RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C YTM1Q12024 460 aaPredicted RBP1.46□□□□□ -2.18
SEC3YER008C HSH49Q99181 213 aaPredicted RBP1.46□□□□□ -2.18
SEC3YER008C NUP157P40064 1391 aaKnown RBP1.46□□□□□ -2.18
SEC3YER008C CDC20P26309 610 aa1.46□□□□□ -2.18
SEC3YER008C CCR4P31384 837 aaKnown RBP1.46□□□□□ -2.18
SEC3YER008C VMA8P32610 256 aaKnown RBP1.46□□□□□ -2.18
SEC3YER008C TFC3P34111 1160 aa1.46□□□□□ -2.18
SEC3YER008C YKL133CP36066 463 aa1.46□□□□□ -2.18
SEC3YER008C RXT2P38255 430 aa1.46□□□□□ -2.18
SEC3YER008C YNL195CP40168 261 aa1.46□□□□□ -2.18
SEC3YER008C SDP1P40479 209 aa1.46□□□□□ -2.18
SEC3YER008C IMA5P40884 581 aa1.46□□□□□ -2.18
SEC3YER008C GPD2P41911 440 aaKnown RBP1.46□□□□□ -2.18
SEC3YER008C TAF1P46677 1066 aa1.46□□□□□ -2.18
SEC3YER008C ATP25Q03153 612 aa1.46□□□□□ -2.18
SEC3YER008C SKY1Q03656 742 aa1.46□□□□□ -2.18
SEC3YER008C STP3Q05937 343 aa1.46□□□□□ -2.18
SEC3YER008C CFT1Q06632 1357 aaKnown RBP1.46□□□□□ -2.18
SEC3YER008C PDR11P40550 1411 aa1.46□□□□□ -2.18
SEC3YER008C GEA1P47102 1408 aaPredicted RBP1.46□□□□□ -2.18
SEC3YER008C ERG20P08524 352 aaKnown RBP1.45□□□□□ -2.18
SEC3YER008C SEC12P11655 471 aa1.45□□□□□ -2.18
SEC3YER008C HXT4P32467 576 aa1.45□□□□□ -2.18
SEC3YER008C RKM3P38222 552 aa1.45□□□□□ -2.18
SEC3YER008C RIM4P38741 713 aa1.45□□□□□ -2.18
SEC3YER008C PCL5P38794 229 aa1.45□□□□□ -2.18
SEC3YER008C SCS2P40075 244 aaKnown RBP1.45□□□□□ -2.18
SEC3YER008C GZF3P42944 551 aaKnown RBP1.45□□□□□ -2.18
SEC3YER008C IML2P47031 731 aa1.45□□□□□ -2.18
SEC3YER008C MDE1P47095 244 aa1.45□□□□□ -2.18
SEC3YER008C TIM44Q01852 431 aa1.45□□□□□ -2.18
SEC3YER008C SDH5Q08230 162 aa1.45□□□□□ -2.18
SEC3YER008C TOM1Q03280 3268 aa1.45□□□□□ -2.18
SEC3YER008C CDC31P06704 161 aaKnown RBP1.45□□□□□ -2.18
SEC3YER008C CDC26P14724 124 aa1.45□□□□□ -2.18
SEC3YER008C ORC2P32833 620 aa1.45□□□□□ -2.18
SEC3YER008C CAF16P43569 289 aa1.45□□□□□ -2.18
SEC3YER008C ARE2P53629 642 aaKnown RBP1.45□□□□□ -2.18
SEC3YER008C RTK1Q12100 620 aaPredicted RBP1.45□□□□□ -2.18
SEC3YER008C RRP6Q12149 733 aaKnown RBP1.45□□□□□ -2.18
SEC3YER008C TY1B-AO13527 1196 aaKnown RBP1.45□□□□□ -2.18
SEC3YER008C SUI3P09064 285 aaKnown RBP1.45□□□□□ -2.18
SEC3YER008C MSM1P22438 575 aa1.45□□□□□ -2.18
SEC3YER008C VPH1P32563 840 aaKnown RBP1.45□□□□□ -2.18
SEC3YER008C NUP120P35729 1037 aa1.45□□□□□ -2.18
SEC3YER008C PSY4P38193 441 aa1.45□□□□□ -2.18
SEC3YER008C YBR138CP38277 524 aa1.45□□□□□ -2.18
SEC3YER008C TMA108P40462 946 aa1.45□□□□□ -2.18
SEC3YER008C MNN11P46985 422 aaKnown RBP1.45□□□□□ -2.18
SEC3YER008C MPP10P47083 593 aaKnown RBP1.45□□□□□ -2.18
SEC3YER008C MTC3P53077 123 aa1.45□□□□□ -2.18
SEC3YER008C ESF2P53743 316 aaKnown RBP1.45□□□□□ -2.18
SEC3YER008C TEP1P53916 434 aa1.45□□□□□ -2.18
SEC3YER008C MUS81Q04149 632 aaPredicted RBP1.45□□□□□ -2.18
SEC3YER008C NOP12Q08208 459 aaKnown RBP1.45□□□□□ -2.18
SEC3YER008C YLR149CQ99296 730 aa1.45□□□□□ -2.18
SEC3YER008C YLR415CO13578 112 aa1.44□□□□□ -2.18
SEC3YER008C MSH1P25846 959 aa1.44□□□□□ -2.18
SEC3YER008C APM3P38153 483 aa1.44□□□□□ -2.18
SEC3YER008C SFB3P38810 929 aa1.44□□□□□ -2.18
SEC3YER008C PUG1P40100 303 aa1.44□□□□□ -2.18
SEC3YER008C CCT5P40413 562 aaKnown RBP1.44□□□□□ -2.18
SEC3YER008C VID28P40547 921 aa1.44□□□□□ -2.18
SEC3YER008C HXT16P47185 567 aa1.44□□□□□ -2.18
SEC3YER008C PHO23P50947 330 aa1.44□□□□□ -2.18
SEC3YER008C YPL071CQ02864 156 aa1.44□□□□□ -2.18
SEC3YER008C RCR2Q03446 210 aaKnown RBP1.44□□□□□ -2.18
SEC3YER008C YMR155WQ03795 547 aa1.44□□□□□ -2.18
SEC3YER008C RGC1Q06108 1083 aaKnown RBP1.44□□□□□ -2.18
SEC3YER008C CIR2Q08822 631 aa1.44□□□□□ -2.18
SEC3YER008C AIM41Q12032 185 aa1.44□□□□□ -2.18
SEC3YER008C CLF1Q12309 687 aaPredicted RBP1.44□□□□□ -2.18
SEC3YER008C FIG2P25653 1609 aa1.44□□□□□ -2.18
SEC3YER008C KAR4P25583 335 aa1.44□□□□□ -2.18
SEC3YER008C CDC60P26637 1090 aaKnown RBP1.44□□□□□ -2.18
SEC3YER008C SEC21P32074 935 aaKnown RBP1.44□□□□□ -2.18
SEC3YER008C OAF3P36023 863 aa1.44□□□□□ -2.18
SEC3YER008C BCD1P38772 366 aa1.44□□□□□ -2.18
SEC3YER008C GIP4P39732 760 aa1.44□□□□□ -2.18
SEC3YER008C SAW1P39735 261 aa1.44□□□□□ -2.18
SEC3YER008C MAM1P40065 302 aa1.44□□□□□ -2.18
SEC3YER008C STU2P46675 888 aa1.44□□□□□ -2.18
SEC3YER008C ASK10P48361 1146 aa1.44□□□□□ -2.18
SEC3YER008C LCL3P53153 274 aa1.44□□□□□ -2.18
SEC3YER008C RBG2P53295 368 aaKnown RBP1.44□□□□□ -2.18
SEC3YER008C SPC98P53540 846 aa1.44□□□□□ -2.18
SEC3YER008C MFM1Q02783 413 aa1.44□□□□□ -2.18
SEC3YER008C RPC11Q04307 110 aaPredicted RBP1.44□□□□□ -2.18
SEC3YER008C YMR018WQ04364 514 aa1.44□□□□□ -2.18
SEC3YER008C VBA4Q04602 768 aaKnown RBP1.44□□□□□ -2.18
SEC3YER008C NGL1Q08213 363 aaKnown RBP1.44□□□□□ -2.18
SEC3YER008C HMI1Q12039 706 aa1.44□□□□□ -2.18
SEC3YER008C KCS1Q12494 1050 aa1.44□□□□□ -2.18
SEC3YER008C YOL159C-AQ3E769 90 aa1.44□□□□□ -2.18
SEC3YER008C CTT1P06115 562 aa1.44□□□□□ -2.18
SEC3YER008C TRZ1P36159 838 aaPredicted RBP1.44□□□□□ -2.18
SEC3YER008C YBR259WP38338 688 aa1.44□□□□□ -2.18
SEC3YER008C PSD1P39006 500 aa1.44□□□□□ -2.18
SEC3YER008C PIG2P40187 538 aa1.44□□□□□ -2.18
SEC3YER008C DUG1P43616 481 aaKnown RBP1.44□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms