RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 B4E1Z4 1266 aa16■□□□□ 0.15
PHGDH-233ENST00000642021 SH2B2O14492 632 aaPredicted RBP16■□□□□ 0.15
PHGDH-233ENST00000642021 NPHP1O15259 732 aa16■□□□□ 0.15
PHGDH-233ENST00000642021 APPP05067 770 aa16■□□□□ 0.15
PHGDH-233ENST00000642021 ITGA6P23229 1130 aa16■□□□□ 0.15
PHGDH-233ENST00000642021 SYKP43405 635 aa16■□□□□ 0.15
PHGDH-233ENST00000642021 ELF2Q15723 593 aa16■□□□□ 0.15
PHGDH-233ENST00000642021 LRRN4CLQ8ND94 238 aa16■□□□□ 0.15
PHGDH-233ENST00000642021 HPSEQ9Y251 543 aa16■□□□□ 0.15
PHGDH-233ENST00000642021 ZMYM6O95789 1325 aa16■□□□□ 0.15
PHGDH-233ENST00000642021 IDH1O75874 414 aaKnown RBP16■□□□□ 0.15
PHGDH-233ENST00000642021 SFPQP23246 707 aaKnown RBP eCLIP16■□□□□ 0.15
PHGDH-233ENST00000642021 TRDNQ13061 729 aa16■□□□□ 0.15
PHGDH-233ENST00000642021 PNOCQ13519 176 aa16■□□□□ 0.15
PHGDH-233ENST00000642021 APOA5Q6Q788 366 aa16■□□□□ 0.15
PHGDH-233ENST00000642021 MICU3Q86XE3 530 aa16■□□□□ 0.15
PHGDH-233ENST00000642021 FOXP4Q8IVH2 680 aaPredicted RBP16■□□□□ 0.15
PHGDH-233ENST00000642021 TTLL11Q8NHH1 800 aa16■□□□□ 0.15
PHGDH-233ENST00000642021 TUBE1Q9UJT0 475 aa16■□□□□ 0.15
PHGDH-233ENST00000642021 ASAP1Q9ULH1 1129 aa16■□□□□ 0.15
PHGDH-233ENST00000642021 SYT10Q6XYQ8 523 aa15.99■□□□□ 0.15
PHGDH-233ENST00000642021 MAP3K14Q99558 947 aa15.99■□□□□ 0.15
PHGDH-233ENST00000642021 FAM217BQ9NTX9 383 aaPredicted RBP15.99■□□□□ 0.15
PHGDH-233ENST00000642021 WDR19Q8NEZ3 1342 aa15.99■□□□□ 0.15
PHGDH-233ENST00000642021 UBR2Q8IWV8 1755 aa15.99■□□□□ 0.15
PHGDH-233ENST00000642021 RANBP6O60518 1105 aaKnown RBP15.99■□□□□ 0.15
PHGDH-233ENST00000642021 IL2RBP14784 551 aa15.99■□□□□ 0.15
PHGDH-233ENST00000642021 NTRK3Q16288 839 aa15.99■□□□□ 0.15
PHGDH-233ENST00000642021 FBXO38Q6PIJ6 1188 aa15.99■□□□□ 0.15
PHGDH-233ENST00000642021 CADPS2Q86UW7 1296 aa15.99■□□□□ 0.15
PHGDH-233ENST00000642021 TNS2Q63HR2 1409 aa15.99■□□□□ 0.15
PHGDH-233ENST00000642021 PARP4Q9UKK3 1724 aaKnown RBP15.99■□□□□ 0.15
PHGDH-233ENST00000642021 CCDC150Q8NCX0 1101 aa15.98■□□□□ 0.15
PHGDH-233ENST00000642021 IGDCC4Q8TDY8 1250 aa15.98■□□□□ 0.15
PHGDH-233ENST00000642021 ERO1AQ96HE7 468 aa15.98■□□□□ 0.15
PHGDH-233ENST00000642021 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.98■□□□□ 0.151e-14■□□□□ 11
PHGDH-233ENST00000642021 WWC3Q9ULE0 1092 aa15.98■□□□□ 0.15
PHGDH-233ENST00000642021 ZNF532Q9HCE3 1301 aa15.98■□□□□ 0.15
PHGDH-233ENST00000642021 SLU7O95391 586 aaKnown RBP15.98■□□□□ 0.15
PHGDH-233ENST00000642021 VGLL2Q8N8G2 317 aa15.98■□□□□ 0.15
PHGDH-233ENST00000642021 TACC3Q9Y6A5 838 aa15.98■□□□□ 0.15
PHGDH-233ENST00000642021 MORC2Q9Y6X9 1032 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-233ENST00000642021 IKBKBO14920 756 aa15.98■□□□□ 0.15
PHGDH-233ENST00000642021 PHKA1P46020 1223 aa15.98■□□□□ 0.15
PHGDH-233ENST00000642021 GOLGA8FQ08AF8 430 aa15.98■□□□□ 0.15
PHGDH-233ENST00000642021 GOLGA8DPQ0D2H9 430 aa15.98■□□□□ 0.15
PHGDH-233ENST00000642021 LONRF3Q496Y0 759 aa15.98■□□□□ 0.15
PHGDH-233ENST00000642021 TIGD1Q96MW7 591 aa15.98■□□□□ 0.15
PHGDH-233ENST00000642021 METTL16Q86W50 562 aaKnown RBP15.97■□□□□ 0.15
PHGDH-233ENST00000642021 ZNF397Q8NF99 534 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-233ENST00000642021 STRN4Q9NRL3 753 aa15.97■□□□□ 0.15
PHGDH-233ENST00000642021 CNNM1Q9NRU3 951 aa15.97■□□□□ 0.15
PHGDH-233ENST00000642021 PSDA5PKW4 1024 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-233ENST00000642021 FOXN1O15353 648 aa15.97■□□□□ 0.15
PHGDH-233ENST00000642021 PPP6R2O75170 966 aa15.97■□□□□ 0.15
PHGDH-233ENST00000642021 SPECC1Q5M775 1068 aa15.97■□□□□ 0.15
PHGDH-233ENST00000642021 KIF6Q6ZMV9 814 aa15.97■□□□□ 0.15
PHGDH-233ENST00000642021 NLRP10Q86W26 655 aa15.97■□□□□ 0.15
PHGDH-233ENST00000642021 L2HGDHQ9H9P8 463 aa15.97■□□□□ 0.15
PHGDH-233ENST00000642021 ABCC12Q96J65 1359 aa15.96■□□□□ 0.15
PHGDH-233ENST00000642021 PDE6AP16499 860 aa15.96■□□□□ 0.15
PHGDH-233ENST00000642021 BMP6P22004 513 aa15.96■□□□□ 0.15
PHGDH-233ENST00000642021 UBASH3AP57075 661 aa15.96■□□□□ 0.15
PHGDH-233ENST00000642021 CCDC102BQ68D86 513 aa15.96■□□□□ 0.15
PHGDH-233ENST00000642021 GIGYF2Q6Y7W6 1299 aaKnown RBP15.96■□□□□ 0.15
PHGDH-233ENST00000642021 HELBQ8NG08 1087 aaPredicted RBP15.96■□□□□ 0.15
PHGDH-233ENST00000642021 PIGBQ92521 554 aa15.96■□□□□ 0.15
PHGDH-233ENST00000642021 LY9Q9HBG7 655 aa15.96■□□□□ 0.15
PHGDH-233ENST00000642021 TMOD3Q9NYL9 352 aa15.96■□□□□ 0.15
PHGDH-233ENST00000642021 TCRBV5S4A2TA0A5A2 114 aa15.96■□□□□ 0.15
PHGDH-233ENST00000642021 TMEM232C9JQI7 657 aa15.96■□□□□ 0.15
PHGDH-233ENST00000642021 SNAP23O00161 211 aa15.96■□□□□ 0.15
PHGDH-233ENST00000642021 TPM4P67936 248 aa15.96■□□□□ 0.15
PHGDH-233ENST00000642021 GNL2Q13823 731 aaKnown RBP15.96■□□□□ 0.15
PHGDH-233ENST00000642021 UBE3CQ15386 1083 aa15.96■□□□□ 0.15
PHGDH-233ENST00000642021 ERCC6LQ2NKX8 1250 aa15.96■□□□□ 0.15
PHGDH-233ENST00000642021 CCDC93Q567U6 631 aa15.96■□□□□ 0.15
PHGDH-233ENST00000642021 RESP18Q5W5W9 173 aa15.96■□□□□ 0.15
PHGDH-233ENST00000642021 STRBPQ96SI9 672 aaKnown RBP15.96■□□□□ 0.15
PHGDH-233ENST00000642021 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.96■□□□□ 0.15
PHGDH-233ENST00000642021 UBN2Q6ZU65 1347 aa15.96■□□□□ 0.14
PHGDH-233ENST00000642021 C4AP0C0L4 1744 aa15.95■□□□□ 0.14
PHGDH-233ENST00000642021 C4BP0C0L5 1744 aa15.95■□□□□ 0.14
PHGDH-233ENST00000642021 KIF2AO00139 706 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-233ENST00000642021 ZBTB43O43298 467 aa15.95■□□□□ 0.14
PHGDH-233ENST00000642021 IARSP41252 1262 aaKnown RBP15.95■□□□□ 0.14
PHGDH-233ENST00000642021 PDE4BQ07343 736 aa15.95■□□□□ 0.14
PHGDH-233ENST00000642021 FANCLQ9NW38 375 aa15.95■□□□□ 0.14
PHGDH-233ENST00000642021 PCDHA5Q9Y5H7 936 aa15.95■□□□□ 0.14
PHGDH-233ENST00000642021 FAM237AA0A1B0GTK4 181 aa15.95■□□□□ 0.14
PHGDH-233ENST00000642021 FANCGO15287 622 aa15.95■□□□□ 0.14
PHGDH-233ENST00000642021 PDE8BO95263 885 aa15.95■□□□□ 0.14
PHGDH-233ENST00000642021 GUCY1A2P33402 732 aa15.95■□□□□ 0.14
PHGDH-233ENST00000642021 MYL5Q02045 173 aa15.95■□□□□ 0.14
PHGDH-233ENST00000642021 CTDSPL2Q05D32 466 aa15.95■□□□□ 0.14
PHGDH-233ENST00000642021 HSP90AA4PQ58FG1 418 aa15.95■□□□□ 0.14
PHGDH-233ENST00000642021 NFXL1Q6ZNB6 911 aa15.95■□□□□ 0.14
PHGDH-233ENST00000642021 BRINP3Q76B58 766 aa15.95■□□□□ 0.14
PHGDH-233ENST00000642021 CARD10Q9BWT7 1032 aa15.95■□□□□ 0.14
PHGDH-233ENST00000642021 ZSWIM5Q9P217 1185 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms