RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 PLEKHM2Q8IWE5 1019 aa13.8□□□□□ -0.2
CALCOCO1-208ENST00000547988 EDC3Q96F86 508 aaKnown RBP13.8□□□□□ -0.2
CALCOCO1-208ENST00000547988 TDRD3Q9H7E2 651 aaKnown RBP13.8□□□□□ -0.2
CALCOCO1-208ENST00000547988 PPP4R2Q9NY27 417 aa13.8□□□□□ -0.2
CALCOCO1-208ENST00000547988 TMOD2Q9NZR1 351 aa13.8□□□□□ -0.2
CALCOCO1-208ENST00000547988 ZNF70Q9UC06 446 aaPredicted RBP13.8□□□□□ -0.2
CALCOCO1-208ENST00000547988 DDX60LQ5H9U9 1706 aaKnown RBP13.8□□□□□ -0.2
CALCOCO1-208ENST00000547988 PAPPA2Q9BXP8 1791 aa13.79□□□□□ -0.2
CALCOCO1-208ENST00000547988 GPR75-ASB3A0A0A6YYF3 556 aa13.79□□□□□ -0.2
CALCOCO1-208ENST00000547988 CLRN2A0PK11 232 aa13.79□□□□□ -0.2
CALCOCO1-208ENST00000547988 MAP4K4O95819 1239 aaPredicted RBP13.79□□□□□ -0.2
CALCOCO1-208ENST00000547988 C1QTNF8P60827 252 aa13.79□□□□□ -0.2
CALCOCO1-208ENST00000547988 FKBP1CQ5VVH2 108 aa13.79□□□□□ -0.2
CALCOCO1-208ENST00000547988 MAGEB6Q8N7X4 407 aa13.79□□□□□ -0.2
CALCOCO1-208ENST00000547988 NOL10Q9BSC4 688 aaKnown RBP13.79□□□□□ -0.2
CALCOCO1-208ENST00000547988 GLIS2Q9BZE0 524 aaPredicted RBP13.79□□□□□ -0.2
CALCOCO1-208ENST00000547988 PPP2R3BQ9Y5P8 575 aa13.79□□□□□ -0.2
CALCOCO1-208ENST00000547988 OTOFQ9HC10 1997 aa13.79□□□□□ -0.2
CALCOCO1-208ENST00000547988 PASKQ96RG2 1323 aa13.79□□□□□ -0.2
CALCOCO1-208ENST00000547988 LAMB1P07942 1786 aa13.78□□□□□ -0.2
CALCOCO1-208ENST00000547988 BAG3O95817 575 aa13.78□□□□□ -0.2
CALCOCO1-208ENST00000547988 PDE6AP16499 860 aa13.78□□□□□ -0.2
CALCOCO1-208ENST00000547988 PLCG2P16885 1265 aa13.78□□□□□ -0.2
CALCOCO1-208ENST00000547988 CYP7A1P22680 504 aa13.78□□□□□ -0.2
CALCOCO1-208ENST00000547988 PDE4AP27815 886 aa13.78□□□□□ -0.2
CALCOCO1-208ENST00000547988 BTDP43251 543 aa13.78□□□□□ -0.2
CALCOCO1-208ENST00000547988 TNNI2P48788 182 aa13.78□□□□□ -0.2
CALCOCO1-208ENST00000547988 SLC9C2Q5TAH2 1124 aa13.78□□□□□ -0.2
CALCOCO1-208ENST00000547988 ZSCAN25Q6NSZ9 544 aa13.78□□□□□ -0.2
CALCOCO1-208ENST00000547988 CDC42EP5Q6NZY7 148 aa13.78□□□□□ -0.2
CALCOCO1-208ENST00000547988 USP48Q86UV5 1035 aa13.78□□□□□ -0.2
CALCOCO1-208ENST00000547988 CERS3Q8IU89 383 aa13.78□□□□□ -0.2
CALCOCO1-208ENST00000547988 KBTBD3Q8NAB2 608 aa13.78□□□□□ -0.2
CALCOCO1-208ENST00000547988 VEZTQ9HBM0 779 aa13.78□□□□□ -0.2
CALCOCO1-208ENST00000547988 ADM5C9JUS6 153 aa13.77□□□□□ -0.21
CALCOCO1-208ENST00000547988 SIPA1L1O43166 1804 aa13.77□□□□□ -0.21
CALCOCO1-208ENST00000547988 PPP4CP60510 307 aa13.77□□□□□ -0.21
CALCOCO1-208ENST00000547988 RFX7Q2KHR2 1363 aa13.77□□□□□ -0.21
CALCOCO1-208ENST00000547988 LRRFIP1Q32MZ4 808 aaKnown RBP13.77□□□□□ -0.21
CALCOCO1-208ENST00000547988 ADGRA1Q86SQ6 560 aa13.77□□□□□ -0.21
CALCOCO1-208ENST00000547988 EVI5LQ96CN4 794 aa13.77□□□□□ -0.21
CALCOCO1-208ENST00000547988 ATAD5Q96QE3 1844 aa13.77□□□□□ -0.21
CALCOCO1-208ENST00000547988 RPAP1Q9BWH6 1393 aaPredicted RBP13.77□□□□□ -0.21
CALCOCO1-208ENST00000547988 USP40Q9NVE5 1235 aa13.77□□□□□ -0.21
CALCOCO1-208ENST00000547988 ZNF532Q9HCE3 1301 aa13.76□□□□□ -0.21
CALCOCO1-208ENST00000547988 TCRBV5S4A2TA0A5A2 114 aa13.76□□□□□ -0.21
CALCOCO1-208ENST00000547988 ZFYP08048 801 aaPredicted RBP13.76□□□□□ -0.21
CALCOCO1-208ENST00000547988 ADD2P35612 726 aa13.76□□□□□ -0.21
CALCOCO1-208ENST00000547988 UBE3CQ15386 1083 aa13.76□□□□□ -0.21
CALCOCO1-208ENST00000547988 FAM83AQ86UY5 434 aa13.76□□□□□ -0.21
CALCOCO1-208ENST00000547988 TICAM2Q86XR7 235 aa13.76□□□□□ -0.21
CALCOCO1-208ENST00000547988 IDI2Q9BXS1 227 aa13.76□□□□□ -0.21
CALCOCO1-208ENST00000547988 DEFB129Q9H1M3 183 aa13.76□□□□□ -0.21
CALCOCO1-208ENST00000547988 AATFQ9NY61 560 aaKnown RBP eCLIP13.76□□□□□ -0.21
CALCOCO1-208ENST00000547988 COL2A1P02458 1487 aaPredicted RBP13.75□□□□□ -0.21
CALCOCO1-208ENST00000547988 CNTNAP1P78357 1384 aa13.75□□□□□ -0.21
CALCOCO1-208ENST00000547988 TCP10L2B9ZVM9 353 aa13.75□□□□□ -0.21
CALCOCO1-208ENST00000547988 TRAF5O00463 557 aa13.75□□□□□ -0.21
CALCOCO1-208ENST00000547988 RHBDL3P58872 404 aa13.75□□□□□ -0.21
CALCOCO1-208ENST00000547988 RASA3Q14644 834 aa13.75□□□□□ -0.21
CALCOCO1-208ENST00000547988 CDCA5Q96FF9 252 aa13.75□□□□□ -0.21
CALCOCO1-208ENST00000547988 FSD1Q9BTV5 496 aa13.75□□□□□ -0.21
CALCOCO1-208ENST00000547988 ENTPD3O75355 529 aa13.74□□□□□ -0.21
CALCOCO1-208ENST00000547988 NPM3O75607 178 aaKnown RBP13.74□□□□□ -0.21
CALCOCO1-208ENST00000547988 APLP1P51693 650 aa13.74□□□□□ -0.21
CALCOCO1-208ENST00000547988 CACNB3P54284 484 aa13.74□□□□□ -0.21
CALCOCO1-208ENST00000547988 MIGA1Q8NAN2 632 aa13.74□□□□□ -0.21
CALCOCO1-208ENST00000547988 SCAF8Q9UPN6 1271 aaKnown RBP13.74□□□□□ -0.21
CALCOCO1-208ENST00000547988 MAGEB6P1A0A0J9YX57 407 aa13.73□□□□□ -0.21
CALCOCO1-208ENST00000547988 TRIM6-TRIM34B2RNG4 842 aa13.73□□□□□ -0.21
CALCOCO1-208ENST00000547988 RNF113AO15541 343 aaKnown RBP13.73□□□□□ -0.21
CALCOCO1-208ENST00000547988 WDHD1O75717 1129 aaPredicted RBP13.73□□□□□ -0.21
CALCOCO1-208ENST00000547988 NF2P35240 595 aa13.73□□□□□ -0.21
CALCOCO1-208ENST00000547988 NFIAQ12857 509 aa13.73□□□□□ -0.21
CALCOCO1-208ENST00000547988 TTC22Q5TAA0 569 aa13.73□□□□□ -0.21
CALCOCO1-208ENST00000547988 TEX11Q8IYF3 940 aa13.73□□□□□ -0.21
CALCOCO1-208ENST00000547988 SH3RF3Q8TEJ3 882 aaPredicted RBP13.73□□□□□ -0.21
CALCOCO1-208ENST00000547988 FAM151AQ8WW52 585 aa13.73□□□□□ -0.21
CALCOCO1-208ENST00000547988 APPBP2Q92624 585 aa13.73□□□□□ -0.21
CALCOCO1-208ENST00000547988 RIOK1Q9BRS2 568 aaKnown RBP13.73□□□□□ -0.21
CALCOCO1-208ENST00000547988 FAM198AQ9UFP1 575 aa13.73□□□□□ -0.21
CALCOCO1-208ENST00000547988 SSC5DA1L4H1 1573 aa13.73□□□□□ -0.21
CALCOCO1-208ENST00000547988 DOCK1Q14185 1865 aa13.73□□□□□ -0.21
CALCOCO1-208ENST00000547988 TMEM88BA6NKF7 163 aa13.72□□□□□ -0.21
CALCOCO1-208ENST00000547988 CELF2O95319 508 aaKnown RBP13.72□□□□□ -0.21
CALCOCO1-208ENST00000547988 HSPA6P17066 643 aa13.72□□□□□ -0.21
CALCOCO1-208ENST00000547988 RGS3P49796 1198 aa13.72□□□□□ -0.21
CALCOCO1-208ENST00000547988 DYNLL1P63167 89 aaKnown RBP13.72□□□□□ -0.21
CALCOCO1-208ENST00000547988 FMR1Q06787 632 aaKnown RBP eCLIP13.72□□□□□ -0.21
CALCOCO1-208ENST00000547988 SUPT20HL1Q3ZLR7 823 aa13.72□□□□□ -0.21
CALCOCO1-208ENST00000547988 RILPL2Q969X0 211 aa13.72□□□□□ -0.21
CALCOCO1-208ENST00000547988 TEPSINQ96N21 525 aa13.72□□□□□ -0.21
CALCOCO1-208ENST00000547988 TMEM39BQ9GZU3 492 aa13.72□□□□□ -0.21
CALCOCO1-208ENST00000547988 ZNF408Q9H9D4 720 aa13.72□□□□□ -0.21
CALCOCO1-208ENST00000547988 ATRNL1Q5VV63 1379 aa13.71□□□□□ -0.21
CALCOCO1-208ENST00000547988 LAMA4Q16363 1823 aa13.71□□□□□ -0.21
CALCOCO1-208ENST00000547988 FKBP1BP68106 108 aa13.71□□□□□ -0.21
CALCOCO1-208ENST00000547988 TCP10Q12799 353 aa13.71□□□□□ -0.21
CALCOCO1-208ENST00000547988 PICALMQ13492 652 aa13.71□□□□□ -0.21
CALCOCO1-208ENST00000547988 CST9Q5W186 159 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms