RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C TUS1Q06412 1307 aa2.52□□□□□ -2.01
CLN3YAL040C TUF1P02992 437 aaKnown RBP2.51□□□□□ -2.01
CLN3YAL040C NUC1P08466 329 aa2.51□□□□□ -2.01
CLN3YAL040C PFK1P16861 987 aaKnown RBP2.51□□□□□ -2.01
CLN3YAL040C GSY2P27472 705 aa2.51□□□□□ -2.01
CLN3YAL040C HRR25P29295 494 aaKnown RBP2.51□□□□□ -2.01
CLN3YAL040C PLC1P32383 869 aa2.51□□□□□ -2.01
CLN3YAL040C YKL107WP34251 309 aa2.51□□□□□ -2.01
CLN3YAL040C YPT53P36019 220 aa2.51□□□□□ -2.01
CLN3YAL040C RFT1P38206 574 aaPredicted RBP2.51□□□□□ -2.01
CLN3YAL040C ERG7P38604 731 aa2.51□□□□□ -2.01
CLN3YAL040C ECM29P38737 1868 aa2.51□□□□□ -2.01
CLN3YAL040C YAP1801P38856 637 aa2.51□□□□□ -2.01
CLN3YAL040C MGS1P40151 587 aa2.51□□□□□ -2.01
CLN3YAL040C YGR153WP48238 217 aa2.51□□□□□ -2.01
CLN3YAL040C MET14Q02196 202 aa2.51□□□□□ -2.01
CLN3YAL040C TIM50Q02776 476 aa2.51□□□□□ -2.01
CLN3YAL040C WAR1Q03631 944 aa2.51□□□□□ -2.01
CLN3YAL040C ADY4Q05955 493 aa2.51□□□□□ -2.01
CLN3YAL040C SMD2Q06217 110 aaKnown RBP2.51□□□□□ -2.01
CLN3YAL040C MMR1Q06324 491 aa2.51□□□□□ -2.01
CLN3YAL040C XYL2Q07993 356 aa2.51□□□□□ -2.01
CLN3YAL040C YOL075CQ08234 1294 aa2.51□□□□□ -2.01
CLN3YAL040C AFT2Q08957 416 aa2.51□□□□□ -2.01
CLN3YAL040C YPL216WQ08964 1102 aa2.51□□□□□ -2.01
CLN3YAL040C PCL8Q08966 492 aa2.51□□□□□ -2.01
CLN3YAL040C RRP6Q12149 733 aaKnown RBP2.51□□□□□ -2.01
CLN3YAL040C HIS4P00815 799 aaKnown RBP2.51□□□□□ -2.01
CLN3YAL040C PHR1P05066 565 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
CLN3YAL040C SPE1P08432 466 aa2.51□□□□□ -2.01
CLN3YAL040C HSF1P10961 833 aa2.51□□□□□ -2.01
CLN3YAL040C ALG1P16661 449 aa2.51□□□□□ -2.01
CLN3YAL040C MEF1P25039 761 aa2.51□□□□□ -2.01
CLN3YAL040C CDC15P27636 974 aa2.51□□□□□ -2.01
CLN3YAL040C FUN30P31380 1131 aa2.51□□□□□ -2.01
CLN3YAL040C ABD1P32783 436 aaPredicted RBP2.51□□□□□ -2.01
CLN3YAL040C MOT2P34909 587 aaKnown RBP2.51□□□□□ -2.01
CLN3YAL040C JNM1P36224 373 aa2.51□□□□□ -2.01
CLN3YAL040C CST26P38226 397 aa2.51□□□□□ -2.01
CLN3YAL040C CCC2P38995 1004 aa2.51□□□□□ -2.01
CLN3YAL040C STT3P39007 718 aaKnown RBP2.51□□□□□ -2.01
CLN3YAL040C ALG2P43636 503 aa2.51□□□□□ -2.01
CLN3YAL040C CUE3P53137 624 aaKnown RBP2.51□□□□□ -2.01
CLN3YAL040C YGR012WP53206 393 aa2.51□□□□□ -2.01
CLN3YAL040C SDA1P53313 767 aaKnown RBP2.51□□□□□ -2.01
CLN3YAL040C NPL3Q01560 414 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
CLN3YAL040C CRF1Q04930 467 aa2.51□□□□□ -2.01
CLN3YAL040C TMA16Q08687 178 aa2.51□□□□□ -2.01
CLN3YAL040C MPD2Q99316 277 aa2.51□□□□□ -2.01
CLN3YAL040C FBP1P09201 348 aa2.5□□□□□ -2.01
CLN3YAL040C PTP2P29461 750 aa2.5□□□□□ -2.01
CLN3YAL040C SAC6P32599 642 aaKnown RBP2.5□□□□□ -2.01
CLN3YAL040C SRP101P32916 621 aa2.5□□□□□ -2.01
CLN3YAL040C SHP1P34223 423 aa2.5□□□□□ -2.01
CLN3YAL040C YEL1P34225 687 aa2.5□□□□□ -2.01
CLN3YAL040C OAR1P35731 278 aa2.5□□□□□ -2.01
CLN3YAL040C YKT6P36015 200 aaKnown RBP2.5□□□□□ -2.01
CLN3YAL040C MIC60P36112 540 aa2.5□□□□□ -2.01
CLN3YAL040C PET10P36139 283 aa2.5□□□□□ -2.01
CLN3YAL040C EXO84P38261 753 aa2.5□□□□□ -2.01
CLN3YAL040C SUL1P38359 859 aa2.5□□□□□ -2.01
CLN3YAL040C RTT107P38850 1070 aa2.5□□□□□ -2.01
CLN3YAL040C VPS45P38932 577 aa2.5□□□□□ -2.01
CLN3YAL040C TIF4631P39935 952 aaKnown RBP2.5□□□□□ -2.01
CLN3YAL040C FAF1P40546 346 aaPredicted RBP2.5□□□□□ -2.01
CLN3YAL040C ALR2P43553 858 aa2.5□□□□□ -2.01
CLN3YAL040C RSC8P43609 557 aaKnown RBP2.5□□□□□ -2.01
CLN3YAL040C YGL176CP46945 554 aa2.5□□□□□ -2.01
CLN3YAL040C YGL039WP53183 348 aaKnown RBP2.5□□□□□ -2.01
CLN3YAL040C RET3P53600 189 aa2.5□□□□□ -2.01
CLN3YAL040C HFD1Q04458 532 aa2.5□□□□□ -2.01
CLN3YAL040C VIP1Q06685 1146 aaKnown RBP2.5□□□□□ -2.01
CLN3YAL040C CDA1Q06702 301 aa2.5□□□□□ -2.01
CLN3YAL040C RLP24Q07915 199 aaKnown RBP2.5□□□□□ -2.01
CLN3YAL040C MDM38Q08179 573 aa2.5□□□□□ -2.01
CLN3YAL040C ENB1Q08299 606 aa2.5□□□□□ -2.01
CLN3YAL040C KCS1Q12494 1050 aa2.5□□□□□ -2.01
CLN3YAL040C CSR2Q12734 1121 aa2.5□□□□□ -2.01
CLN3YAL040C NBL1Q3E7Y6 73 aa2.5□□□□□ -2.01
CLN3YAL040C FOB1O13329 566 aa2.49□□□□□ -2.01
CLN3YAL040C ILV1P00927 576 aaKnown RBP2.49□□□□□ -2.01
CLN3YAL040C GAL1P04385 528 aa2.49□□□□□ -2.01
CLN3YAL040C CDC31P06704 161 aaKnown RBP2.49□□□□□ -2.01
CLN3YAL040C YEL076C-AP0CX16 216 aa2.49□□□□□ -2.01
CLN3YAL040C YLR464WP0CX17 216 aa2.49□□□□□ -2.01
CLN3YAL040C SAM1P10659 382 aaKnown RBP2.49□□□□□ -2.01
CLN3YAL040C THR4P16120 514 aaKnown RBP2.49□□□□□ -2.01
CLN3YAL040C GSY1P23337 708 aa2.49□□□□□ -2.01
CLN3YAL040C MCM3P24279 971 aaKnown RBP2.49□□□□□ -2.01
CLN3YAL040C PSO2P30620 661 aa2.49□□□□□ -2.01
CLN3YAL040C SAS3P34218 831 aa2.49□□□□□ -2.01
CLN3YAL040C ATG19P35193 415 aa2.49□□□□□ -2.01
CLN3YAL040C RRN3P36070 627 aa2.49□□□□□ -2.01
CLN3YAL040C PHO88P38264 188 aaPredicted RBP2.49□□□□□ -2.01
CLN3YAL040C RIM4P38741 713 aa2.49□□□□□ -2.01
CLN3YAL040C TOM71P38825 639 aaKnown RBP2.49□□□□□ -2.01
CLN3YAL040C GAA1P39012 614 aa2.49□□□□□ -2.01
CLN3YAL040C ACA1P39970 489 aa2.49□□□□□ -2.01
CLN3YAL040C YEL076CP39971 216 aa2.49□□□□□ -2.01
CLN3YAL040C ULP2P40537 1034 aaPredicted RBP2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms