
SPB4YFL002C RPL19AP0CX82 189 aaKnown RBP4.45□□□□□ -1.7
SPB4YFL002C RPL19BP0CX83 189 aaPredicted RBP4.45□□□□□ -1.7
SPB4YFL002C CKA1P15790 372 aa4.45□□□□□ -1.7
SPB4YFL002C ERG6P25087 383 aaKnown RBP4.45□□□□□ -1.7
SPB4YFL002C PRP45P28004 379 aaPredicted RBP4.45□□□□□ -1.7
SPB4YFL002C SFB3P38810 929 aa4.45□□□□□ -1.7
SPB4YFL002C SLN1P39928 1220 aaPredicted RBP4.45□□□□□ -1.7
SPB4YFL002C GCV2P49095 1034 aa4.45□□□□□ -1.7
SPB4YFL002C TRS31Q03337 283 aa4.45□□□□□ -1.7
SPB4YFL002C PLB2Q03674 706 aa4.45□□□□□ -1.7
SPB4YFL002C VPS64Q03944 604 aa4.45□□□□□ -1.7
SPB4YFL002C DIA2Q08496 732 aaPredicted RBP4.45□□□□□ -1.7
SPB4YFL002C ICL2Q12031 575 aa4.45□□□□□ -1.7
SPB4YFL002C AIM41Q12032 185 aa4.45□□□□□ -1.7
SPB4YFL002C NBP2Q12163 236 aa4.45□□□□□ -1.7
SPB4YFL002C YLR122CQ12312 125 aa4.45□□□□□ -1.7
SPB4YFL002C ECM3Q99252 613 aa4.45□□□□□ -1.7
SPB4YFL002C YCK2P23292 546 aaKnown RBP4.44□□□□□ -1.7
SPB4YFL002C CDC60P26637 1090 aaKnown RBP4.44□□□□□ -1.7
SPB4YFL002C RPP1P38786 293 aa4.44□□□□□ -1.7
SPB4YFL002C ARF3P40994 183 aaRIP-Chip data4.44□□□□□ -1.7not detected
SPB4YFL002C CIR1P42940 261 aa4.44□□□□□ -1.7
SPB4YFL002C ARC1P46672 376 aaKnown RBP4.44□□□□□ -1.7
SPB4YFL002C YML6P51998 286 aa4.44□□□□□ -1.7
SPB4YFL002C TEX1P53851 422 aaKnown RBP4.44□□□□□ -1.7
SPB4YFL002C SLU7Q02775 382 aaKnown RBP4.44□□□□□ -1.7
SPB4YFL002C PEX19Q07418 342 aa4.44□□□□□ -1.7
SPB4YFL002C HRP1Q99383 534 aaKnown RBP4.44□□□□□ -1.7
SPB4YFL002C GCN4P03069 281 aa4.44□□□□□ -1.7
SPB4YFL002C BYE1P36106 594 aa4.44□□□□□ -1.7
SPB4YFL002C TAT1P38085 619 aa4.44□□□□□ -1.7
SPB4YFL002C APE4P38821 490 aa4.44□□□□□ -1.7
SPB4YFL002C GET2P40056 285 aa4.44□□□□□ -1.7
SPB4YFL002C AXL1P40851 1208 aa4.44□□□□□ -1.7
SPB4YFL002C DUO1P53168 247 aaKnown RBP4.44□□□□□ -1.7
SPB4YFL002C YPL071CQ02864 156 aa4.44□□□□□ -1.7
SPB4YFL002C NRG1Q03125 231 aa4.44□□□□□ -1.7
SPB4YFL002C ROT1Q03691 256 aa4.44□□□□□ -1.7
SPB4YFL002C GAD1Q04792 585 aa4.44□□□□□ -1.7
SPB4YFL002C AIM6Q07716 390 aa4.44□□□□□ -1.7
SPB4YFL002C SUL2Q12325 893 aa4.44□□□□□ -1.7
SPB4YFL002C YLR302CO13544 120 aa4.43□□□□□ -1.7
SPB4YFL002C RED1P14291 827 aa4.43□□□□□ -1.7
SPB4YFL002C SEC15P22224 910 aa4.43□□□□□ -1.7
SPB4YFL002C PEX1P24004 1043 aa4.43□□□□□ -1.7
SPB4YFL002C IST3P40565 148 aaPredicted RBP4.43□□□□□ -1.7
SPB4YFL002C COG1P53079 417 aa4.43□□□□□ -1.7
SPB4YFL002C HMI1Q12039 706 aa4.43□□□□□ -1.7
SPB4YFL002C TGL5Q12043 749 aa4.43□□□□□ -1.7
SPB4YFL002C HUA2Q12134 243 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms