RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 STT3P39007 718 aaKnown RBP9.6□□□□□ -0.87
NME1NME1 KHA1P40309 873 aa9.6□□□□□ -0.87
NME1NME1 GSM1P42950 618 aa9.6□□□□□ -0.87
NME1NME1 CRD1Q07560 283 aa9.6□□□□□ -0.87
NME1NME1 SPC72P39723 622 aa9.59□□□□□ -0.87
NME1NME1 YGR054WP53235 642 aaKnown RBP9.59□□□□□ -0.87
NME1NME1 KIN4Q01919 800 aa9.59□□□□□ -0.87
NME1NME1 AAD4Q07747 329 aa9.59□□□□□ -0.87
NME1NME1 USV1Q12132 391 aa9.59□□□□□ -0.87
NME1NME1 VPS33P20795 691 aa9.58□□□□□ -0.88
NME1NME1 FUB1P25659 250 aa9.58□□□□□ -0.88
NME1NME1 EXO84P38261 753 aa9.58□□□□□ -0.88
NME1NME1 AIM21P40563 679 aa9.58□□□□□ -0.88
NME1NME1 SSL2Q00578 843 aa9.58□□□□□ -0.88
NME1NME1 EIS1Q05050 843 aaKnown RBP9.58□□□□□ -0.88
NME1NME1 YSH1Q06224 779 aaPredicted RBP9.58□□□□□ -0.88
NME1NME1 IZH3Q07959 543 aa9.58□□□□□ -0.88
NME1NME1 PCK1P10963 549 aa9.57□□□□□ -0.88
NME1NME1 YJL193WP39542 402 aa9.57□□□□□ -0.88
NME1NME1 GIP4P39732 760 aa9.57□□□□□ -0.88
NME1NME1 LRO1P40345 661 aa9.57□□□□□ -0.88
NME1NME1 ERR3P42222 437 aa9.57□□□□□ -0.88
NME1NME1 TAF1P46677 1066 aa9.57□□□□□ -0.88
NME1NME1 CPR6P53691 371 aaKnown RBP9.57□□□□□ -0.88
NME1NME1 YDL086WQ07505 273 aa9.57□□□□□ -0.88
NME1NME1 MIS1P09440 975 aaKnown RBP9.56□□□□□ -0.88
NME1NME1 SIR1P21691 654 aa9.56□□□□□ -0.88
NME1NME1 MCM3P24279 971 aaKnown RBP9.56□□□□□ -0.88
NME1NME1 DHR2P36009 735 aaPredicted RBP9.56□□□□□ -0.88
NME1NME1 ACS1Q01574 713 aa9.56□□□□□ -0.88
NME1NME1 POL3P15436 1097 aa9.55□□□□□ -0.88
NME1NME1 FAF1P40546 346 aaPredicted RBP9.55□□□□□ -0.88
NME1NME1 CIA1Q05583 330 aa9.55□□□□□ -0.88
NME1NME1 IWR1Q07532 353 aaPredicted RBP9.55□□□□□ -0.88
NME1NME1 YHL017WP38745 532 aa9.54□□□□□ -0.88
NME1NME1 VFA1P40080 203 aa9.54□□□□□ -0.88
NME1NME1 YGR151CP53287 111 aa9.54□□□□□ -0.88
NME1NME1 ATG4P53867 494 aa9.54□□□□□ -0.88
NME1NME1 VPS72Q03388 795 aa9.54□□□□□ -0.88
NME1NME1 ENT2Q05785 613 aa9.54□□□□□ -0.88
NME1NME1 ARR3Q06598 404 aa9.54□□□□□ -0.88
NME1NME1 YDL121CQ07541 149 aa9.54□□□□□ -0.88
NME1NME1 CBR1P38626 284 aaKnown RBP9.53□□□□□ -0.88
NME1NME1 PCL5P38794 229 aa9.53□□□□□ -0.88
NME1NME1 IML2P47031 731 aa9.53□□□□□ -0.88
NME1NME1 ELF1P36053 145 aa9.52□□□□□ -0.89
NME1NME1 YHR097CP38809 366 aaKnown RBP9.52□□□□□ -0.89
NME1NME1 YML131WQ03102 365 aa9.52□□□□□ -0.89
NME1NME1 NKP1Q12493 238 aa9.52□□□□□ -0.89
NME1NME1 SSM4P40318 1319 aa9.52□□□□□ -0.89
NME1NME1 CTT1P06115 562 aa9.51□□□□□ -0.89
NME1NME1 SSH4P32343 579 aa9.51□□□□□ -0.89
NME1NME1 DSS4P32601 143 aa9.51□□□□□ -0.89
NME1NME1 APL3P38065 1025 aa9.51□□□□□ -0.89
NME1NME1 NAB3P38996 802 aaKnown RBP RIP-Chip data9.51□□□□□ -0.89not detected
NME1NME1 ARG2P40360 574 aa9.51□□□□□ -0.89
NME1NME1 MSE1P48525 536 aa9.51□□□□□ -0.89
NME1NME1 SUN4P53616 420 aa9.51□□□□□ -0.89
NME1NME1 TRS31Q03337 283 aa9.51□□□□□ -0.89
NME1NME1 VPS64Q03944 604 aa9.51□□□□□ -0.89
NME1NME1 ARA2Q04212 335 aa9.51□□□□□ -0.89
NME1NME1 TUB2P02557 457 aaKnown RBP9.5□□□□□ -0.89
NME1NME1 SET3P36124 751 aa9.5□□□□□ -0.89
NME1NME1 MRPL7P36519 292 aa9.5□□□□□ -0.89
NME1NME1 PUG1P40100 303 aa9.5□□□□□ -0.89
NME1NME1 POL31P46957 487 aa9.5□□□□□ -0.89
NME1NME1 GTR1Q00582 310 aa9.5□□□□□ -0.89
NME1NME1 EFR3Q03653 782 aaKnown RBP9.5□□□□□ -0.89
NME1NME1 YMR206WQ03695 313 aa9.5□□□□□ -0.89
NME1NME1 FRD1P32614 470 aaKnown RBP9.49□□□□□ -0.89
NME1NME1 PSY4P38193 441 aa9.49□□□□□ -0.89
NME1NME1 STB5P38699 743 aa9.49□□□□□ -0.89
NME1NME1 NDC80P40460 691 aa9.49□□□□□ -0.89
NME1NME1 CAB2P40506 365 aa9.49□□□□□ -0.89
NME1NME1 DIP5P53388 608 aa9.49□□□□□ -0.89
NME1NME1 SMX3P54999 86 aaPredicted RBP9.49□□□□□ -0.89
NME1NME1 MRPL13Q02204 264 aa9.49□□□□□ -0.89
NME1NME1 UFO1Q04511 668 aa9.49□□□□□ -0.89
NME1NME1 RIT1P23796 513 aa9.48□□□□□ -0.89
NME1NME1 CLB4P24871 460 aa9.48□□□□□ -0.89
NME1NME1 YCL049CP25577 312 aa9.48□□□□□ -0.89
NME1NME1 PRP45P28004 379 aaPredicted RBP9.48□□□□□ -0.89
NME1NME1 CAP1P28495 268 aaKnown RBP9.48□□□□□ -0.89
NME1NME1 BEM3P32873 1128 aa9.48□□□□□ -0.89
NME1NME1 SMK1P41808 388 aa9.48□□□□□ -0.89
NME1NME1 TRS130Q03660 1102 aa9.48□□□□□ -0.89
NME1NME1 HOF1Q05080 669 aa9.48□□□□□ -0.89
NME1NME1 ACF2Q12168 779 aa9.48□□□□□ -0.89
NME1NME1 RKI1Q12189 258 aa9.48□□□□□ -0.89
NME1NME1 NUC1P08466 329 aa9.47□□□□□ -0.89
NME1NME1 RPS7AP26786 190 aaKnown RBP9.47□□□□□ -0.89
NME1NME1 XRS2P33301 854 aa9.47□□□□□ -0.89
NME1NME1 KSP1P38691 1029 aaKnown RBP9.47□□□□□ -0.89
NME1NME1 THI6P41835 540 aa9.47□□□□□ -0.89
NME1NME1 CTR1P49573 406 aa9.47□□□□□ -0.89
NME1NME1 NMA2P53204 395 aa9.47□□□□□ -0.89
NME1NME1 ARC35P53731 342 aaKnown RBP9.47□□□□□ -0.89
NME1NME1 MFM1Q02783 413 aa9.47□□□□□ -0.89
NME1NME1 GFA1P14742 717 aaKnown RBP9.46□□□□□ -0.9
NME1NME1 MRPL36P36531 177 aa9.46□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms