RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W ADY4Q05955 493 aa2.42□□□□□ -2.02
SNC1YAL030W TSR2Q06672 205 aaKnown RBP2.42□□□□□ -2.02
SNC1YAL030W YFT2Q06676 274 aa2.42□□□□□ -2.02
SNC1YAL030W CDA2Q06703 312 aa2.42□□□□□ -2.02
SNC1YAL030W IMH1Q06704 911 aaKnown RBP2.42□□□□□ -2.02
SNC1YAL030W MED1Q12321 566 aa2.42□□□□□ -2.02
SNC1YAL030W SEM1O94742 89 aa2.41□□□□□ -2.02
SNC1YAL030W SIR3P06701 978 aa2.41□□□□□ -2.02
SNC1YAL030W CDC31P06704 161 aaKnown RBP2.41□□□□□ -2.02
SNC1YAL030W NUC1P08466 329 aa2.41□□□□□ -2.02
SNC1YAL030W PCK1P10963 549 aa2.41□□□□□ -2.02
SNC1YAL030W SEC12P11655 471 aa2.41□□□□□ -2.02
SNC1YAL030W PRP6P19735 899 aaPredicted RBP2.41□□□□□ -2.02
SNC1YAL030W BET2P20133 325 aa2.41□□□□□ -2.02
SNC1YAL030W PRE10P21242 288 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
SNC1YAL030W RIT1P23796 513 aa2.41□□□□□ -2.02
SNC1YAL030W CAD1P24813 409 aaKnown RBP2.41□□□□□ -2.02
SNC1YAL030W FEN2P25621 512 aaKnown RBP2.41□□□□□ -2.02
SNC1YAL030W BCS1P32839 456 aa2.41□□□□□ -2.02
SNC1YAL030W LST4P34239 828 aa2.41□□□□□ -2.02
SNC1YAL030W MPE1P35728 441 aaKnown RBP2.41□□□□□ -2.02
SNC1YAL030W YBR138CP38277 524 aa2.41□□□□□ -2.02
SNC1YAL030W SFB3P38810 929 aa2.41□□□□□ -2.02
SNC1YAL030W FMO1P38866 432 aa2.41□□□□□ -2.02
SNC1YAL030W PIG2P40187 538 aa2.41□□□□□ -2.02
SNC1YAL030W ELO3P40319 345 aa2.41□□□□□ -2.02
SNC1YAL030W LRO1P40345 661 aa2.41□□□□□ -2.02
SNC1YAL030W PSF2P40359 213 aa2.41□□□□□ -2.02
SNC1YAL030W ESL1P40456 1118 aa2.41□□□□□ -2.02
SNC1YAL030W CAB2P40506 365 aa2.41□□□□□ -2.02
SNC1YAL030W FKH2P41813 862 aa2.41□□□□□ -2.02
SNC1YAL030W POL31P46957 487 aa2.41□□□□□ -2.02
SNC1YAL030W TEL2P53038 688 aa2.41□□□□□ -2.02
SNC1YAL030W PRP43P53131 767 aaKnown RBP2.41□□□□□ -2.02
SNC1YAL030W MTL1P53214 551 aa2.41□□□□□ -2.02
SNC1YAL030W MDR1P53258 950 aa2.41□□□□□ -2.02
SNC1YAL030W GIR2Q03768 265 aaPredicted RBP2.41□□□□□ -2.02
SNC1YAL030W VPS64Q03944 604 aa2.41□□□□□ -2.02
SNC1YAL030W GSF2Q04697 403 aaKnown RBP2.41□□□□□ -2.02
SNC1YAL030W SDH5Q08230 162 aa2.41□□□□□ -2.02
SNC1YAL030W YDR056CQ12025 205 aa2.41□□□□□ -2.02
SNC1YAL030W CHS5Q12114 671 aaKnown RBP2.41□□□□□ -2.02
SNC1YAL030W LAS17Q12446 633 aa2.41□□□□□ -2.02
SNC1YAL030W SNF1P06782 633 aaKnown RBP2.4□□□□□ -2.03
SNC1YAL030W ADE3P07245 946 aaKnown RBP2.4□□□□□ -2.03
SNC1YAL030W CAF20P12962 161 aaKnown RBP2.4□□□□□ -2.03
SNC1YAL030W VPS33P20795 691 aa2.4□□□□□ -2.03
SNC1YAL030W VPS34P22543 875 aa2.4□□□□□ -2.03
SNC1YAL030W RAD16P31244 790 aa2.4□□□□□ -2.03
SNC1YAL030W NTH1P32356 751 aa2.4□□□□□ -2.03
SNC1YAL030W TEF4P36008 412 aaKnown RBP2.4□□□□□ -2.03
SNC1YAL030W DHR2P36009 735 aaPredicted RBP2.4□□□□□ -2.03
SNC1YAL030W AIM3P38266 947 aaKnown RBP2.4□□□□□ -2.03
SNC1YAL030W IFA38P38286 347 aa2.4□□□□□ -2.03
SNC1YAL030W COS111P38308 924 aa2.4□□□□□ -2.03
SNC1YAL030W AXL2P38928 823 aa2.4□□□□□ -2.03
SNC1YAL030W UME6P39001 836 aa2.4□□□□□ -2.03
SNC1YAL030W YJL193WP39542 402 aa2.4□□□□□ -2.03
SNC1YAL030W FMP52P40008 231 aa2.4□□□□□ -2.03
SNC1YAL030W YER010CP40011 234 aa2.4□□□□□ -2.03
SNC1YAL030W VFA1P40080 203 aa2.4□□□□□ -2.03
SNC1YAL030W RIC1P40395 1056 aa2.4□□□□□ -2.03
SNC1YAL030W BUL1P48524 976 aa2.4□□□□□ -2.03
SNC1YAL030W MNN10P50108 393 aaKnown RBP2.4□□□□□ -2.03
SNC1YAL030W MUP1P50276 574 aa2.4□□□□□ -2.03
SNC1YAL030W PSP1P50896 841 aaKnown RBP2.4□□□□□ -2.03
SNC1YAL030W UBC11P52492 156 aa2.4□□□□□ -2.03
SNC1YAL030W RRT6P53117 311 aaPredicted RBP2.4□□□□□ -2.03
SNC1YAL030W YAP1802P53309 568 aa2.4□□□□□ -2.03
SNC1YAL030W YPL108WQ02872 168 aaPredicted RBP2.4□□□□□ -2.03
SNC1YAL030W ATG21Q02887 496 aa2.4□□□□□ -2.03
SNC1YAL030W TMA10Q06177 86 aa2.4□□□□□ -2.03
SNC1YAL030W AIM6Q07716 390 aa2.4□□□□□ -2.03
SNC1YAL030W YLR358CO13565 187 aa2.39□□□□□ -2.03
SNC1YAL030W INH1P01097 85 aa2.39□□□□□ -2.03
SNC1YAL030W MRP7P12687 371 aa2.39□□□□□ -2.03
SNC1YAL030W GUK1P15454 187 aaKnown RBP2.39□□□□□ -2.03
SNC1YAL030W GAS1P22146 559 aaKnown RBP2.39□□□□□ -2.03
SNC1YAL030W SWI4P25302 1093 aaKnown RBP2.39□□□□□ -2.03
SNC1YAL030W YCR015CP25616 317 aa2.39□□□□□ -2.03
SNC1YAL030W MVD1P32377 396 aaKnown RBP2.39□□□□□ -2.03
SNC1YAL030W ARP2P32381 391 aaKnown RBP2.39□□□□□ -2.03
SNC1YAL030W MSS1P32559 526 aaPredicted RBP2.39□□□□□ -2.03
SNC1YAL030W DSS4P32601 143 aa2.39□□□□□ -2.03
SNC1YAL030W CTP1P38152 299 aa2.39□□□□□ -2.03
SNC1YAL030W BCD1P38772 366 aa2.39□□□□□ -2.03
SNC1YAL030W REV7P38927 245 aa2.39□□□□□ -2.03
SNC1YAL030W YEL025CP39991 1188 aa2.39□□□□□ -2.03
SNC1YAL030W DPH1P40487 425 aaKnown RBP2.39□□□□□ -2.03
SNC1YAL030W YIL077CP40508 320 aa2.39□□□□□ -2.03
SNC1YAL030W UPF3P48412 387 aaKnown RBP2.39□□□□□ -2.03
SNC1YAL030W RFX1P48743 811 aa2.39□□□□□ -2.03
SNC1YAL030W ACS1Q01574 713 aa2.39□□□□□ -2.03
SNC1YAL030W CLU1Q03690 1277 aaKnown RBP2.39□□□□□ -2.03
SNC1YAL030W SPC19Q03954 165 aa2.39□□□□□ -2.03
SNC1YAL030W YKU80Q04437 629 aa2.39□□□□□ -2.03
SNC1YAL030W ARR3Q06598 404 aa2.39□□□□□ -2.03
SNC1YAL030W VAM6Q07468 1049 aa2.39□□□□□ -2.03
SNC1YAL030W IZH3Q07959 543 aa2.39□□□□□ -2.03
SNC1YAL030W PMA1P05030 918 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms