RNA–Protein interactions for RNA: YDR320C

SWA2, Transcript of Auxilin-like protein involved in vesicular transport, yeast

Gene SWA2, Length 2,007 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWA2	YDR320C	AFR1	P33304	620 aa		2.61	□□□□□ -1.99
SWA2	YDR320C	MDL1	P33310	695 aa		2.61	□□□□□ -1.99
SWA2	YDR320C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	not detected
SWA2	YDR320C	MCD4	P36051	919 aa		2.61	□□□□□ -1.99
SWA2	YDR320C	CUE2	P36075	443 aa	Known RBP	2.61	□□□□□ -1.99
SWA2	YDR320C	DID4	P36108	232 aa		2.61	□□□□□ -1.99
SWA2	YDR320C	MCM7	P38132	845 aa		2.61	□□□□□ -1.99
SWA2	YDR320C	YBL028C	P38202	106 aa		2.61	□□□□□ -1.99
SWA2	YDR320C	FTH1	P38310	465 aa		2.61	□□□□□ -1.99
SWA2	YDR320C	GND1	P38720	489 aa	Known RBP	2.61	□□□□□ -1.99
SWA2	YDR320C	YER034W	P40022	185 aa	Known RBP	2.61	□□□□□ -1.99
SWA2	YDR320C	YIL161W	P40449	235 aa	Known RBP	2.61	□□□□□ -1.99
SWA2	YDR320C	CIR1	P42940	261 aa		2.61	□□□□□ -1.99
SWA2	YDR320C	ALG2	P43636	503 aa		2.61	□□□□□ -1.99
SWA2	YDR320C	NOP9	P47077	666 aa	Known RBP	2.61	□□□□□ -1.99
SWA2	YDR320C	YJR039W	P47107	1121 aa		2.61	□□□□□ -1.99
SWA2	YDR320C	BUL1	P48524	976 aa		2.61	□□□□□ -1.99
SWA2	YDR320C	AIM14	P53109	570 aa		2.61	□□□□□ -1.99
SWA2	YDR320C	MNP1	P53163	194 aa	Predicted RBP	2.61	□□□□□ -1.99
SWA2	YDR320C	VPS9	P54787	451 aa		2.61	□□□□□ -1.99
SWA2	YDR320C	SEC5	P89102	971 aa		2.61	□□□□□ -1.99
SWA2	YDR320C	SKY1	Q03656	742 aa		2.61	□□□□□ -1.99
SWA2	YDR320C	MFB1	Q04922	465 aa		2.61	□□□□□ -1.99
SWA2	YDR320C	VID22	Q05934	901 aa		2.61	□□□□□ -1.99
SWA2	YDR320C	GUD1	Q07729	489 aa		2.61	□□□□□ -1.99
SWA2	YDR320C	MLH2	Q07980	695 aa		2.61	□□□□□ -1.99
SWA2	YDR320C	HAL9	Q12180	1030 aa		2.61	□□□□□ -1.99
SWA2	YDR320C	SKS1	Q12505	502 aa		2.61	□□□□□ -1.99
SWA2	YDR320C	MET17	P06106	444 aa		2.6	□□□□□ -1.99
SWA2	YDR320C	SES1	P07284	462 aa	Known RBP	2.6	□□□□□ -1.99
SWA2	YDR320C	OM45	P16547	393 aa		2.6	□□□□□ -1.99
SWA2	YDR320C	KAR3	P17119	729 aa		2.6	□□□□□ -1.99
SWA2	YDR320C	MNE1	P24720	663 aa		2.6	□□□□□ -1.99
SWA2	YDR320C	YCL049C	P25577	312 aa		2.6	□□□□□ -1.99
SWA2	YDR320C	COY1	P34237	679 aa		2.6	□□□□□ -1.99
SWA2	YDR320C	PCH2	P38126	564 aa		2.6	□□□□□ -1.99
SWA2	YDR320C	OTU2	P38747	307 aa	Known RBP	2.6	□□□□□ -1.99
SWA2	YDR320C	YER010C	P40011	234 aa		2.6	□□□□□ -1.99
SWA2	YDR320C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	2.6	□□□□□ -1.99	not detected
SWA2	YDR320C	AIP1	P46680	615 aa	Known RBP	2.6	□□□□□ -1.99
SWA2	YDR320C	YGL176C	P46945	554 aa		2.6	□□□□□ -1.99
SWA2	YDR320C	CCM1	P48237	864 aa	Predicted RBP	2.6	□□□□□ -1.99
SWA2	YDR320C	RPN14	P53196	417 aa		2.6	□□□□□ -1.99
SWA2	YDR320C	YNR068C	P53754	272 aa		2.6	□□□□□ -1.99
SWA2	YDR320C	REX2	P54964	269 aa	Known RBP	2.6	□□□□□ -1.99
SWA2	YDR320C	ROD1	Q02805	837 aa		2.6	□□□□□ -1.99
SWA2	YDR320C	YPL107W	Q02873	248 aa		2.6	□□□□□ -1.99
SWA2	YDR320C	PEX25	Q02969	394 aa		2.6	□□□□□ -1.99
SWA2	YDR320C	CWC21	Q03375	135 aa	Known RBP	2.6	□□□□□ -1.99
SWA2	YDR320C	DPB4	Q04603	196 aa	Known RBP	2.6	□□□□□ -1.99
SWA2	YDR320C	YDL073W	Q07454	984 aa		2.6	□□□□□ -1.99
SWA2	YDR320C	HFI1	Q12060	488 aa		2.6	□□□□□ -1.99
SWA2	YDR320C	KCS1	Q12494	1050 aa		2.6	□□□□□ -1.99
SWA2	YDR320C	PAR32	Q12515	295 aa	Known RBP	2.6	□□□□□ -1.99
SWA2	YDR320C	APM4	Q99186	491 aa		2.6	□□□□□ -1.99
SWA2	YDR320C	THO2	P53552	1597 aa	Known RBP	2.6	□□□□□ -1.99
SWA2	YDR320C	BUD4	P47136	1447 aa		2.6	□□□□□ -1.99
SWA2	YDR320C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	not detected
SWA2	YDR320C	MIS1	P09440	975 aa	Known RBP	2.59	□□□□□ -1.99
SWA2	YDR320C	APE1	P14904	514 aa		2.59	□□□□□ -1.99
SWA2	YDR320C	SUI2	P20459	304 aa	Known RBP	2.59	□□□□□ -1.99
SWA2	YDR320C	LCB1	P25045	558 aa	Known RBP	2.59	□□□□□ -1.99
SWA2	YDR320C	MSH1	P25846	959 aa		2.59	□□□□□ -1.99
SWA2	YDR320C	CCR4	P31384	837 aa	Known RBP	2.59	□□□□□ -1.99
SWA2	YDR320C	DBF4	P32325	704 aa		2.59	□□□□□ -1.99
SWA2	YDR320C	SWH1	P35845	1188 aa		2.59	□□□□□ -1.99
SWA2	YDR320C	BUD16	P39988	312 aa		2.59	□□□□□ -1.99
SWA2	YDR320C	AIM20	P40451	204 aa		2.59	□□□□□ -1.99
SWA2	YDR320C	SEC28	P40509	296 aa	Known RBP	2.59	□□□□□ -1.99
SWA2	YDR320C	GYP8	P43570	497 aa		2.59	□□□□□ -1.99
SWA2	YDR320C	STU2	P46675	888 aa		2.59	□□□□□ -1.99
SWA2	YDR320C	NUP84	P52891	726 aa		2.59	□□□□□ -1.99
SWA2	YDR320C	YGR266W	P53326	701 aa		2.59	□□□□□ -1.99
SWA2	YDR320C	COG8	Q04632	607 aa		2.59	□□□□□ -1.99
SWA2	YDR320C	GAD1	Q04792	585 aa		2.59	□□□□□ -1.99
SWA2	YDR320C	OMS1	Q06668	471 aa		2.59	□□□□□ -1.99
SWA2	YDR320C	YPR071W	Q12346	211 aa		2.59	□□□□□ -1.99
SWA2	YDR320C	LAS17	Q12446	633 aa		2.59	□□□□□ -1.99
SWA2	YDR320C	FRE6	Q12473	712 aa		2.59	□□□□□ -1.99
SWA2	YDR320C	DED1	P06634	604 aa	Known RBP	2.59	□□□□□ -2
SWA2	YDR320C	UBC1	P21734	215 aa	Known RBP	2.59	□□□□□ -2
SWA2	YDR320C	STE50	P25344	346 aa		2.59	□□□□□ -2
SWA2	YDR320C	NPP1	P25353	742 aa		2.59	□□□□□ -2
SWA2	YDR320C	RRP43	P25359	394 aa	Predicted RBP	2.59	□□□□□ -2
SWA2	YDR320C	SGF29	P25554	259 aa		2.59	□□□□□ -2
SWA2	YDR320C	RPL5	P26321	297 aa	Known RBP	2.59	□□□□□ -2
SWA2	YDR320C	ADK2	P26364	225 aa		2.59	□□□□□ -2
SWA2	YDR320C	GPI10	P30777	616 aa		2.59	□□□□□ -2
SWA2	YDR320C	HOG1	P32485	435 aa		2.59	□□□□□ -2
SWA2	YDR320C	NIP1	P32497	812 aa	Known RBP	2.59	□□□□□ -2
SWA2	YDR320C	TEF4	P36008	412 aa	Known RBP	2.59	□□□□□ -2
SWA2	YDR320C	POA1	P38218	177 aa		2.59	□□□□□ -2
SWA2	YDR320C	FAT1	P38225	669 aa		2.59	□□□□□ -2
SWA2	YDR320C	SIF2	P38262	535 aa		2.59	□□□□□ -2
SWA2	YDR320C	IFA38	P38286	347 aa		2.59	□□□□□ -2
SWA2	YDR320C	RTS1	P38903	757 aa		2.59	□□□□□ -2
SWA2	YDR320C	PUG1	P40100	303 aa		2.59	□□□□□ -2
SWA2	YDR320C	SMK1	P41808	388 aa		2.59	□□□□□ -2
SWA2	YDR320C	FET5	P43561	622 aa		2.59	□□□□□ -2
SWA2	YDR320C	ZIP2	P53061	704 aa		2.59	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms