RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 SMARCC2Q8TAQ2 1214 aa12.9□□□□□ -0.34
SRPRA-205ENST00000531104 LLPHQ9BRT6 129 aaKnown RBP12.9□□□□□ -0.34
SRPRA-205ENST00000531104 MTA3Q9BTC8 594 aa12.9□□□□□ -0.34
SRPRA-205ENST00000531104 NEDD4P46934 1319 aa12.89□□□□□ -0.35
SRPRA-205ENST00000531104 C10orf71Q711Q0 1435 aa12.89□□□□□ -0.35
SRPRA-205ENST00000531104 LDHBP07195 334 aaKnown RBP12.89□□□□□ -0.35
SRPRA-205ENST00000531104 FGRP09769 529 aa12.89□□□□□ -0.35
SRPRA-205ENST00000531104 SYT1P21579 422 aa12.89□□□□□ -0.35
SRPRA-205ENST00000531104 PDIA3P30101 505 aaKnown RBP12.89□□□□□ -0.35
SRPRA-205ENST00000531104 PPP4CP60510 307 aa12.89□□□□□ -0.35
SRPRA-205ENST00000531104 APOBRQ0VD83 1088 aa12.89□□□□□ -0.35
SRPRA-205ENST00000531104 SCRN1Q12765 414 aa12.89□□□□□ -0.35
SRPRA-205ENST00000531104 GRIK5Q16478 980 aa12.89□□□□□ -0.35
SRPRA-205ENST00000531104 CYB5R4Q7L1T6 521 aa12.89□□□□□ -0.35
SRPRA-205ENST00000531104 RALYLQ86SE5 291 aaKnown RBP12.89□□□□□ -0.35
SRPRA-205ENST00000531104 CCDC125Q86Z20 511 aa12.89□□□□□ -0.35
SRPRA-205ENST00000531104 MPNDQ8N594 471 aa12.89□□□□□ -0.35
SRPRA-205ENST00000531104 SLC16A10Q8TF71 515 aa12.89□□□□□ -0.35
SRPRA-205ENST00000531104 C7orf43Q8WVR3 580 aa12.89□□□□□ -0.35
SRPRA-205ENST00000531104 FAM163AQ96GL9 167 aaPredicted RBP12.89□□□□□ -0.35
SRPRA-205ENST00000531104 COA1Q9GZY4 146 aa12.89□□□□□ -0.35
SRPRA-205ENST00000531104 CNNM2Q9H8M5 875 aa12.89□□□□□ -0.35
SRPRA-205ENST00000531104 CHD4Q14839 1912 aa12.89□□□□□ -0.35
SRPRA-205ENST00000531104 DLEC1Q9Y238 1755 aa12.89□□□□□ -0.35
SRPRA-205ENST00000531104 H0YIN7 160 aa12.88□□□□□ -0.35
SRPRA-205ENST00000531104 C6orf229H3BNL8 230 aa12.88□□□□□ -0.35
SRPRA-205ENST00000531104 SH2B2O14492 632 aaPredicted RBP12.88□□□□□ -0.35
SRPRA-205ENST00000531104 STX6O43752 255 aa12.88□□□□□ -0.35
SRPRA-205ENST00000531104 CTDNEP1O95476 244 aa12.88□□□□□ -0.35
SRPRA-205ENST00000531104 ZSCAN22P10073 491 aaPredicted RBP12.88□□□□□ -0.35
SRPRA-205ENST00000531104 TDO2P48775 406 aa12.88□□□□□ -0.35
SRPRA-205ENST00000531104 GSTO1P78417 241 aa12.88□□□□□ -0.35
SRPRA-205ENST00000531104 CTDSPL2Q05D32 466 aa12.88□□□□□ -0.35
SRPRA-205ENST00000531104 PPARAQ07869 468 aa12.88□□□□□ -0.35
SRPRA-205ENST00000531104 TRDNQ13061 729 aa12.88□□□□□ -0.35
SRPRA-205ENST00000531104 SBK1Q52WX2 424 aa12.88□□□□□ -0.35
SRPRA-205ENST00000531104 CHST3Q7LGC8 479 aa12.88□□□□□ -0.35
SRPRA-205ENST00000531104 IGDCC4Q8TDY8 1250 aa12.88□□□□□ -0.35
SRPRA-205ENST00000531104 TBC1D22AQ8WUA7 517 aa12.88□□□□□ -0.35
SRPRA-205ENST00000531104 SDR42E1Q8WUS8 393 aa12.88□□□□□ -0.35
SRPRA-205ENST00000531104 CHMP4CQ96CF2 233 aa12.88□□□□□ -0.35
SRPRA-205ENST00000531104 TMEM87BQ96K49 555 aa12.88□□□□□ -0.35
SRPRA-205ENST00000531104 RTFDC1Q9BY42 306 aaPredicted RBP12.88□□□□□ -0.35
SRPRA-205ENST00000531104 KRT23Q9C075 422 aa12.88□□□□□ -0.35
SRPRA-205ENST00000531104 GPHNQ9NQX3 736 aaPredicted RBP12.88□□□□□ -0.35
SRPRA-205ENST00000531104 ATP8A2Q9NTI2 1148 aa12.88□□□□□ -0.35
SRPRA-205ENST00000531104 MKRN1Q9UHC7 482 aaKnown RBP12.88□□□□□ -0.35
SRPRA-205ENST00000531104 MTMR6Q9Y217 621 aa12.88□□□□□ -0.35
SRPRA-205ENST00000531104 LAMB1P07942 1786 aa12.87□□□□□ -0.35
SRPRA-205ENST00000531104 B4E1Z4 1266 aa12.87□□□□□ -0.35
SRPRA-205ENST00000531104 LDHCP07864 332 aa12.87□□□□□ -0.35
SRPRA-205ENST00000531104 PCP11498 1178 aaKnown RBP12.87□□□□□ -0.35
SRPRA-205ENST00000531104 STK3Q13188 491 aa12.87□□□□□ -0.35
SRPRA-205ENST00000531104 CTR9Q6PD62 1173 aa12.87□□□□□ -0.35
SRPRA-205ENST00000531104 DZIP1Q86YF9 867 aaKnown RBP12.87□□□□□ -0.35
SRPRA-205ENST00000531104 NSUN7Q8NE18 718 aaKnown RBP12.87□□□□□ -0.35
SRPRA-205ENST00000531104 CNKSR1Q969H4 720 aa12.87□□□□□ -0.35
SRPRA-205ENST00000531104 CRNKL1Q9BZJ0 848 aaKnown RBP12.87□□□□□ -0.35
SRPRA-205ENST00000531104 PDGFDQ9GZP0 370 aaPredicted RBP12.87□□□□□ -0.35
SRPRA-205ENST00000531104 RNF41Q9H4P4 317 aaPredicted RBP12.87□□□□□ -0.35
SRPRA-205ENST00000531104 BRPF3Q9ULD4 1205 aa12.87□□□□□ -0.35
SRPRA-205ENST00000531104 HPS5Q9UPZ3 1129 aa12.87□□□□□ -0.35
SRPRA-205ENST00000531104 JAG2Q9Y219 1238 aa12.87□□□□□ -0.35
SRPRA-205ENST00000531104 SUGT1Q9Y2Z0 365 aa12.87□□□□□ -0.35
SRPRA-205ENST00000531104 SLX4Q8IY92 1834 aa12.87□□□□□ -0.35
SRPRA-205ENST00000531104 MROH7-TTC4A0A0A0MT08 1334 aa12.87□□□□□ -0.35
SRPRA-205ENST00000531104 KIF13BQ9NQT8 1826 aa12.86□□□□□ -0.35
SRPRA-205ENST00000531104 NID2Q14112 1375 aa12.86□□□□□ -0.35
SRPRA-205ENST00000531104 TRAK2O60296 914 aa12.86□□□□□ -0.35
SRPRA-205ENST00000531104 PDCP20941 246 aa12.86□□□□□ -0.35
SRPRA-205ENST00000531104 LIFRP42702 1097 aa12.86□□□□□ -0.35
SRPRA-205ENST00000531104 FGD1P98174 961 aa12.86□□□□□ -0.35
SRPRA-205ENST00000531104 OLFM4Q6UX06 510 aa12.86□□□□□ -0.35
SRPRA-205ENST00000531104 DPP8Q6V1X1 898 aaPredicted RBP12.86□□□□□ -0.35
SRPRA-205ENST00000531104 MFSD6Q6ZSS7 791 aa12.86□□□□□ -0.35
SRPRA-205ENST00000531104 SGMS1Q86VZ5 419 aa12.86□□□□□ -0.35
SRPRA-205ENST00000531104 CERS3Q8IU89 383 aa12.86□□□□□ -0.35
SRPRA-205ENST00000531104 ZNF622Q969S3 477 aaKnown RBP eCLIP12.86□□□□□ -0.351e-7■□□□□ 8.8
SRPRA-205ENST00000531104 DCP1AQ9NPI6 582 aaPredicted RBP12.86□□□□□ -0.35
SRPRA-205ENST00000531104 INCENPQ9NQS7 918 aa12.86□□□□□ -0.35
SRPRA-205ENST00000531104 LMBRD1Q9NUN5 540 aa12.86□□□□□ -0.35
SRPRA-205ENST00000531104 AATFQ9NY61 560 aaKnown RBP eCLIP12.86□□□□□ -0.35
SRPRA-205ENST00000531104 ZSWIM5Q9P217 1185 aa12.86□□□□□ -0.35
SRPRA-205ENST00000531104 ANGEL1Q9UNK9 670 aaKnown RBP12.86□□□□□ -0.35
SRPRA-205ENST00000531104 GAKO14976 1311 aa12.86□□□□□ -0.35
SRPRA-205ENST00000531104 ZNF646O15015 1829 aaPredicted RBP12.85□□□□□ -0.35
SRPRA-205ENST00000531104 GPR75-ASB3A0A0A6YYF3 556 aa12.85□□□□□ -0.35
SRPRA-205ENST00000531104 JAK2O60674 1132 aa12.85□□□□□ -0.35
SRPRA-205ENST00000531104 F13A1P00488 732 aa12.85□□□□□ -0.35
SRPRA-205ENST00000531104 CHRNA5P30532 468 aa12.85□□□□□ -0.35
SRPRA-205ENST00000531104 SKOR2Q2VWA4 1001 aaPredicted RBP12.85□□□□□ -0.35
SRPRA-205ENST00000531104 EYA3Q99504 573 aa12.85□□□□□ -0.35
SRPRA-205ENST00000531104 ZC3H12CQ9C0D7 883 aaKnown RBP12.85□□□□□ -0.35
SRPRA-205ENST00000531104 LY9Q9HBG7 655 aa12.85□□□□□ -0.35
SRPRA-205ENST00000531104 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.85□□□□□ -0.35
SRPRA-205ENST00000531104 KLF18A0A0U1RQI7 1052 aa12.84□□□□□ -0.35
SRPRA-205ENST00000531104 GOLGA6L22H0YM25 854 aa12.84□□□□□ -0.35
SRPRA-205ENST00000531104 ORC4O43929 436 aa12.84□□□□□ -0.35
SRPRA-205ENST00000531104 KDM4AO75164 1064 aa12.84□□□□□ -0.35
SRPRA-205ENST00000531104 NT5C2P49902 561 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms