RNA–Protein interactions for RNA: YDR323C

PEP7, Transcript of Adaptor protein involved in vesicle-mediated vacuolar protein sorting, yeast

Gene PEP7, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEP7	YDR323C	XYL2	Q07993	356 aa		4.06	□□□□□ -1.76
PEP7	YDR323C	PAR32	Q12515	295 aa	Known RBP	4.06	□□□□□ -1.76
PEP7	YDR323C	SEC3	P33332	1336 aa	Known RBP	4.06	□□□□□ -1.76
PEP7	YDR323C	RAD18	P10862	487 aa		4.05	□□□□□ -1.76
PEP7	YDR323C	GRR1	P24814	1151 aa		4.05	□□□□□ -1.76
PEP7	YDR323C	KRE6	P32486	720 aa		4.05	□□□□□ -1.76
PEP7	YDR323C	YEL1	P34225	687 aa		4.05	□□□□□ -1.76
PEP7	YDR323C	YKT6	P36015	200 aa	Known RBP	4.05	□□□□□ -1.76
PEP7	YDR323C	SLX1	P38324	304 aa		4.05	□□□□□ -1.76
PEP7	YDR323C	EFM2	P38347	419 aa		4.05	□□□□□ -1.76
PEP7	YDR323C	STL1	P39932	569 aa		4.05	□□□□□ -1.76
PEP7	YDR323C	GDI1	P39958	451 aa	Known RBP	4.05	□□□□□ -1.76
PEP7	YDR323C	KAP123	P40069	1113 aa	Known RBP	4.05	□□□□□ -1.76
PEP7	YDR323C	YIL161W	P40449	235 aa	Known RBP	4.05	□□□□□ -1.76
PEP7	YDR323C	MKT1	P40850	830 aa	Known RBP	4.05	□□□□□ -1.76
PEP7	YDR323C	QRI7	P43122	407 aa		4.05	□□□□□ -1.76
PEP7	YDR323C	NOG2	P53742	486 aa	Known RBP	4.05	□□□□□ -1.76
PEP7	YDR323C	NOT3	P06102	836 aa	Known RBP	4.05	□□□□□ -1.76
PEP7	YDR323C	DPH5	P32469	300 aa	Predicted RBP	4.05	□□□□□ -1.76
PEP7	YDR323C	PRP19	P32523	503 aa	Known RBP	4.05	□□□□□ -1.76
PEP7	YDR323C	RTS1	P38903	757 aa		4.05	□□□□□ -1.76
PEP7	YDR323C	YEL068C	P39977	110 aa		4.05	□□□□□ -1.76
PEP7	YDR323C	YJL068C	P40363	299 aa		4.05	□□□□□ -1.76
PEP7	YDR323C	CIR1	P42940	261 aa		4.05	□□□□□ -1.76
PEP7	YDR323C	CAF16	P43569	289 aa		4.05	□□□□□ -1.76
PEP7	YDR323C	NIT2	P47016	307 aa		4.05	□□□□□ -1.76
PEP7	YDR323C	SHE4	P51534	789 aa		4.05	□□□□□ -1.76
PEP7	YDR323C	ZIP2	P53061	704 aa		4.05	□□□□□ -1.76
PEP7	YDR323C	MSC2	Q03455	724 aa		4.05	□□□□□ -1.76
PEP7	YDR323C	YMR155W	Q03795	547 aa		4.05	□□□□□ -1.76
PEP7	YDR323C	UTP21	Q06078	939 aa	Predicted RBP	4.05	□□□□□ -1.76
PEP7	YDR323C	ARR2	Q06597	130 aa		4.05	□□□□□ -1.76
PEP7	YDR323C	TSR1	Q07381	788 aa	Known RBP	4.05	□□□□□ -1.76
PEP7	YDR323C	NOP6	Q07623	225 aa	Known RBP	4.05	□□□□□ -1.76
PEP7	YDR323C	YOR389W	Q08912	624 aa		4.05	□□□□□ -1.76
PEP7	YDR323C	IKI3	Q06706	1349 aa	Known RBP	4.04	□□□□□ -1.76
PEP7	YDR323C	RPS9A	O13516	197 aa	Known RBP	4.04	□□□□□ -1.76
PEP7	YDR323C	YLR358C	O13565	187 aa		4.04	□□□□□ -1.76
PEP7	YDR323C	LAT1	P12695	482 aa	Known RBP	4.04	□□□□□ -1.76
PEP7	YDR323C	SEC18	P18759	758 aa	Known RBP	4.04	□□□□□ -1.76
PEP7	YDR323C	VPS3	P23643	1011 aa		4.04	□□□□□ -1.76
PEP7	YDR323C	PER1	P25625	357 aa		4.04	□□□□□ -1.76
PEP7	YDR323C	MSH1	P25846	959 aa		4.04	□□□□□ -1.76
PEP7	YDR323C	YKU70	P32807	602 aa		4.04	□□□□□ -1.76
PEP7	YDR323C	BUD16	P39988	312 aa		4.04	□□□□□ -1.76
PEP7	YDR323C	FTR1	P40088	404 aa		4.04	□□□□□ -1.76
PEP7	YDR323C	UBP7	P40453	1071 aa		4.04	□□□□□ -1.76
PEP7	YDR323C	CEP3	P40969	608 aa		4.04	□□□□□ -1.76
PEP7	YDR323C	MDR1	P53258	950 aa		4.04	□□□□□ -1.76
PEP7	YDR323C	CIK1	Q01649	594 aa		4.04	□□□□□ -1.76
PEP7	YDR323C	RRN11	Q04712	507 aa		4.04	□□□□□ -1.76
PEP7	YDR323C	KEL3	Q08979	651 aa	Predicted RBP	4.04	□□□□□ -1.76
PEP7	YDR323C	YTM1	Q12024	460 aa	Predicted RBP	4.04	□□□□□ -1.76
PEP7	YDR323C	LSP1	Q12230	341 aa	Known RBP	4.04	□□□□□ -1.76
PEP7	YDR323C	MDY2	Q12285	212 aa		4.04	□□□□□ -1.76
PEP7	YDR323C	TAF3	Q12297	353 aa		4.04	□□□□□ -1.76
PEP7	YDR323C	FRE6	Q12473	712 aa		4.04	□□□□□ -1.76
PEP7	YDR323C	RMP1	Q12530	201 aa		4.04	□□□□□ -1.76
PEP7	YDR323C	SOD2	P00447	233 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	HSF1	P10961	833 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	ENA1	P13587	1091 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	POL3	P15436	1097 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	THR4	P16120	514 aa	Known RBP	4.03	□□□□□ -1.76
PEP7	YDR323C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
PEP7	YDR323C	THR1	P17423	357 aa	Known RBP	4.03	□□□□□ -1.76
PEP7	YDR323C	STE11	P23561	717 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	GPI10	P30777	616 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	HSP104	P31539	908 aa	Known RBP	4.03	□□□□□ -1.76
PEP7	YDR323C	ACP1	P32463	125 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	SRP101	P32916	621 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	YUH1	P35127	236 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	SWH1	P35845	1188 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	RMA1	P36001	430 aa	Known RBP	4.03	□□□□□ -1.76
PEP7	YDR323C	MCD4	P36051	919 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	UIP5	P36137	443 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	LAS1	P36146	502 aa	Predicted RBP	4.03	□□□□□ -1.76
PEP7	YDR323C	ECM4	P36156	370 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	MTG2	P38860	518 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	RPN10	P38886	268 aa	Known RBP	4.03	□□□□□ -1.76
PEP7	YDR323C	LSM5	P40089	93 aa	Known RBP	4.03	□□□□□ -1.76
PEP7	YDR323C	LCB2	P40970	561 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	ENP2	P48234	707 aa	Known RBP	4.03	□□□□□ -1.76
PEP7	YDR323C	RAI1	P53063	387 aa	Known RBP	4.03	□□□□□ -1.76
PEP7	YDR323C	TAD1	P53065	400 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	YGR266W	P53326	701 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	SNO2	P53823	222 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	RTC4	P53850	401 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	YNL144C	P53907	740 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	ARP5	P53946	755 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	DAK1	P54838	584 aa	Known RBP	4.03	□□□□□ -1.76
PEP7	YDR323C	ENA2	Q01896	1091 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	YPL071C	Q02864	156 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	FCP1	Q03254	732 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	RMT2	Q03305	412 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	SIZ1	Q04195	904 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	RPN7	Q06103	429 aa	Known RBP	4.03	□□□□□ -1.76
PEP7	YDR323C	HIM1	Q06674	414 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	RIB2	Q12362	591 aa	Known RBP	4.03	□□□□□ -1.76
PEP7	YDR323C	SFI1	Q12369	946 aa		4.03	□□□□□ -1.76
PEP7	YDR323C	ENA5	Q12691	1091 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms