RNA–Protein interactions for RNA: ENST00000590934.1

TMC6-217, Transcript of transmembrane channel like 6, humanhuman

TSL 5

Gene TMC6, Length 386 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-217ENST00000590934 PKP1Q13835 747 aa13.75□□□□□ -0.21
TMC6-217ENST00000590934 ARHGAP27Q6ZUM4 889 aa13.75□□□□□ -0.21
TMC6-217ENST00000590934 RALYLQ86SE5 291 aaKnown RBP13.75□□□□□ -0.21
TMC6-217ENST00000590934 C2CD5Q86YS7 1000 aa13.75□□□□□ -0.21
TMC6-217ENST00000590934 MIGA1Q8NAN2 632 aa13.75□□□□□ -0.21
TMC6-217ENST00000590934 GTF3C6Q969F1 213 aa13.75□□□□□ -0.21
TMC6-217ENST00000590934 LARP6Q9BRS8 491 aaKnown RBP13.75□□□□□ -0.21
TMC6-217ENST00000590934 COA1Q9GZY4 146 aa13.75□□□□□ -0.21
TMC6-217ENST00000590934 ANAPC4Q9UJX5 808 aa13.75□□□□□ -0.21
TMC6-217ENST00000590934 SMC3Q9UQE7 1217 aa13.75□□□□□ -0.21
TMC6-217ENST00000590934 COL11A2P13942 1736 aaPredicted RBP13.75□□□□□ -0.21
TMC6-217ENST00000590934 C10orf71Q711Q0 1435 aa13.74□□□□□ -0.21
TMC6-217ENST00000590934 WDR33Q9C0J8 1336 aaKnown RBP13.74□□□□□ -0.21
TMC6-217ENST00000590934 H0YIN7 160 aa13.74□□□□□ -0.21
TMC6-217ENST00000590934 PRKAB2O43741 272 aa13.74□□□□□ -0.21
TMC6-217ENST00000590934 PFKFB2O60825 505 aa13.74□□□□□ -0.21
TMC6-217ENST00000590934 DPEP1P16444 411 aa13.74□□□□□ -0.21
TMC6-217ENST00000590934 GSTO1P78417 241 aa13.74□□□□□ -0.21
TMC6-217ENST00000590934 CERS3Q8IU89 383 aa13.74□□□□□ -0.21
TMC6-217ENST00000590934 STAG1Q8WVM7 1258 aa13.74□□□□□ -0.21
TMC6-217ENST00000590934 BRF1Q92994 677 aa13.74□□□□□ -0.21
TMC6-217ENST00000590934 CHMP4CQ96CF2 233 aa13.74□□□□□ -0.21
TMC6-217ENST00000590934 ZNF274Q96GC6 653 aaPredicted RBP13.74□□□□□ -0.21
TMC6-217ENST00000590934 LLPHQ9BRT6 129 aaKnown RBP13.74□□□□□ -0.21
TMC6-217ENST00000590934 CNNM2Q9H8M5 875 aa13.74□□□□□ -0.21
TMC6-217ENST00000590934 PRC1O43663 620 aa13.73□□□□□ -0.21
TMC6-217ENST00000590934 LDHBP07195 334 aaKnown RBP13.73□□□□□ -0.21
TMC6-217ENST00000590934 TDO2P48775 406 aa13.73□□□□□ -0.21
TMC6-217ENST00000590934 ANTXR2P58335 489 aa13.73□□□□□ -0.21
TMC6-217ENST00000590934 TGFB2P61812 414 aa13.73□□□□□ -0.21
TMC6-217ENST00000590934 TRDNQ13061 729 aa13.73□□□□□ -0.21
TMC6-217ENST00000590934 DZIP1Q86YF9 867 aaKnown RBP13.73□□□□□ -0.21
TMC6-217ENST00000590934 MPNDQ8N594 471 aa13.73□□□□□ -0.21
TMC6-217ENST00000590934 NECAB1Q8N987 351 aa13.73□□□□□ -0.21
TMC6-217ENST00000590934 TBC1D22AQ8WUA7 517 aa13.73□□□□□ -0.21
TMC6-217ENST00000590934 GPR101Q96P66 508 aaPredicted RBP13.73□□□□□ -0.21
TMC6-217ENST00000590934 MTA3Q9BTC8 594 aa13.73□□□□□ -0.21
TMC6-217ENST00000590934 BRCA1P38398 1863 aaKnown RBP13.73□□□□□ -0.21
TMC6-217ENST00000590934 LAMA4Q16363 1823 aa13.72□□□□□ -0.21
TMC6-217ENST00000590934 C6orf229H3BNL8 230 aa13.72□□□□□ -0.21
TMC6-217ENST00000590934 BAG4O95429 457 aaKnown RBP13.72□□□□□ -0.21
TMC6-217ENST00000590934 PCP11498 1178 aaKnown RBP13.72□□□□□ -0.21
TMC6-217ENST00000590934 PPP4CP60510 307 aa13.72□□□□□ -0.21
TMC6-217ENST00000590934 FGD1P98174 961 aa13.72□□□□□ -0.21
TMC6-217ENST00000590934 AKNAD1Q5T1N1 836 aa13.72□□□□□ -0.21
TMC6-217ENST00000590934 DPP8Q6V1X1 898 aaPredicted RBP13.72□□□□□ -0.21
TMC6-217ENST00000590934 CNKSR1Q969H4 720 aa13.72□□□□□ -0.21
TMC6-217ENST00000590934 RTFDC1Q9BY42 306 aaPredicted RBP13.72□□□□□ -0.21
TMC6-217ENST00000590934 CRNKL1Q9BZJ0 848 aaKnown RBP13.72□□□□□ -0.21
TMC6-217ENST00000590934 KRT23Q9C075 422 aa13.72□□□□□ -0.21
TMC6-217ENST00000590934 TMX4Q9H1E5 349 aaPredicted RBP13.72□□□□□ -0.21
TMC6-217ENST00000590934 RNF41Q9H4P4 317 aaPredicted RBP13.72□□□□□ -0.21
TMC6-217ENST00000590934 NMRK2Q9NPI5 230 aa13.72□□□□□ -0.21
TMC6-217ENST00000590934 ATP8A2Q9NTI2 1148 aa13.72□□□□□ -0.21
TMC6-217ENST00000590934 SUGT1Q9Y2Z0 365 aa13.72□□□□□ -0.21
TMC6-217ENST00000590934 NEDD4P46934 1319 aa13.71□□□□□ -0.21
TMC6-217ENST00000590934 LDHCP07864 332 aa13.71□□□□□ -0.21
TMC6-217ENST00000590934 KCNA3P22001 575 aa13.71□□□□□ -0.21
TMC6-217ENST00000590934 GJB2P29033 226 aa13.71□□□□□ -0.21
TMC6-217ENST00000590934 NT5C2P49902 561 aa13.71□□□□□ -0.21
TMC6-217ENST00000590934 DYNLL1P63167 89 aaKnown RBP13.71□□□□□ -0.21
TMC6-217ENST00000590934 PPARAQ07869 468 aa13.71□□□□□ -0.21
TMC6-217ENST00000590934 CC2D2BQ6DHV5 1058 aa13.71□□□□□ -0.21
TMC6-217ENST00000590934 C7orf43Q8WVR3 580 aa13.71□□□□□ -0.21
TMC6-217ENST00000590934 FAM163AQ96GL9 167 aaPredicted RBP13.71□□□□□ -0.21
TMC6-217ENST00000590934 TMEM87BQ96K49 555 aa13.71□□□□□ -0.21
TMC6-217ENST00000590934 EYA3Q99504 573 aa13.71□□□□□ -0.21
TMC6-217ENST00000590934 LRRC2Q9BYS8 371 aa13.71□□□□□ -0.21
TMC6-217ENST00000590934 SNED1Q8TER0 1413 aa13.71□□□□□ -0.22
TMC6-217ENST00000590934 MYO5AQ9Y4I1 1855 aaKnown RBP13.7□□□□□ -0.22
TMC6-217ENST00000590934 SH2B2O14492 632 aaPredicted RBP13.7□□□□□ -0.22
TMC6-217ENST00000590934 STX6O43752 255 aa13.7□□□□□ -0.22
TMC6-217ENST00000590934 FGRP09769 529 aa13.7□□□□□ -0.22
TMC6-217ENST00000590934 PDCP20941 246 aa13.7□□□□□ -0.22
TMC6-217ENST00000590934 SYT1P21579 422 aa13.7□□□□□ -0.22
TMC6-217ENST00000590934 PDIA3P30101 505 aaKnown RBP13.7□□□□□ -0.22
TMC6-217ENST00000590934 APOBRQ0VD83 1088 aa13.7□□□□□ -0.22
TMC6-217ENST00000590934 SCRN1Q12765 414 aa13.7□□□□□ -0.22
TMC6-217ENST00000590934 GRIPAP1Q4V328 841 aa13.7□□□□□ -0.22
TMC6-217ENST00000590934 SBK1Q52WX2 424 aa13.7□□□□□ -0.22
TMC6-217ENST00000590934 SMARCC2Q8TAQ2 1214 aa13.7□□□□□ -0.22
TMC6-217ENST00000590934 SDR42E1Q8WUS8 393 aa13.7□□□□□ -0.22
TMC6-217ENST00000590934 ZNF622Q969S3 477 aaKnown RBP eCLIP13.7□□□□□ -0.22
TMC6-217ENST00000590934 ZC3H12CQ9C0D7 883 aaKnown RBP13.7□□□□□ -0.22
TMC6-217ENST00000590934 MROH7-TTC4A0A0A0MT08 1334 aa13.69□□□□□ -0.22
TMC6-217ENST00000590934 GAKO14976 1311 aa13.69□□□□□ -0.22
TMC6-217ENST00000590934 GOLGA6L22H0YM25 854 aa13.69□□□□□ -0.22
TMC6-217ENST00000590934 BAG3O95817 575 aa13.69□□□□□ -0.22
TMC6-217ENST00000590934 ZSCAN22P10073 491 aaPredicted RBP13.69□□□□□ -0.22
TMC6-217ENST00000590934 MFSD6Q6ZSS7 791 aa13.69□□□□□ -0.22
TMC6-217ENST00000590934 CYB5R4Q7L1T6 521 aa13.69□□□□□ -0.22
TMC6-217ENST00000590934 CHST3Q7LGC8 479 aa13.69□□□□□ -0.22
TMC6-217ENST00000590934 SGMS1Q86VZ5 419 aa13.69□□□□□ -0.22
TMC6-217ENST00000590934 SLF2Q8IX21 1173 aa13.69□□□□□ -0.22
TMC6-217ENST00000590934 DCP1AQ9NPI6 582 aaPredicted RBP13.69□□□□□ -0.22
TMC6-217ENST00000590934 AATFQ9NY61 560 aaKnown RBP eCLIP13.69□□□□□ -0.223e-7■□□□□ 10.6
TMC6-217ENST00000590934 ARPP21Q9UBL0 812 aaPredicted RBP13.69□□□□□ -0.22
TMC6-217ENST00000590934 MKRN1Q9UHC7 482 aaKnown RBP13.69□□□□□ -0.22
TMC6-217ENST00000590934 ANGEL1Q9UNK9 670 aaKnown RBP13.69□□□□□ -0.22
TMC6-217ENST00000590934 TACC3Q9Y6A5 838 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms