RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 B4E1Z4 1266 aa18.86■□□□□ 0.61
SPDEF-202ENST00000544425 SH2B2O14492 632 aaPredicted RBP18.86■□□□□ 0.61
SPDEF-202ENST00000544425 CHAF1AQ13111 956 aaPredicted RBP18.86■□□□□ 0.61
SPDEF-202ENST00000544425 CSPP1Q1MSJ5 1256 aa18.86■□□□□ 0.61
SPDEF-202ENST00000544425 L1TD1Q5T7N2 865 aaKnown RBP18.86■□□□□ 0.61
SPDEF-202ENST00000544425 SP8Q8IXZ3 490 aa18.86■□□□□ 0.61
SPDEF-202ENST00000544425 IGDCC4Q8TDY8 1250 aa18.86■□□□□ 0.61
SPDEF-202ENST00000544425 NEDD4P46934 1319 aa18.85■□□□□ 0.61
SPDEF-202ENST00000544425 PTPDC1A2A3K4 754 aa18.85■□□□□ 0.61
SPDEF-202ENST00000544425 GOLGA6L3A6NEY3 463 aa18.85■□□□□ 0.61
SPDEF-202ENST00000544425 LIFRP42702 1097 aa18.85■□□□□ 0.61
SPDEF-202ENST00000544425 CTDSPL2Q05D32 466 aa18.85■□□□□ 0.61
SPDEF-202ENST00000544425 CDC37L1Q7L3B6 337 aa18.85■□□□□ 0.61
SPDEF-202ENST00000544425 SGMS1Q86VZ5 419 aa18.85■□□□□ 0.61
SPDEF-202ENST00000544425 HPS5Q9UPZ3 1129 aa18.85■□□□□ 0.61
SPDEF-202ENST00000544425 CACNA1SQ13698 1873 aa18.85■□□□□ 0.61
SPDEF-202ENST00000544425 NCLP19338 710 aaKnown RBP18.84■□□□□ 0.61
SPDEF-202ENST00000544425 PRDX5P30044 214 aa18.84■□□□□ 0.61
SPDEF-202ENST00000544425 DYNLL1P63167 89 aaKnown RBP18.84■□□□□ 0.61
SPDEF-202ENST00000544425 PPARAQ07869 468 aa18.84■□□□□ 0.61
SPDEF-202ENST00000544425 FOXD4L6Q3SYB3 417 aaPredicted RBP18.84■□□□□ 0.61
SPDEF-202ENST00000544425 FOXD4L3Q6VB84 417 aaPredicted RBP18.84■□□□□ 0.61
SPDEF-202ENST00000544425 ZSWIM5Q9P217 1185 aa18.84■□□□□ 0.61
SPDEF-202ENST00000544425 UFL1O94874 794 aa18.84■□□□□ 0.61
SPDEF-202ENST00000544425 IL1R1P14778 569 aa18.84■□□□□ 0.61
SPDEF-202ENST00000544425 NKX2-3Q8TAU0 364 aa18.84■□□□□ 0.61
SPDEF-202ENST00000544425 SDR42E1Q8WUS8 393 aa18.84■□□□□ 0.61
SPDEF-202ENST00000544425 ZSCAN16Q9H4T2 348 aaPredicted RBP18.84■□□□□ 0.61
SPDEF-202ENST00000544425 NCOA5Q9HCD5 579 aaKnown RBP18.84■□□□□ 0.61
SPDEF-202ENST00000544425 CD209Q9NNX6 404 aa18.84■□□□□ 0.61
SPDEF-202ENST00000544425 NAP1L2Q9ULW6 460 aaPredicted RBP18.84■□□□□ 0.61
SPDEF-202ENST00000544425 CNPY2Q9Y2B0 182 aa18.84■□□□□ 0.61
SPDEF-202ENST00000544425 TACC3Q9Y6A5 838 aa18.84■□□□□ 0.61
SPDEF-202ENST00000544425 PARP3Q9Y6F1 533 aa18.84■□□□□ 0.61
SPDEF-202ENST00000544425 SRGNP10124 158 aa18.83■□□□□ 0.6
SPDEF-202ENST00000544425 PCP11498 1178 aaKnown RBP18.83■□□□□ 0.6
SPDEF-202ENST00000544425 NPR1P16066 1061 aa18.83■□□□□ 0.6
SPDEF-202ENST00000544425 PDE6BP35913 854 aa18.83■□□□□ 0.6
SPDEF-202ENST00000544425 SLC51AQ86UW1 340 aa18.83■□□□□ 0.6
SPDEF-202ENST00000544425 RGS22Q8NE09 1264 aa18.83■□□□□ 0.6
SPDEF-202ENST00000544425 TBC1D16Q8TBP0 767 aa18.83■□□□□ 0.6
SPDEF-202ENST00000544425 DDX11Q96FC9 970 aa18.83■□□□□ 0.6
SPDEF-202ENST00000544425 TIAM2Q8IVF5 1701 aa18.82■□□□□ 0.6
SPDEF-202ENST00000544425 GOLGA8BA8MQT2 603 aa18.82■□□□□ 0.6
SPDEF-202ENST00000544425 ALDH1B1P30837 517 aa18.82■□□□□ 0.6
SPDEF-202ENST00000544425 DNM1Q05193 864 aaKnown RBP18.82■□□□□ 0.6
SPDEF-202ENST00000544425 INCENPQ9NQS7 918 aa18.82■□□□□ 0.6
SPDEF-202ENST00000544425 ATP8A2Q9NTI2 1148 aa18.82■□□□□ 0.6
SPDEF-202ENST00000544425 ATP6V0A2Q9Y487 856 aa18.82■□□□□ 0.6
SPDEF-202ENST00000544425 H3BQV1 296 aa18.82■□□□□ 0.6
SPDEF-202ENST00000544425 PPEF1O14829 653 aaPredicted RBP18.82■□□□□ 0.6
SPDEF-202ENST00000544425 KDM4AO75164 1064 aa18.82■□□□□ 0.6
SPDEF-202ENST00000544425 LDHBP07195 334 aaKnown RBP18.82■□□□□ 0.6
SPDEF-202ENST00000544425 MMP10P09238 476 aa18.82■□□□□ 0.6
SPDEF-202ENST00000544425 FGRP09769 529 aa18.82■□□□□ 0.6
SPDEF-202ENST00000544425 ZNF445P59923 1031 aa18.82■□□□□ 0.6
SPDEF-202ENST00000544425 GSTO1P78417 241 aa18.82■□□□□ 0.6
SPDEF-202ENST00000544425 IFFO2Q5TF58 517 aa18.82■□□□□ 0.6
SPDEF-202ENST00000544425 CAVIN1Q6NZI2 390 aaKnown RBP18.82■□□□□ 0.6
SPDEF-202ENST00000544425 CRNKL1Q9BZJ0 848 aaKnown RBP18.82■□□□□ 0.6
SPDEF-202ENST00000544425 LY9Q9HBG7 655 aa18.82■□□□□ 0.6
SPDEF-202ENST00000544425 GDPD2Q9HCC8 539 aa18.82■□□□□ 0.6
SPDEF-202ENST00000544425 POLLQ9UGP5 575 aa18.82■□□□□ 0.6
SPDEF-202ENST00000544425 UBE2HP62256 183 aa18.81■□□□□ 0.6
SPDEF-202ENST00000544425 KRT85P78386 507 aa18.81■□□□□ 0.6
SPDEF-202ENST00000544425 DZIP1Q86YF9 867 aaKnown RBP18.81■□□□□ 0.6
SPDEF-202ENST00000544425 TMTC2Q8N394 836 aa18.81■□□□□ 0.6
SPDEF-202ENST00000544425 NRXN2Q9P2S2 1712 aa18.81■□□□□ 0.6
SPDEF-202ENST00000544425 FDPSP14324 419 aaKnown RBP18.8■□□□□ 0.6
SPDEF-202ENST00000544425 TMEM67Q5HYA8 995 aa18.8■□□□□ 0.6
SPDEF-202ENST00000544425 APOA5Q6Q788 366 aa18.8■□□□□ 0.6
SPDEF-202ENST00000544425 AATFQ9NY61 560 aaKnown RBP eCLIP18.8■□□□□ 0.6
SPDEF-202ENST00000544425 RGPD3A6NKT7 1758 aaPredicted RBP18.8■□□□□ 0.6
SPDEF-202ENST00000544425 RGPD4Q7Z3J3 1758 aa18.8■□□□□ 0.6
SPDEF-202ENST00000544425 MINDY4BA8MYZ0 360 aa18.8■□□□□ 0.6
SPDEF-202ENST00000544425 IFIT3O14879 490 aaKnown RBP18.8■□□□□ 0.6
SPDEF-202ENST00000544425 GADD45BO75293 160 aaPredicted RBP18.8■□□□□ 0.6
SPDEF-202ENST00000544425 LDHCP07864 332 aa18.8■□□□□ 0.6
SPDEF-202ENST00000544425 PPP4CP60510 307 aa18.8■□□□□ 0.6
SPDEF-202ENST00000544425 RESTQ13127 1097 aa18.8■□□□□ 0.6
SPDEF-202ENST00000544425 SART3Q15020 963 aaKnown RBP18.8■□□□□ 0.6
SPDEF-202ENST00000544425 ZSCAN23Q3MJ62 389 aa18.8■□□□□ 0.6
SPDEF-202ENST00000544425 FERMT3Q86UX7 667 aa18.8■□□□□ 0.6
SPDEF-202ENST00000544425 CAMKK2Q96RR4 588 aa18.8■□□□□ 0.6
SPDEF-202ENST00000544425 MRE11P49959 708 aa18.79■□□□□ 0.6
SPDEF-202ENST00000544425 SBK1Q52WX2 424 aa18.79■□□□□ 0.6
SPDEF-202ENST00000544425 CTR9Q6PD62 1173 aa18.79■□□□□ 0.6
SPDEF-202ENST00000544425 CERS3Q8IU89 383 aa18.79■□□□□ 0.6
SPDEF-202ENST00000544425 ESR2Q92731 530 aa18.79■□□□□ 0.6
SPDEF-202ENST00000544425 MASTLQ96GX5 879 aa18.79■□□□□ 0.6
SPDEF-202ENST00000544425 DCP1AQ9NPI6 582 aaPredicted RBP18.79■□□□□ 0.6
SPDEF-202ENST00000544425 ELP1O95163 1332 aa18.79■□□□□ 0.6
SPDEF-202ENST00000544425 CPLX1O14810 134 aa18.78■□□□□ 0.6
SPDEF-202ENST00000544425 METAP2P50579 478 aaKnown RBP eCLIP18.78■□□□□ 0.6
SPDEF-202ENST00000544425 SLC15A2Q16348 729 aa18.78■□□□□ 0.6
SPDEF-202ENST00000544425 GPR101Q96P66 508 aaPredicted RBP18.78■□□□□ 0.6
SPDEF-202ENST00000544425 SCAND2PQ9GZW5 306 aaPredicted RBP18.78■□□□□ 0.6
SPDEF-202ENST00000544425 ZBTB43O43298 467 aa18.77■□□□□ 0.6
SPDEF-202ENST00000544425 CDKL5O76039 1030 aa18.77■□□□□ 0.6
SPDEF-202ENST00000544425 RCAN1P53805 252 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms