RNA–Protein interactions for RNA: YCR093W

CDC39, Transcript of Component of the CCR4-NOT1 core complex, yeastyeast

Gene CDC39, Length 6,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC39YCR093W USO1P25386 1790 aa1.36□□□□□ -2.19
CDC39YCR093W PCL2P25693 308 aa1.36□□□□□ -2.19
CDC39YCR093W SEC6P32844 805 aa1.36□□□□□ -2.19
CDC39YCR093W YKL222CP35995 705 aa1.36□□□□□ -2.19
CDC39YCR093W GMH1P36125 273 aa1.36□□□□□ -2.19
CDC39YCR093W CCT8P47079 568 aaKnown RBP1.36□□□□□ -2.19
CDC39YCR093W TAF4P50105 388 aa1.36□□□□□ -2.19
CDC39YCR093W NCS6P53088 359 aa1.36□□□□□ -2.19
CDC39YCR093W HMI1Q12039 706 aa1.36□□□□□ -2.19
CDC39YCR093W HUA2Q12134 243 aa1.36□□□□□ -2.19
CDC39YCR093W DSS4P32601 143 aa1.35□□□□□ -2.19
CDC39YCR093W VPS24P36095 224 aaKnown RBP1.35□□□□□ -2.19
CDC39YCR093W BDH2P39713 417 aa1.35□□□□□ -2.19
CDC39YCR093W AIM21P40563 679 aa1.35□□□□□ -2.19
CDC39YCR093W TAH11P47112 604 aa1.35□□□□□ -2.19
CDC39YCR093W VPS64Q03944 604 aa1.35□□□□□ -2.19
CDC39YCR093W SND1Q04007 877 aa1.35□□□□□ -2.19
CDC39YCR093W MCA1Q08601 432 aa1.35□□□□□ -2.19
CDC39YCR093W TRP3P00937 484 aa1.35□□□□□ -2.19
CDC39YCR093W PET122P10355 254 aa1.35□□□□□ -2.19
CDC39YCR093W VPS33P20795 691 aa1.35□□□□□ -2.19
CDC39YCR093W OCA4P25366 362 aa1.35□□□□□ -2.19
CDC39YCR093W EUG1P32474 517 aa1.35□□□□□ -2.19
CDC39YCR093W YKL050CP35736 922 aa1.35□□□□□ -2.19
CDC39YCR093W NOP4P37838 685 aaKnown RBP1.35□□□□□ -2.19
CDC39YCR093W MEF2P39677 819 aa1.35□□□□□ -2.19
CDC39YCR093W HXT16P47185 567 aa1.35□□□□□ -2.19
CDC39YCR093W PIP2P52960 996 aa1.35□□□□□ -2.19
CDC39YCR093W MTG1Q03151 367 aaPredicted RBP1.35□□□□□ -2.19
CDC39YCR093W MUS81Q04149 632 aaPredicted RBP1.35□□□□□ -2.19
CDC39YCR093W TMA10Q06177 86 aa1.35□□□□□ -2.19
CDC39YCR093W TOS4Q06266 489 aa1.35□□□□□ -2.19
CDC39YCR093W YLR001CQ07895 862 aa1.35□□□□□ -2.19
CDC39YCR093W NOP56Q12460 504 aaKnown RBP RIP-Chip data1.35□□□□□ -2.19not detected
CDC39YCR093W YBR182C-AQ8TGU6 64 aa1.35□□□□□ -2.19
CDC39YCR093W PGI1P12709 554 aaKnown RBP1.35□□□□□ -2.19
CDC39YCR093W SRV2P17555 526 aaKnown RBP1.35□□□□□ -2.19
CDC39YCR093W HOP1P20050 605 aa1.35□□□□□ -2.19
CDC39YCR093W STE5P32917 917 aa1.35□□□□□ -2.19
CDC39YCR093W OAF3P36023 863 aa1.35□□□□□ -2.19
CDC39YCR093W APM3P38153 483 aa1.35□□□□□ -2.19
CDC39YCR093W DJP1P40564 432 aa1.35□□□□□ -2.19
CDC39YCR093W TY4A-JP47023 414 aa1.35□□□□□ -2.19
CDC39YCR093W YGR021WP53212 290 aa1.35□□□□□ -2.19
CDC39YCR093W MFM1Q02783 413 aa1.35□□□□□ -2.19
CDC39YCR093W YLR407WQ06070 228 aa1.35□□□□□ -2.19
CDC39YCR093W OMS1Q06668 471 aa1.35□□□□□ -2.19
CDC39YCR093W ADY3Q07732 790 aa1.35□□□□□ -2.19
CDC39YCR093W CWC2Q12046 339 aaPredicted RBP1.35□□□□□ -2.19
CDC39YCR093W HSP42Q12329 375 aa1.35□□□□□ -2.19
CDC39YCR093W YCK2P23292 546 aaKnown RBP1.35□□□□□ -2.19
CDC39YCR093W TGL1P34163 548 aa1.35□□□□□ -2.19
CDC39YCR093W AGP2P38090 596 aa1.35□□□□□ -2.19
CDC39YCR093W ACA1P39970 489 aa1.35□□□□□ -2.19
CDC39YCR093W CIR1P42940 261 aa1.35□□□□□ -2.19
CDC39YCR093W CTH1P47976 325 aa1.35□□□□□ -2.19
CDC39YCR093W COG2P53271 262 aa1.35□□□□□ -2.19
CDC39YCR093W ALF1P53904 254 aa1.35□□□□□ -2.19
CDC39YCR093W FDC1Q03034 503 aa1.35□□□□□ -2.19
CDC39YCR093W MCH5Q08777 521 aa1.35□□□□□ -2.19
CDC39YCR093W TCO89Q08921 799 aa1.35□□□□□ -2.19
CDC39YCR093W HEM13P11353 328 aaKnown RBP1.35□□□□□ -2.19
CDC39YCR093W CDC60P26637 1090 aaKnown RBP1.35□□□□□ -2.19
CDC39YCR093W DBF4P32325 704 aa1.35□□□□□ -2.19
CDC39YCR093W REC114P32841 428 aa1.35□□□□□ -2.19
CDC39YCR093W YKR073CP36153 106 aa1.35□□□□□ -2.19
CDC39YCR093W MTG2P38860 518 aa1.35□□□□□ -2.19
CDC39YCR093W VFA1P40080 203 aa1.35□□□□□ -2.19
CDC39YCR093W ASG1P40467 964 aa1.35□□□□□ -2.19
CDC39YCR093W YJR096WP47137 282 aa1.35□□□□□ -2.19
CDC39YCR093W OGG1P53397 376 aaPredicted RBP1.35□□□□□ -2.19
CDC39YCR093W SPC98P53540 846 aa1.35□□□□□ -2.19
CDC39YCR093W YLR224WQ05947 369 aa1.35□□□□□ -2.19
CDC39YCR093W VMA16P23968 213 aa1.34□□□□□ -2.19
CDC39YCR093W ADH7P25377 361 aa1.34□□□□□ -2.19
CDC39YCR093W PAP1P29468 568 aaKnown RBP1.34□□□□□ -2.19
CDC39YCR093W FAR3P46671 204 aa1.34□□□□□ -2.19
CDC39YCR093W VPS62P53285 467 aa1.34□□□□□ -2.19
CDC39YCR093W YLR281CQ05863 155 aa1.34□□□□□ -2.19
CDC39YCR093W THI21Q08975 551 aa1.34□□□□□ -2.19
CDC39YCR093W RCN2Q12044 265 aa1.34□□□□□ -2.19
CDC39YCR093W FUM1P08417 488 aaKnown RBP1.34□□□□□ -2.19
CDC39YCR093W SUI3P09064 285 aaKnown RBP1.34□□□□□ -2.19
CDC39YCR093W CLC1P17891 233 aa1.34□□□□□ -2.19
CDC39YCR093W KAR4P25583 335 aa1.34□□□□□ -2.19
CDC39YCR093W OTU2P38747 307 aaKnown RBP1.34□□□□□ -2.19
CDC39YCR093W DCP2P53550 970 aaKnown RBP1.34□□□□□ -2.19
CDC39YCR093W UFO1Q04511 668 aa1.34□□□□□ -2.19
CDC39YCR093W UPC2Q12151 913 aa1.34□□□□□ -2.19
CDC39YCR093W ARP7Q12406 477 aa1.34□□□□□ -2.19
CDC39YCR093W CHD1P32657 1468 aa1.34□□□□□ -2.19
CDC39YCR093W ADE5,7P07244 802 aaKnown RBP1.34□□□□□ -2.19
CDC39YCR093W PPR1P07272 904 aaPredicted RBP1.34□□□□□ -2.19
CDC39YCR093W CDC24P11433 854 aaPredicted RBP1.34□□□□□ -2.19
CDC39YCR093W FRS1P15624 595 aaKnown RBP1.34□□□□□ -2.19
CDC39YCR093W MSM1P22438 575 aa1.34□□□□□ -2.19
CDC39YCR093W DBP2P24783 546 aaKnown RBP1.34□□□□□ -2.19
CDC39YCR093W YCL002CP25565 263 aa1.34□□□□□ -2.19
CDC39YCR093W CDC20P26309 610 aa1.34□□□□□ -2.19
CDC39YCR093W PEP3P27801 918 aa1.34□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms