RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPB1	YCL054W	NGG1	P32494	702 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	CBF2	P32504	956 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	PTC7	P38797	343 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	GIP4	P39732	760 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	SAW1	P39735	261 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	TMA108	P40462	946 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	MND2	P40577	368 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	YDL183C	P48569	320 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	PUS2	P53167	370 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	UPC2	Q12151	913 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	INH1	P01097	85 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	ADE2	P21264	571 aa	Known RBP	2.99	□□□□□ -1.93
SPB1	YCL054W	XRS2	P33301	854 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	YHR078W	P38799	552 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	SAK1	P38990	1142 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	MSS4	P38994	779 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	NOP16	P40007	231 aa	Known RBP	2.99	□□□□□ -1.93
SPB1	YCL054W	ZRG8	P40021	1076 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	GTS1	P40956	396 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	SRB7	P47822	140 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	GPD1	Q00055	391 aa	Known RBP	2.99	□□□□□ -1.93
SPB1	YCL054W	YMR210W	Q03649	449 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	SSY1	Q03770	852 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	VPS36	Q06696	566 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	ADY3	Q07732	790 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	SPE1	P08432	466 aa		2.98	□□□□□ -1.93
SPB1	YCL054W	SWI4	P25302	1093 aa	Known RBP	2.98	□□□□□ -1.93
SPB1	YCL054W	PRE4	P30657	266 aa		2.98	□□□□□ -1.93
SPB1	YCL054W	PAH1	P32567	862 aa		2.98	□□□□□ -1.93
SPB1	YCL054W	RPS0A	P32905	252 aa	Known RBP	2.98	□□□□□ -1.93
SPB1	YCL054W	RMA1	P36001	430 aa	Known RBP	2.98	□□□□□ -1.93
SPB1	YCL054W	YNL195C	P40168	261 aa		2.98	□□□□□ -1.93
SPB1	YCL054W	RIC1	P40395	1056 aa		2.98	□□□□□ -1.93
SPB1	YCL054W	SMK1	P41808	388 aa		2.98	□□□□□ -1.93
SPB1	YCL054W	PEF1	P53238	335 aa		2.98	□□□□□ -1.93
SPB1	YCL054W	PLB2	Q03674	706 aa		2.98	□□□□□ -1.93
SPB1	YCL054W	RGC1	Q06108	1083 aa	Known RBP	2.98	□□□□□ -1.93
SPB1	YCL054W	ISA1	Q07821	250 aa	Predicted RBP	2.98	□□□□□ -1.93
SPB1	YCL054W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
SPB1	YCL054W	RRP5	Q05022	1729 aa	Known RBP	2.98	□□□□□ -1.93
SPB1	YCL054W	TY4B-H	P0C2J7	1802 aa		2.98	□□□□□ -1.93
SPB1	YCL054W	TY4B-J	P47024	1803 aa		2.98	□□□□□ -1.93
SPB1	YCL054W	SIR1	P21691	654 aa		2.98	□□□□□ -1.93
SPB1	YCL054W	ARG1	P22768	420 aa		2.98	□□□□□ -1.93
SPB1	YCL054W	ERG6	P25087	383 aa	Known RBP	2.98	□□□□□ -1.93
SPB1	YCL054W	APN2	P38207	520 aa		2.98	□□□□□ -1.93
SPB1	YCL054W	YER010C	P40011	234 aa		2.98	□□□□□ -1.93
SPB1	YCL054W	CTF18	P49956	741 aa		2.98	□□□□□ -1.93
SPB1	YCL054W	MRPS35	P53292	345 aa		2.98	□□□□□ -1.93
SPB1	YCL054W	ASI2	P53895	289 aa		2.98	□□□□□ -1.93
SPB1	YCL054W	ARG5,6	Q01217	863 aa		2.98	□□□□□ -1.93
SPB1	YCL054W	MRPL13	Q02204	264 aa		2.98	□□□□□ -1.93
SPB1	YCL054W	GSF2	Q04697	403 aa	Known RBP	2.98	□□□□□ -1.93
SPB1	YCL054W	YRF1-2	P40105	1681 aa		2.97	□□□□□ -1.93
SPB1	YCL054W	CDC6	P09119	513 aa		2.97	□□□□□ -1.93
SPB1	YCL054W	FRS1	P15624	595 aa	Known RBP	2.97	□□□□□ -1.93
SPB1	YCL054W	DGR2	P32330	852 aa		2.97	□□□□□ -1.93
SPB1	YCL054W	PET127	P32606	800 aa		2.97	□□□□□ -1.93
SPB1	YCL054W	SDS22	P36047	338 aa		2.97	□□□□□ -1.93
SPB1	YCL054W	YHR112C	P38716	378 aa		2.97	□□□□□ -1.93
SPB1	YCL054W	BCD1	P38772	366 aa		2.97	□□□□□ -1.93
SPB1	YCL054W	RAD26	P40352	1085 aa		2.97	□□□□□ -1.93
SPB1	YCL054W	VHR1	P40522	640 aa		2.97	□□□□□ -1.93
SPB1	YCL054W	FAF1	P40546	346 aa	Predicted RBP	2.97	□□□□□ -1.93
SPB1	YCL054W	EXG2	P52911	562 aa		2.97	□□□□□ -1.93
SPB1	YCL054W	ACS1	Q01574	713 aa		2.97	□□□□□ -1.93
SPB1	YCL054W	VHS3	Q08438	674 aa		2.97	□□□□□ -1.93
SPB1	YCL054W	RVB2	Q12464	471 aa	Known RBP	2.97	□□□□□ -1.93
SPB1	YCL054W	PHO5	P00635	467 aa		2.97	□□□□□ -1.93
SPB1	YCL054W	URA3	P03962	267 aa		2.97	□□□□□ -1.93
SPB1	YCL054W	POL3	P15436	1097 aa		2.97	□□□□□ -1.93
SPB1	YCL054W	SEC21	P32074	935 aa	Known RBP	2.97	□□□□□ -1.93
SPB1	YCL054W	YKR075C	P36155	307 aa		2.97	□□□□□ -1.93
SPB1	YCL054W	SSP120	P39931	234 aa	Known RBP	2.97	□□□□□ -1.93
SPB1	YCL054W	MTR3	P48240	250 aa	Predicted RBP	2.97	□□□□□ -1.93
SPB1	YCL054W	NCS6	P53088	359 aa		2.97	□□□□□ -1.93
SPB1	YCL054W	TSR2	Q06672	205 aa	Known RBP	2.97	□□□□□ -1.93
SPB1	YCL054W	IWR1	Q07532	353 aa	Predicted RBP	2.97	□□□□□ -1.93
SPB1	YCL054W	PCD1	Q12524	340 aa		2.97	□□□□□ -1.93
SPB1	YCL054W	VPS5	Q92331	675 aa		2.97	□□□□□ -1.93
SPB1	YCL054W	PSK1	P31374	1356 aa		2.97	□□□□□ -1.93
SPB1	YCL054W	CYC1	P00044	109 aa	Predicted RBP	2.96	□□□□□ -1.93
SPB1	YCL054W	GAL10	P04397	699 aa		2.96	□□□□□ -1.93
SPB1	YCL054W	ADE3	P07245	946 aa	Known RBP	2.96	□□□□□ -1.93
SPB1	YCL054W	KIN2	P13186	1147 aa	Known RBP	2.96	□□□□□ -1.93
SPB1	YCL054W	DHR2	P36009	735 aa	Predicted RBP	2.96	□□□□□ -1.93
SPB1	YCL054W	YLF2	P38746	405 aa		2.96	□□□□□ -1.93
SPB1	YCL054W	TPA1	P40032	644 aa	Known RBP	2.96	□□□□□ -1.93
SPB1	YCL054W	BIT61	P47041	543 aa		2.96	□□□□□ -1.93
SPB1	YCL054W	GCV2	P49095	1034 aa		2.96	□□□□□ -1.93
SPB1	YCL054W	TAF4	P50105	388 aa		2.96	□□□□□ -1.93
SPB1	YCL054W	ARE2	P53629	642 aa	Known RBP	2.96	□□□□□ -1.93
SPB1	YCL054W	TIM10	P87108	93 aa		2.96	□□□□□ -1.93
SPB1	YCL054W	NSE5	Q03718	556 aa		2.96	□□□□□ -1.93
SPB1	YCL054W	RSM24	Q03976	319 aa		2.96	□□□□□ -1.93
SPB1	YCL054W	TAF11	Q04226	346 aa		2.96	□□□□□ -1.93
SPB1	YCL054W	TDA9	Q04545	1251 aa		2.96	□□□□□ -1.93
SPB1	YCL054W	PGA3	Q12746	312 aa	Known RBP	2.96	□□□□□ -1.93
SPB1	YCL054W	ADE6	P38972	1358 aa	Known RBP	2.96	□□□□□ -1.93
SPB1	YCL054W	YLR419W	Q06698	1435 aa	Known RBP	2.96	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms