RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	SAF1	P38352	637 aa		7.54	□□□□□ -1.2
SKP1	YDR328C	PRM9	P39551	298 aa		7.54	□□□□□ -1.2
SKP1	YDR328C	VTC4	P47075	721 aa		7.54	□□□□□ -1.2
SKP1	YDR328C	RFX1	P48743	811 aa		7.54	□□□□□ -1.2
SKP1	YDR328C	BET4	Q00618	327 aa		7.54	□□□□□ -1.2
SKP1	YDR328C	MTD1	Q02046	320 aa	Known RBP	7.54	□□□□□ -1.2
SKP1	YDR328C	SPG3	Q04398	127 aa	Predicted RBP	7.54	□□□□□ -1.2
SKP1	YDR328C	PMT7	Q06644	662 aa		7.54	□□□□□ -1.2
SKP1	YDR328C	ACM1	Q08981	209 aa		7.54	□□□□□ -1.2
SKP1	YDR328C	SPE3	Q12074	293 aa	Known RBP	7.54	□□□□□ -1.2
SKP1	YDR328C	ARP7	Q12406	477 aa		7.54	□□□□□ -1.2
SKP1	YDR328C	AVL9	Q12500	764 aa		7.54	□□□□□ -1.2
SKP1	YDR328C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	7.53	□□□□□ -1.2	RIP-Chip
SKP1	YDR328C	GCR1	P07261	785 aa		7.53	□□□□□ -1.2
SKP1	YDR328C	SPE1	P08432	466 aa		7.53	□□□□□ -1.2
SKP1	YDR328C	GPI10	P30777	616 aa		7.53	□□□□□ -1.2
SKP1	YDR328C	DAL1	P32375	460 aa		7.53	□□□□□ -1.2
SKP1	YDR328C	POP4	P38336	279 aa		7.53	□□□□□ -1.2
SKP1	YDR328C	FSH1	P38777	243 aa	Known RBP	7.53	□□□□□ -1.2
SKP1	YDR328C	AIM18	P38884	321 aa		7.53	□□□□□ -1.2
SKP1	YDR328C	RGD2	P43556	714 aa		7.53	□□□□□ -1.2
SKP1	YDR328C	RRT5	P43607	289 aa		7.53	□□□□□ -1.2
SKP1	YDR328C	YJR039W	P47107	1121 aa		7.53	□□□□□ -1.2
SKP1	YDR328C	GCN5	Q03330	439 aa		7.53	□□□□□ -1.2
SKP1	YDR328C	AAD4	Q07747	329 aa		7.53	□□□□□ -1.2
SKP1	YDR328C	TPO1	Q07824	586 aa		7.53	□□□□□ -1.2
SKP1	YDR328C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	7.53	□□□□□ -1.2	not detected
SKP1	YDR328C	GPM3	Q12326	303 aa		7.53	□□□□□ -1.2
SKP1	YDR328C	YKL068W-A	Q3E826	78 aa		7.53	□□□□□ -1.2
SKP1	YDR328C	CDC24	P11433	854 aa	Predicted RBP	7.52	□□□□□ -1.21
SKP1	YDR328C	CBF1	P17106	351 aa		7.52	□□□□□ -1.21
SKP1	YDR328C	YIH1	P25637	258 aa		7.52	□□□□□ -1.21
SKP1	YDR328C	RAD16	P31244	790 aa		7.52	□□□□□ -1.21
SKP1	YDR328C	DUG2	P38149	878 aa		7.52	□□□□□ -1.21
SKP1	YDR328C	DIA4	P38705	446 aa	Predicted RBP	7.52	□□□□□ -1.21
SKP1	YDR328C	BTT1	P40314	149 aa	Predicted RBP	7.52	□□□□□ -1.21
SKP1	YDR328C	INA22	P40576	216 aa		7.52	□□□□□ -1.21
SKP1	YDR328C	RSM26	P47141	266 aa		7.52	□□□□□ -1.21
SKP1	YDR328C	YNL144C	P53907	740 aa		7.52	□□□□□ -1.21
SKP1	YDR328C	ARA2	Q04212	335 aa		7.52	□□□□□ -1.21
SKP1	YDR328C	NDJ1	Q12366	352 aa		7.52	□□□□□ -1.21
SKP1	YDR328C	RRD2	Q12461	358 aa		7.52	□□□□□ -1.21
SKP1	YDR328C	HEM15	P16622	393 aa		7.51	□□□□□ -1.21
SKP1	YDR328C	SPO16	P17122	198 aa		7.51	□□□□□ -1.21
SKP1	YDR328C	PEX1	P24004	1043 aa		7.51	□□□□□ -1.21
SKP1	YDR328C	SYN8	P31377	255 aa		7.51	□□□□□ -1.21
SKP1	YDR328C	ISF1	P32488	338 aa		7.51	□□□□□ -1.21
SKP1	YDR328C	ECM13	P38195	257 aa		7.51	□□□□□ -1.21
SKP1	YDR328C	LAM1	P38851	1228 aa		7.51	□□□□□ -1.21
SKP1	YDR328C	MND2	P40577	368 aa		7.51	□□□□□ -1.21
SKP1	YDR328C	MVP1	P40959	511 aa	Known RBP	7.51	□□□□□ -1.21
SKP1	YDR328C	ATG36	P46983	293 aa		7.51	□□□□□ -1.21
SKP1	YDR328C	MRX6	P48564	524 aa		7.51	□□□□□ -1.21
SKP1	YDR328C	INA17	Q02888	182 aa		7.51	□□□□□ -1.21
SKP1	YDR328C	GRX8	Q05926	109 aa		7.51	□□□□□ -1.21
SKP1	YDR328C	YLR257W	Q06146	321 aa	Known RBP	7.51	□□□□□ -1.21
SKP1	YDR328C	CDC73	Q06697	393 aa		7.51	□□□□□ -1.21
SKP1	YDR328C	YLL056C	Q12177	298 aa		7.51	□□□□□ -1.21
SKP1	YDR328C	ADH4	P10127	382 aa		7.5	□□□□□ -1.21
SKP1	YDR328C	PYC1	P11154	1178 aa	Known RBP	7.5	□□□□□ -1.21
SKP1	YDR328C	MTF1	P14908	341 aa	Known RBP	7.5	□□□□□ -1.21
SKP1	YDR328C	MET16	P18408	261 aa	Predicted RBP	7.5	□□□□□ -1.21
SKP1	YDR328C	PDE1	P22434	369 aa		7.5	□□□□□ -1.21
SKP1	YDR328C	MGT1	P26188	188 aa		7.5	□□□□□ -1.21
SKP1	YDR328C	TPS2	P31688	896 aa	Known RBP	7.5	□□□□□ -1.21
SKP1	YDR328C	ECM32	P32644	1121 aa	Known RBP	7.5	□□□□□ -1.21
SKP1	YDR328C	YME1	P32795	747 aa		7.5	□□□□□ -1.21
SKP1	YDR328C	AIM26	P32858	118 aa		7.5	□□□□□ -1.21
SKP1	YDR328C	BIT2	P38346	545 aa		7.5	□□□□□ -1.21
SKP1	YDR328C	MSR1	P38714	643 aa		7.5	□□□□□ -1.21
SKP1	YDR328C	SFB3	P38810	929 aa		7.5	□□□□□ -1.21
SKP1	YDR328C	CKB2	P38930	258 aa		7.5	□□□□□ -1.21
SKP1	YDR328C	NUP60	P39705	539 aa		7.5	□□□□□ -1.21
SKP1	YDR328C	EDC3	P39998	551 aa	Known RBP	7.5	□□□□□ -1.21
SKP1	YDR328C	SNG1	P46950	547 aa		7.5	□□□□□ -1.21
SKP1	YDR328C	MNN11	P46985	422 aa	Known RBP	7.5	□□□□□ -1.21
SKP1	YDR328C	RTT101	P47050	842 aa		7.5	□□□□□ -1.21
SKP1	YDR328C	UTP8	P53276	713 aa	Known RBP	7.5	□□□□□ -1.21
SKP1	YDR328C	NMA111	P53920	997 aa		7.5	□□□□□ -1.21
SKP1	YDR328C	VPS9	P54787	451 aa		7.5	□□□□□ -1.21
SKP1	YDR328C	PIR3	Q03180	325 aa		7.5	□□□□□ -1.21
SKP1	YDR328C	STE23	Q06010	1027 aa		7.5	□□□□□ -1.21
SKP1	YDR328C	BSP1	Q06604	576 aa		7.5	□□□□□ -1.21
SKP1	YDR328C	YPQ1	Q12010	308 aa		7.5	□□□□□ -1.21
SKP1	YDR328C	SVS1	Q12254	260 aa		7.5	□□□□□ -1.21
SKP1	YDR328C	ENO2	P00925	437 aa	Known RBP	7.49	□□□□□ -1.21
SKP1	YDR328C	IMA3	P0CW40	589 aa		7.49	□□□□□ -1.21
SKP1	YDR328C	IMA4	P0CW41	589 aa		7.49	□□□□□ -1.21
SKP1	YDR328C	RAD5	P32849	1169 aa	Predicted RBP	7.49	□□□□□ -1.21
SKP1	YDR328C	FUI1	P38196	639 aa		7.49	□□□□□ -1.21
SKP1	YDR328C	PPE1	P38796	400 aa		7.49	□□□□□ -1.21
SKP1	YDR328C	STL1	P39932	569 aa		7.49	□□□□□ -1.21
SKP1	YDR328C	SMX2	P40204	77 aa	Known RBP	7.49	□□□□□ -1.21
SKP1	YDR328C	SAE2	P46946	345 aa		7.49	□□□□□ -1.21
SKP1	YDR328C	TCB2	P48231	1178 aa		7.49	□□□□□ -1.21
SKP1	YDR328C	PSP1	P50896	841 aa	Known RBP	7.49	□□□□□ -1.21
SKP1	YDR328C	YGR127W	P53275	312 aa		7.49	□□□□□ -1.21
SKP1	YDR328C	YPR003C	P53394	754 aa		7.49	□□□□□ -1.21
SKP1	YDR328C	PNP1	Q05788	311 aa		7.49	□□□□□ -1.21
SKP1	YDR328C	ECM38	Q05902	660 aa	Predicted RBP	7.49	□□□□□ -1.21

Retrieved 100 of 5,963 RNA–protein pairs in 84.8 ms