RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C FAP7Q12055 197 aaPredicted RBP11.24□□□□□ -0.61
SPC25YER018C IZH4Q99393 312 aa11.24□□□□□ -0.61
SPC25YER018C CCP1P00431 361 aa11.23□□□□□ -0.61
SPC25YER018C YIH1P25637 258 aa11.23□□□□□ -0.61
SPC25YER018C LTV1P34078 463 aa11.23□□□□□ -0.61
SPC25YER018C YKR051WP36142 418 aa11.23□□□□□ -0.61
SPC25YER018C HLJ1P48353 224 aa11.23□□□□□ -0.61
SPC25YER018C YNL144CP53907 740 aa11.23□□□□□ -0.61
SPC25YER018C PMT7Q06644 662 aa11.23□□□□□ -0.61
SPC25YER018C YDL073WQ07454 984 aa11.23□□□□□ -0.61
SPC25YER018C HSP78P33416 811 aa11.22□□□□□ -0.61
SPC25YER018C PRM9P39551 298 aa11.22□□□□□ -0.61
SPC25YER018C INA22P40576 216 aa11.22□□□□□ -0.61
SPC25YER018C RRT5P43607 289 aa11.22□□□□□ -0.61
SPC25YER018C BFA1P47113 574 aa11.22□□□□□ -0.61
SPC25YER018C UTP8P53276 713 aaKnown RBP11.22□□□□□ -0.61
SPC25YER018C YNL034WP53963 612 aa11.22□□□□□ -0.61
SPC25YER018C YNL018CP53976 612 aa11.22□□□□□ -0.61
SPC25YER018C AIM32Q04689 311 aa11.22□□□□□ -0.61
SPC25YER018C NDJ1Q12366 352 aa11.22□□□□□ -0.61
SPC25YER018C CDC24P11433 854 aaPredicted RBP11.21□□□□□ -0.61
SPC25YER018C MET16P18408 261 aaPredicted RBP11.21□□□□□ -0.61
SPC25YER018C PLC1P32383 869 aa11.21□□□□□ -0.61
SPC25YER018C STB5P38699 743 aa11.21□□□□□ -0.61
SPC25YER018C FSH1P38777 243 aaKnown RBP11.21□□□□□ -0.61
SPC25YER018C BTT1P40314 149 aaPredicted RBP11.21□□□□□ -0.61
SPC25YER018C CNN1P43618 361 aa11.21□□□□□ -0.61
SPC25YER018C YGR127WP53275 312 aa11.21□□□□□ -0.61
SPC25YER018C COP1P53622 1201 aaKnown RBP11.21□□□□□ -0.61
SPC25YER018C RPL22BP56628 122 aaKnown RBP11.21□□□□□ -0.61
SPC25YER018C SEY1Q99287 776 aa11.21□□□□□ -0.61
SPC25YER018C MGT1P26188 188 aa11.2□□□□□ -0.62
SPC25YER018C RAD16P31244 790 aa11.2□□□□□ -0.62
SPC25YER018C BIT2P38346 545 aa11.2□□□□□ -0.62
SPC25YER018C DIA4P38705 446 aaPredicted RBP11.2□□□□□ -0.62
SPC25YER018C LAM1P38851 1228 aa11.2□□□□□ -0.62
SPC25YER018C STL1P39932 569 aa11.2□□□□□ -0.62
SPC25YER018C MNN11P46985 422 aaKnown RBP11.2□□□□□ -0.62
SPC25YER018C RSM26P47141 266 aa11.2□□□□□ -0.62
SPC25YER018C RFX1P48743 811 aa11.2□□□□□ -0.62
SPC25YER018C ARA2Q04212 335 aa11.2□□□□□ -0.62
SPC25YER018C YLL056CQ12177 298 aa11.2□□□□□ -0.62
SPC25YER018C SVS1Q12254 260 aa11.2□□□□□ -0.62
SPC25YER018C RRD2Q12461 358 aa11.2□□□□□ -0.62
SPC25YER018C GCR1P07261 785 aa11.19□□□□□ -0.62
SPC25YER018C YML002WP0CF17 737 aa11.19□□□□□ -0.62
SPC25YER018C SYN8P31377 255 aa11.19□□□□□ -0.62
SPC25YER018C RPC37P36121 282 aa11.19□□□□□ -0.62
SPC25YER018C AIM18P38884 321 aa11.19□□□□□ -0.62
SPC25YER018C NUP60P39705 539 aa11.19□□□□□ -0.62
SPC25YER018C SAP1P39955 897 aaKnown RBP11.19□□□□□ -0.62
SPC25YER018C CPR6P53691 371 aaKnown RBP11.19□□□□□ -0.62
SPC25YER018C PIG1Q06216 648 aa11.19□□□□□ -0.62
SPC25YER018C PUF2Q12221 1075 aaKnown RBP RIP-Chip data11.19□□□□□ -0.62not detected
SPC25YER018C EFG1Q3E705 233 aaKnown RBP11.19□□□□□ -0.62
SPC25YER018C YKL068W-AQ3E826 78 aa11.19□□□□□ -0.62
SPC25YER018C RAD1P06777 1100 aa11.18□□□□□ -0.62
SPC25YER018C CMD1P06787 147 aaKnown RBP11.18□□□□□ -0.62
SPC25YER018C CBF1P17106 351 aa11.18□□□□□ -0.62
SPC25YER018C DUG2P38149 878 aa11.18□□□□□ -0.62
SPC25YER018C URA8P38627 578 aaPredicted RBP11.18□□□□□ -0.62
SPC25YER018C SFB3P38810 929 aa11.18□□□□□ -0.62
SPC25YER018C CKB2P38930 258 aa11.18□□□□□ -0.62
SPC25YER018C EMW1P42842 904 aaKnown RBP11.18□□□□□ -0.62
SPC25YER018C NMA111P53920 997 aa11.18□□□□□ -0.62
SPC25YER018C PNP1Q05788 311 aa11.18□□□□□ -0.62
SPC25YER018C LPX1Q12405 387 aaKnown RBP11.18□□□□□ -0.62
SPC25YER018C HIS1P00498 297 aaKnown RBP11.17□□□□□ -0.62
SPC25YER018C HMG2P12684 1045 aa11.17□□□□□ -0.62
SPC25YER018C PEP5P12868 1029 aa11.17□□□□□ -0.62
SPC25YER018C ADY2P25613 283 aa11.17□□□□□ -0.62
SPC25YER018C YBP1P38315 674 aa11.17□□□□□ -0.62
SPC25YER018C OTU2P38747 307 aaKnown RBP11.17□□□□□ -0.62
SPC25YER018C RTT101P47050 842 aa11.17□□□□□ -0.62
SPC25YER018C YJR079WP47126 109 aa11.17□□□□□ -0.62
SPC25YER018C PSP1P50896 841 aaKnown RBP11.17□□□□□ -0.62
SPC25YER018C COG6P53959 839 aa11.17□□□□□ -0.62
SPC25YER018C VPS9P54787 451 aa11.17□□□□□ -0.62
SPC25YER018C CDC73Q06697 393 aa11.17□□□□□ -0.62
SPC25YER018C YPQ1Q12010 308 aa11.17□□□□□ -0.62
SPC25YER018C LCB4Q12246 624 aa11.17□□□□□ -0.62
SPC25YER018C GPM3Q12326 303 aa11.17□□□□□ -0.62
SPC25YER018C PEX34P25584 144 aa11.16□□□□□ -0.62
SPC25YER018C PSE1P32337 1089 aaKnown RBP11.16□□□□□ -0.62
SPC25YER018C RAD5P32849 1169 aaPredicted RBP11.16□□□□□ -0.62
SPC25YER018C AIM26P32858 118 aa11.16□□□□□ -0.62
SPC25YER018C MUD2P36084 527 aaKnown RBP11.16□□□□□ -0.62
SPC25YER018C ECM13P38195 257 aa11.16□□□□□ -0.62
SPC25YER018C PEX28P38848 579 aa11.16□□□□□ -0.62
SPC25YER018C YEL028WP39989 153 aa11.16□□□□□ -0.62
SPC25YER018C EDC3P39998 551 aaKnown RBP11.16□□□□□ -0.62
SPC25YER018C UFE1P41834 346 aa11.16□□□□□ -0.62
SPC25YER018C PIR3Q03180 325 aa11.16□□□□□ -0.62
SPC25YER018C CBC2Q08920 208 aaKnown RBP RIP-Chip data11.16□□□□□ -0.62not detected
SPC25YER018C AI5_ALPHAQ9ZZX1 630 aa11.16□□□□□ -0.62
SPC25YER018C QCR6P00127 147 aa11.15□□□□□ -0.62
SPC25YER018C MTF1P14908 341 aaKnown RBP11.15□□□□□ -0.62
SPC25YER018C COQ8P27697 501 aa11.15□□□□□ -0.62
SPC25YER018C ECM32P32644 1121 aaKnown RBP11.15□□□□□ -0.62
SPC25YER018C CCT2P39076 527 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms