RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 ARHGEF40Q8TER5 1519 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 IFT172Q9UG01 1749 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 TCHHQ07283 1943 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 ST20-MTHFSA0A0A6YYL1 179 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 NUTM2FA1L443 756 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 TMEM221A6NGB7 291 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 SRRM3A6NNA2 597 aaPredicted RBP2.17□□□□□ -2.06
TCF4-264ENST00000628391 BECN2A8MW95 431 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 TMEM232C9JQI7 657 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 SLC27A2O14975 620 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 FIBPO43427 364 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 TIMM44O43615 452 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 SMARCA5O60264 1052 aaPredicted RBP2.17□□□□□ -2.06
TCF4-264ENST00000628391 MGRN1O60291 552 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 BUB1BO60566 1050 aaPredicted RBP2.17□□□□□ -2.06
TCF4-264ENST00000628391 SKAP2O75563 359 aaPredicted RBP2.17□□□□□ -2.06
TCF4-264ENST00000628391 ZNF189O75820 626 aaPredicted RBP2.17□□□□□ -2.06
TCF4-264ENST00000628391 KRT38O76015 456 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 URI1O94763 535 aaPredicted RBP2.17□□□□□ -2.06
TCF4-264ENST00000628391 TPPPO94811 219 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 NPTXRO95502 500 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 F13A1P00488 732 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 VIMP08670 466 aaKnown RBP2.17□□□□□ -2.06
TCF4-264ENST00000628391 CCDC175P0C221 793 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 ZSCAN22P10073 491 aaPredicted RBP2.17□□□□□ -2.06
TCF4-264ENST00000628391 GNAT1P11488 350 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 IDO1P14902 403 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 SFPQP23246 707 aaKnown RBP eCLIP2.17□□□□□ -2.06
TCF4-264ENST00000628391 ALDH3A1P30838 453 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 PSMC4P43686 418 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 AMPHP49418 695 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 RHBDL3P58872 404 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 NLRP5P59047 1200 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 CHMP4BP1P59074 171 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 PHEXP78562 749 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 ATP2B2Q01814 1243 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 ADCY1Q08828 1119 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 FOXD4Q12950 439 aaPredicted RBP2.17□□□□□ -2.06
TCF4-264ENST00000628391 MKRN4PQ13434 485 aaPredicted RBP2.17□□□□□ -2.06
TCF4-264ENST00000628391 CUL4BQ13620 913 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 BLMHQ13867 455 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 TUBB2AQ13885 445 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 CASP8Q14790 479 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 ENOX2Q16206 610 aaKnown RBP2.17□□□□□ -2.06
TCF4-264ENST00000628391 STX1AQ16623 288 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 CLPPQ16740 277 aaPredicted RBP2.17□□□□□ -2.06
TCF4-264ENST00000628391 WHAMMP3Q1A5X7 153 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 USH1GQ495M9 461 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 ANO6Q4KMQ2 910 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 ZNF394Q53GI3 561 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 TTC22Q5TAA0 569 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 THEMIS2Q5TEJ8 643 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 ARMC3Q5W041 872 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 E4F1Q66K89 784 aaPredicted RBP2.17□□□□□ -2.06
TCF4-264ENST00000628391 PRPF40BQ6NWY9 871 aaKnown RBP2.17□□□□□ -2.06
TCF4-264ENST00000628391 GIMAP6Q6P9H5 292 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 OLFML1Q6UWY5 402 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 SEPT14Q6ZU15 432 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 ARMC9Q7Z3E5 817 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 PABPN1Q86U42 306 aaKnown RBP eCLIP2.17□□□□□ -2.06
TCF4-264ENST00000628391 RSPH3Q86UC2 560 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 SESTD1Q86VW0 696 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 CEP57Q86XR8 500 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 HOMER1Q86YM7 354 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 ITPRIPQ8IWB1 547 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 CCDC65Q8IXS2 484 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 CCDC13Q8IYE1 715 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 STAG2Q8N3U4 1231 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 CCDC155Q8N6L0 562 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 TEX9Q8N6V9 391 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 RASSF8Q8NHQ8 419 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 SMARCC2Q8TAQ2 1214 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 WDR66Q8TBY9 1149 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 BCAS4Q8TDM0 211 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 WHAMMQ8TF30 809 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 CNKSR1Q969H4 720 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 DHRS1Q96LJ7 313 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 TRAPPC9Q96Q05 1148 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 IWS1Q96ST2 819 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 RUFY1Q96T51 708 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 NAP1L3Q99457 506 aaPredicted RBP2.17□□□□□ -2.06
TCF4-264ENST00000628391 PHF23Q9BUL5 403 aaPredicted RBP2.17□□□□□ -2.06
TCF4-264ENST00000628391 TUBB2BQ9BVA1 445 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 MOV10L1Q9BXT6 1211 aaKnown RBP2.17□□□□□ -2.06
TCF4-264ENST00000628391 PHACTR1Q9C0D0 580 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 LNPKQ9C0E8 428 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 YIPF3Q9GZM5 350 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 NACA2Q9H009 215 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 NAT10Q9H0A0 1025 aaKnown RBP2.17□□□□□ -2.06
TCF4-264ENST00000628391 CLSTN2Q9H4D0 955 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 PLEKHA4Q9H4M7 779 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 NRDE2Q9H7Z3 1164 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 TMEM165Q9HC07 324 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 SLC40A1Q9NP59 571 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 LUC7LQ9NQ29 371 aaKnown RBP2.17□□□□□ -2.06
TCF4-264ENST00000628391 ZNHIT6Q9NWK9 470 aaKnown RBP2.17□□□□□ -2.06
TCF4-264ENST00000628391 TRMT1Q9NXH9 659 aaKnown RBP2.17□□□□□ -2.06
TCF4-264ENST00000628391 QPCTLQ9NXS2 382 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 ZFATQ9P243 1243 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 MYO1AQ9UBC5 1043 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms