RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 CARD10Q9BWT7 1032 aa8.12□□□□□ -1.11
COPS3-216ENST00000579716 INO80BQ9C086 356 aaPredicted RBP8.12□□□□□ -1.11
COPS3-216ENST00000579716 SRA1Q9HD15 236 aaKnown RBP8.12□□□□□ -1.11
COPS3-216ENST00000579716 MAP3K20Q9NYL2 800 aaKnown RBP8.12□□□□□ -1.11
COPS3-216ENST00000579716 G3BP2Q9UN86 482 aaKnown RBP8.12□□□□□ -1.11
COPS3-216ENST00000579716 TMEM88BA6NKF7 163 aa8.11□□□□□ -1.11
COPS3-216ENST00000579716 TNFRSF10BO14763 440 aa8.11□□□□□ -1.11
COPS3-216ENST00000579716 ATG7O95352 703 aa8.11□□□□□ -1.11
COPS3-216ENST00000579716 RECKO95980 971 aa8.11□□□□□ -1.11
COPS3-216ENST00000579716 GLB1P16278 677 aa8.11□□□□□ -1.11
COPS3-216ENST00000579716 TAL1P17542 331 aaPredicted RBP8.11□□□□□ -1.11
COPS3-216ENST00000579716 MTA1Q13330 715 aa8.11□□□□□ -1.11
COPS3-216ENST00000579716 SAFB2Q14151 953 aaKnown RBP eCLIP8.11□□□□□ -1.11
COPS3-216ENST00000579716 ZRSR2Q15696 482 aaKnown RBP8.11□□□□□ -1.11
COPS3-216ENST00000579716 NBPF6Q5VWK0 638 aa8.11□□□□□ -1.11
COPS3-216ENST00000579716 CCDC174Q6PII3 467 aa8.11□□□□□ -1.11
COPS3-216ENST00000579716 TXNDC11Q6PKC3 985 aa8.11□□□□□ -1.11
COPS3-216ENST00000579716 NLRP13Q86W25 1043 aa8.11□□□□□ -1.11
COPS3-216ENST00000579716 NBPF5PQ86XG9 351 aaPredicted RBP8.11□□□□□ -1.11
COPS3-216ENST00000579716 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.11□□□□□ -1.11
COPS3-216ENST00000579716 OR13H1Q8NG92 308 aa8.11□□□□□ -1.11
COPS3-216ENST00000579716 FAM46AQ96IP4 442 aaKnown RBP8.11□□□□□ -1.11
COPS3-216ENST00000579716 NBPF4Q96M43 638 aa8.11□□□□□ -1.11
COPS3-216ENST00000579716 SYNPO2Q9UMS6 1093 aa8.11□□□□□ -1.11
COPS3-216ENST00000579716 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.11□□□□□ -1.11
COPS3-216ENST00000579716 CBFA2T2O43439 604 aa8.1□□□□□ -1.11
COPS3-216ENST00000579716 GHRHP01286 108 aa8.1□□□□□ -1.11
COPS3-216ENST00000579716 CD53P19397 219 aa8.1□□□□□ -1.11
COPS3-216ENST00000579716 ATP2B1P20020 1258 aa8.1□□□□□ -1.11
COPS3-216ENST00000579716 SPINK2P20155 84 aa8.1□□□□□ -1.11
COPS3-216ENST00000579716 HDLBPQ00341 1268 aaKnown RBP8.1□□□□□ -1.11
COPS3-216ENST00000579716 TCEAL1Q15170 157 aa8.1□□□□□ -1.11
COPS3-216ENST00000579716 GJC2Q5T442 439 aaPredicted RBP8.1□□□□□ -1.11
COPS3-216ENST00000579716 L1TD1Q5T7N2 865 aaKnown RBP8.1□□□□□ -1.11
COPS3-216ENST00000579716 ANKRD23Q86SG2 305 aa8.1□□□□□ -1.11
COPS3-216ENST00000579716 MAP4K3Q8IVH8 894 aa8.1□□□□□ -1.11
COPS3-216ENST00000579716 COL26A1Q96A83 441 aa8.1□□□□□ -1.11
COPS3-216ENST00000579716 STOML1Q9UBI4 398 aa8.1□□□□□ -1.11
COPS3-216ENST00000579716 DDX3YO15523 660 aaKnown RBP8.09□□□□□ -1.11
COPS3-216ENST00000579716 ADAM11O75078 769 aa8.09□□□□□ -1.11
COPS3-216ENST00000579716 GP2P55259 537 aaKnown RBP8.09□□□□□ -1.11
COPS3-216ENST00000579716 SF3B2Q13435 895 aaKnown RBP8.09□□□□□ -1.11
COPS3-216ENST00000579716 NOM1Q5C9Z4 860 aaKnown RBP8.09□□□□□ -1.11
COPS3-216ENST00000579716 FMNL3Q8IVF7 1028 aa8.09□□□□□ -1.11
COPS3-216ENST00000579716 TRIM42Q8IWZ5 723 aa8.09□□□□□ -1.11
COPS3-216ENST00000579716 DRC7Q8IY82 874 aa8.09□□□□□ -1.11
COPS3-216ENST00000579716 PIK3R5Q8WYR1 880 aa8.09□□□□□ -1.11
COPS3-216ENST00000579716 DHX38Q92620 1227 aaKnown RBP8.09□□□□□ -1.11
COPS3-216ENST00000579716 ARMC5Q96C12 935 aa8.09□□□□□ -1.11
COPS3-216ENST00000579716 HMX2A2RU54 273 aa8.08□□□□□ -1.12
COPS3-216ENST00000579716 ZBTB39O15060 712 aa8.08□□□□□ -1.12
COPS3-216ENST00000579716 COBLO75128 1261 aa8.08□□□□□ -1.12
COPS3-216ENST00000579716 HSD3B2P26439 372 aa8.08□□□□□ -1.12
COPS3-216ENST00000579716 EVA1CP58658 441 aa8.08□□□□□ -1.12
COPS3-216ENST00000579716 POU5F1BQ06416 359 aa8.08□□□□□ -1.12
COPS3-216ENST00000579716 TSNAXIP1Q2TAA8 658 aa8.08□□□□□ -1.12
COPS3-216ENST00000579716 RPAINQ86UA6 219 aa8.08□□□□□ -1.12
COPS3-216ENST00000579716 NLGN1Q8N2Q7 840 aa8.08□□□□□ -1.12
COPS3-216ENST00000579716 FAM200AQ8TCP9 573 aa8.08□□□□□ -1.12
COPS3-216ENST00000579716 C7orf69Q9H7B7 122 aa8.08□□□□□ -1.12
COPS3-216ENST00000579716 PCDH12Q9NPG4 1184 aa8.08□□□□□ -1.12
COPS3-216ENST00000579716 PRKAG2Q9UGJ0 569 aa8.08□□□□□ -1.12
COPS3-216ENST00000579716 SFMBT1Q9UHJ3 866 aa8.08□□□□□ -1.12
COPS3-216ENST00000579716 CYP2E1P05181 493 aaPredicted RBP8.07□□□□□ -1.12
COPS3-216ENST00000579716 CD68P34810 354 aaPredicted RBP8.07□□□□□ -1.12
COPS3-216ENST00000579716 GTF2F1P35269 517 aaKnown RBP eCLIP8.07□□□□□ -1.12
COPS3-216ENST00000579716 NFIAQ12857 509 aa8.07□□□□□ -1.12
COPS3-216ENST00000579716 NT5DC4Q86YG4 428 aa8.07□□□□□ -1.12
COPS3-216ENST00000579716 LSM14AQ8ND56 463 aaKnown RBP8.07□□□□□ -1.12
COPS3-216ENST00000579716 ATL2Q8NHH9 583 aa8.07□□□□□ -1.12
COPS3-216ENST00000579716 CDC5LQ99459 802 aaKnown RBP8.07□□□□□ -1.12
COPS3-216ENST00000579716 LACRTQ9GZZ8 138 aa8.07□□□□□ -1.12
COPS3-216ENST00000579716 RASSF4Q9H2L5 321 aa8.07□□□□□ -1.12
COPS3-216ENST00000579716 IFT122Q9HBG6 1241 aa8.07□□□□□ -1.12
COPS3-216ENST00000579716 ANAPC4Q9UJX5 808 aa8.07□□□□□ -1.12
COPS3-216ENST00000579716 ZMIZ1Q9ULJ6 1067 aa8.07□□□□□ -1.12
COPS3-216ENST00000579716 ANKRD33BA6NCL7 494 aa8.06□□□□□ -1.12
COPS3-216ENST00000579716 HSP90AB1P08238 724 aaKnown RBP8.06□□□□□ -1.12
COPS3-216ENST00000579716 PEX19P40855 299 aa8.06□□□□□ -1.12
COPS3-216ENST00000579716 CALD1Q05682 793 aaKnown RBP8.06□□□□□ -1.12
COPS3-216ENST00000579716 EFCAB2Q5VUJ9 269 aa8.06□□□□□ -1.12
COPS3-216ENST00000579716 IL17RAQ96F46 866 aa8.06□□□□□ -1.12
COPS3-216ENST00000579716 MUC3BQ9H195 1237 aa8.06□□□□□ -1.12
COPS3-216ENST00000579716 ZSWIM4Q9H7M6 989 aa8.06□□□□□ -1.12
COPS3-216ENST00000579716 SH2B1Q9NRF2 756 aaPredicted RBP8.06□□□□□ -1.12
COPS3-216ENST00000579716 DDX56Q9NY93 547 aaKnown RBP8.06□□□□□ -1.12
COPS3-216ENST00000579716 ARID1BQ8NFD5 2236 aaPredicted RBP8.05□□□□□ -1.12
COPS3-216ENST00000579716 DHX15O43143 795 aaKnown RBP8.05□□□□□ -1.12
COPS3-216ENST00000579716 PAX4O43316 350 aa8.05□□□□□ -1.12
COPS3-216ENST00000579716 TIMM44O43615 452 aa8.05□□□□□ -1.12
COPS3-216ENST00000579716 PRMT3O60678 531 aa8.05□□□□□ -1.12
COPS3-216ENST00000579716 EPHA1P21709 976 aa8.05□□□□□ -1.12
COPS3-216ENST00000579716 CDC25BP30305 580 aa8.05□□□□□ -1.12
COPS3-216ENST00000579716 IRAK1P51617 712 aa8.05□□□□□ -1.12
COPS3-216ENST00000579716 UBE4AQ14139 1066 aa8.05□□□□□ -1.12
COPS3-216ENST00000579716 DHX8Q14562 1220 aaKnown RBP8.05□□□□□ -1.12
COPS3-216ENST00000579716 CEP135Q66GS9 1140 aa8.05□□□□□ -1.12
COPS3-216ENST00000579716 RNF43Q68DV7 783 aa8.05□□□□□ -1.12
COPS3-216ENST00000579716 DTX1Q86Y01 620 aa8.05□□□□□ -1.12
COPS3-216ENST00000579716 KLHDC7BQ96G42 594 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms