RNA–Protein interactions for RNA: ENST00000568310.1

DNAAF4-CCPG1-202, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2

Gene DNAAF4-CCPG1, Length 1,293 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-202ENST00000568310 NXPE4Q6UWF7 544 aa12.32□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 NBPF11Q86T75 865 aa12.32□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 FAM95CA0A1B0GW59 222 aa12.31□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 PDE3AQ14432 1141 aa12.31□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 AKAP4Q5JQC9 854 aa12.31□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 FBF1Q8TES7 1133 aa12.31□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 FBLIM1Q8WUP2 373 aa12.31□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 SSTR4P31391 388 aa12.3□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 SHKBP1Q8TBC3 707 aa12.3□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 YIPF2Q9BWQ6 316 aa12.3□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 GPN3Q9UHW5 284 aaPredicted RBP12.3□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 ACTL7BQ9Y614 415 aa12.3□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 CD97P48960 835 aa12.29□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 PPP2R3AQ06190 1150 aa12.29□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 NFKBIBQ15653 356 aa12.29□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 PAOXQ6QHF9 649 aa12.29□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 MFSD14AQ96MC6 490 aa12.29□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 TMEM39AQ9NV64 488 aa12.29□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 PCMTD2Q9NV79 361 aa12.29□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 AOC2O75106 756 aa12.28□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 COBLO75128 1261 aa12.28□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 DYMQ7RTS9 669 aa12.28□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 EZH1Q92800 747 aaPredicted RBP12.28□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 AP4E1Q9UPM8 1137 aa12.28□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 AKAP2Q9Y2D5 859 aa12.28□□□□□ -0.44
DNAAF4-CCPG1-202ENST00000568310 PRR19A6NJB7 356 aa12.27□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 ALG1LQ6GMV1 187 aa12.27□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 WDR18Q9BV38 432 aa12.27□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 TOPBP1Q92547 1522 aa12.27□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 WDR64B1ANS9 1081 aa12.26□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 GRIK1P39086 918 aa12.26□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 SETDB2Q96T68 719 aa12.26□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 ZC3H12CQ9C0D7 883 aaKnown RBP12.26□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 SYNGAP1Q96PV0 1343 aa12.26□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 ZNF608Q9ULD9 1512 aaPredicted RBP12.26□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 ATP2B2Q01814 1243 aa12.25□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 FBXL6Q8N531 539 aa12.25□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 GIMAP7Q8NHV1 300 aa12.25□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 SRCIN1Q9C0H9 1055 aa12.25□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 CCDC86Q9H6F5 360 aaKnown RBP12.25□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 FAM105AQ9NUU6 356 aa12.25□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 WWC3Q9ULE0 1092 aa12.25□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 IFT140Q96RY7 1462 aa12.25□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 MED26O95402 600 aa12.24□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 GSTP1P09211 210 aaKnown RBP12.24□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 PDIA4P13667 645 aaKnown RBP12.24□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 LIG1P18858 919 aa12.24□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 RAB6AP20340 208 aa12.24□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 INTS5Q6P9B9 1019 aaKnown RBP12.24□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 GSX1Q9H4S2 264 aaPredicted RBP12.24□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.23□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 GSTT1P30711 240 aa12.23□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 ASPAP45381 313 aa12.23□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 AEBP1Q8IUX7 1158 aa12.23□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 C3orf58Q8NDZ4 430 aa12.23□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 WDR89Q96FK6 387 aaPredicted RBP12.23□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 OSBPL7Q9BZF2 842 aa12.23□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 ATG3Q9NT62 314 aa12.23□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 GIPC1O14908 333 aa12.22□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 F13BP05160 661 aa12.22□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 NFICP08651 508 aa12.22□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 HNRNPUQ00839 825 aaKnown RBP eCLIP12.22□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 MAP7Q14244 749 aa12.22□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 ACSS3Q9H6R3 686 aa12.22□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 KRT82Q9NSB4 513 aa12.22□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 PPP1R9AQ9ULJ8 1098 aa12.22□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 ABCC8Q09428 1581 aa12.22□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 KIAA1324LA8MWY0 1029 aaPredicted RBP12.21□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 P4HBP07237 508 aaKnown RBP12.21□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 SLFN14P0C7P3 912 aa12.21□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 SULF2Q8IWU5 870 aa12.21□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 SEMA6CQ9H3T2 930 aa12.21□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 PRKAG2Q9UGJ0 569 aa12.21□□□□□ -0.45
DNAAF4-CCPG1-202ENST00000568310 ZNF862O60290 1169 aa12.2□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 PDZD3Q86UT5 571 aa12.2□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 KCNB2Q92953 911 aa12.2□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 TBC1D32Q96NH3 1257 aa12.2□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 OSBPL1AQ9BXW6 950 aa12.2□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 PIM2Q9P1W9 311 aa12.2□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 SPG7Q9UQ90 795 aa12.2□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 DNMBPQ6XZF7 1577 aa12.2□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 TMPRSS2O15393 492 aa12.19□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 ARNTP27540 789 aa12.19□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 KIF4BQ2VIQ3 1234 aa12.19□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 ZAR1Q86SH2 424 aa12.19□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 STK35Q8TDR2 534 aa12.19□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 LDHBP07195 334 aaKnown RBP12.18□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 NME2P22392 152 aa12.18□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 ADMP35318 185 aa12.18□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 CPSF6Q16630 551 aaKnown RBP eCLIP12.18□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 SND1Q7KZF4 910 aaKnown RBP eCLIP12.18□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 SHISA5Q8N114 240 aa12.18□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 NECAB3Q96P71 396 aaPredicted RBP12.18□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 CRIM1Q9NZV1 1036 aa12.18□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 LEMD3Q9Y2U8 911 aa12.18□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 ID3Q02535 119 aa12.17□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 METTL22Q9BUU2 404 aaPredicted RBP12.17□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 EMILIN2Q9BXX0 1053 aa12.17□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 CEP44Q9C0F1 390 aa12.17□□□□□ -0.46
DNAAF4-CCPG1-202ENST00000568310 PPM1HQ9ULR3 514 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms