RNA–Protein interactions for RNA: YDR059C

UBC5, Transcript of Ubiquitin-conjugating enzyme, yeast

Gene UBC5, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC5	YDR059C	GSY2	P27472	705 aa		4.79	□□□□□ -1.64
UBC5	YDR059C	MTC7	P32633	139 aa		4.79	□□□□□ -1.64
UBC5	YDR059C	EXO1	P39875	702 aa		4.79	□□□□□ -1.64
UBC5	YDR059C	BST1	P43571	1029 aa		4.79	□□□□□ -1.64
UBC5	YDR059C	YFL015C	P43578	164 aa		4.79	□□□□□ -1.64
UBC5	YDR059C	SAP4	P53036	818 aa		4.79	□□□□□ -1.64
UBC5	YDR059C	USA1	Q03714	838 aa		4.79	□□□□□ -1.64
UBC5	YDR059C	ARR3	Q06598	404 aa		4.79	□□□□□ -1.64
UBC5	YDR059C	HFI1	Q12060	488 aa		4.79	□□□□□ -1.64
UBC5	YDR059C	MF(ALPHA)2	P32435	120 aa		4.78	□□□□□ -1.64
UBC5	YDR059C	EUG1	P32474	517 aa		4.78	□□□□□ -1.64
UBC5	YDR059C	BRN1	P38170	754 aa		4.78	□□□□□ -1.64
UBC5	YDR059C	LRO1	P40345	661 aa		4.78	□□□□□ -1.64
UBC5	YDR059C	GZF3	P42944	551 aa	Known RBP	4.78	□□□□□ -1.64
UBC5	YDR059C	YCG1	Q06680	1035 aa		4.78	□□□□□ -1.64
UBC5	YDR059C	PRS5	Q12265	496 aa	Known RBP	4.78	□□□□□ -1.64
UBC5	YDR059C	SEC3	P33332	1336 aa	Known RBP	4.77	□□□□□ -1.65
UBC5	YDR059C	RNR3	P21672	869 aa	Known RBP	4.77	□□□□□ -1.65
UBC5	YDR059C	CCL1	P37366	393 aa		4.77	□□□□□ -1.65
UBC5	YDR059C	EHT1	P38295	451 aa		4.77	□□□□□ -1.65
UBC5	YDR059C	OPT1	P40897	799 aa		4.77	□□□□□ -1.65
UBC5	YDR059C	IRC8	P47046	822 aa		4.77	□□□□□ -1.65
UBC5	YDR059C	ENP2	P48234	707 aa	Known RBP	4.77	□□□□□ -1.65
UBC5	YDR059C	RSC9	Q03124	581 aa		4.77	□□□□□ -1.65
UBC5	YDR059C	YHM2	Q04013	314 aa		4.77	□□□□□ -1.65
UBC5	YDR059C	BSP1	Q06604	576 aa		4.77	□□□□□ -1.65
UBC5	YDR059C	CDC26	P14724	124 aa		4.76	□□□□□ -1.65
UBC5	YDR059C	PPG1	P32838	368 aa		4.76	□□□□□ -1.65
UBC5	YDR059C	TYS1	P36421	394 aa	Known RBP	4.76	□□□□□ -1.65
UBC5	YDR059C	YPT10	P38146	199 aa		4.76	□□□□□ -1.65
UBC5	YDR059C	YHR033W	P38690	423 aa		4.76	□□□□□ -1.65
UBC5	YDR059C	MNN1	P39106	762 aa		4.76	□□□□□ -1.65
UBC5	YDR059C	VID28	P40547	921 aa		4.76	□□□□□ -1.65
UBC5	YDR059C	TDA10	P42938	290 aa		4.76	□□□□□ -1.65
UBC5	YDR059C	YDL183C	P48569	320 aa		4.76	□□□□□ -1.65
UBC5	YDR059C	RNH70	P53331	553 aa		4.76	□□□□□ -1.65
UBC5	YDR059C	MTQ2	Q03920	221 aa	Predicted RBP	4.76	□□□□□ -1.65
UBC5	YDR059C	TUF1	P02992	437 aa	Known RBP	4.75	□□□□□ -1.65
UBC5	YDR059C	HMG2	P12684	1045 aa		4.75	□□□□□ -1.65
UBC5	YDR059C	FAT1	P38225	669 aa		4.75	□□□□□ -1.65
UBC5	YDR059C	SPC97	P38863	823 aa		4.75	□□□□□ -1.65
UBC5	YDR059C	MNT3	P40549	630 aa		4.75	□□□□□ -1.65
UBC5	YDR059C	HLJ1	P48353	224 aa		4.75	□□□□□ -1.65
UBC5	YDR059C	IDP3	P53982	420 aa	Known RBP	4.75	□□□□□ -1.65
UBC5	YDR059C	DNM1	P54861	757 aa		4.75	□□□□□ -1.65
UBC5	YDR059C	PTA1	Q01329	785 aa	Predicted RBP	4.75	□□□□□ -1.65
UBC5	YDR059C	THI73	Q07904	523 aa		4.75	□□□□□ -1.65
UBC5	YDR059C	RDL1	Q12305	139 aa	Known RBP	4.75	□□□□□ -1.65
UBC5	YDR059C	ADR1	P07248	1323 aa		4.74	□□□□□ -1.65
UBC5	YDR059C	MNN11	P46985	422 aa	Known RBP	4.74	□□□□□ -1.65
UBC5	YDR059C	WAR1	Q03631	944 aa		4.74	□□□□□ -1.65
UBC5	YDR059C	UTP14	Q04500	899 aa	Known RBP	4.74	□□□□□ -1.65
UBC5	YDR059C	SPN1	Q06505	410 aa	Predicted RBP	4.74	□□□□□ -1.65
UBC5	YDR059C	YTM1	Q12024	460 aa	Predicted RBP	4.74	□□□□□ -1.65
UBC5	YDR059C	YLR111W	Q12528	110 aa		4.74	□□□□□ -1.65
UBC5	YDR059C	URE2	P23202	354 aa	Known RBP	4.73	□□□□□ -1.65
UBC5	YDR059C	DID4	P36108	232 aa		4.73	□□□□□ -1.65
UBC5	YDR059C	YJL193W	P39542	402 aa		4.73	□□□□□ -1.65
UBC5	YDR059C	OAF1	P39720	1047 aa	Predicted RBP	4.73	□□□□□ -1.65
UBC5	YDR059C	PCI8	P40512	444 aa		4.73	□□□□□ -1.65
UBC5	YDR059C	MEP2	P41948	499 aa		4.73	□□□□□ -1.65
UBC5	YDR059C	RPS21A	P0C0V8	87 aa	Known RBP	4.72	□□□□□ -1.65
UBC5	YDR059C	VPS33	P20795	691 aa		4.72	□□□□□ -1.65
UBC5	YDR059C	ASK1	P35734	292 aa		4.72	□□□□□ -1.65
UBC5	YDR059C	JHD1	P40034	492 aa		4.72	□□□□□ -1.65
UBC5	YDR059C	SCW4	P53334	386 aa	Known RBP	4.72	□□□□□ -1.65
UBC5	YDR059C	PCL8	Q08966	492 aa		4.72	□□□□□ -1.65
UBC5	YDR059C	AAC1	P04710	309 aa		4.71	□□□□□ -1.66
UBC5	YDR059C	CRC1	Q12289	327 aa		4.71	□□□□□ -1.66
UBC5	YDR059C	SAE2	P46946	345 aa		4.7	□□□□□ -1.66
UBC5	YDR059C	YJU2	P28320	278 aa	Predicted RBP	4.69	□□□□□ -1.66
UBC5	YDR059C	DGR2	P32330	852 aa		4.69	□□□□□ -1.66
UBC5	YDR059C	PMT3	P47190	753 aa		4.69	□□□□□ -1.66
UBC5	YDR059C	UME1	Q03010	460 aa		4.69	□□□□□ -1.66
UBC5	YDR059C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
UBC5	YDR059C	YAP1	P19880	650 aa	Known RBP	4.68	□□□□□ -1.66
UBC5	YDR059C	RMA1	P36001	430 aa	Known RBP	4.68	□□□□□ -1.66
UBC5	YDR059C	HXT4	P32467	576 aa		4.67	□□□□□ -1.66
UBC5	YDR059C	RGT1	P32862	1170 aa		4.67	□□□□□ -1.66
UBC5	YDR059C	YIL092W	P40497	633 aa		4.67	□□□□□ -1.66
UBC5	YDR059C	PEF1	P53238	335 aa		4.67	□□□□□ -1.66
UBC5	YDR059C	SQS1	P53866	767 aa	Known RBP	4.67	□□□□□ -1.66
UBC5	YDR059C	HRD3	Q05787	833 aa		4.67	□□□□□ -1.66
UBC5	YDR059C	TPO3	Q06451	622 aa		4.67	□□□□□ -1.66
UBC5	YDR059C	NUP145	P49687	1317 aa		4.67	□□□□□ -1.66
UBC5	YDR059C	DSS4	P32601	143 aa		4.66	□□□□□ -1.66
UBC5	YDR059C	PXL1	P36166	706 aa		4.66	□□□□□ -1.66
UBC5	YDR059C	GPG1	P53130	126 aa		4.66	□□□□□ -1.66
UBC5	YDR059C	AHA1	Q12449	350 aa	Known RBP	4.66	□□□□□ -1.66
UBC5	YDR059C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
UBC5	YDR059C	YPR089W	O13585	888 aa		4.65	□□□□□ -1.67
UBC5	YDR059C	BI2	P03873	423 aa		4.65	□□□□□ -1.67
UBC5	YDR059C	YMR085W	P0CF18	432 aa		4.65	□□□□□ -1.67
UBC5	YDR059C	AEP2	P22136	580 aa		4.65	□□□□□ -1.67
UBC5	YDR059C	RNR4	P49723	345 aa	Known RBP	4.65	□□□□□ -1.67
UBC5	YDR059C	CRT10	Q08226	957 aa		4.65	□□□□□ -1.67
UBC5	YDR059C	SEC12	P11655	471 aa		4.64	□□□□□ -1.67
UBC5	YDR059C	YPK1	P12688	680 aa	Known RBP	4.64	□□□□□ -1.67
UBC5	YDR059C	BET2	P20133	325 aa		4.64	□□□□□ -1.67
UBC5	YDR059C	CDC5	P32562	705 aa		4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 22 ms