RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 FSIP1Q8NA03 581 aa17.87■□□□□ 0.45
USH1C-207ENST00000527720 LY9Q9HBG7 655 aa17.87■□□□□ 0.45
USH1C-207ENST00000527720 ZBTB43O43298 467 aa17.87■□□□□ 0.45
USH1C-207ENST00000527720 STK38Q15208 465 aa17.87■□□□□ 0.45
USH1C-207ENST00000527720 SF3B3Q15393 1217 aaKnown RBP17.87■□□□□ 0.45
USH1C-207ENST00000527720 SYNE3Q6ZMZ3 975 aa17.87■□□□□ 0.45
USH1C-207ENST00000527720 DENND2AQ9ULE3 1009 aa17.87■□□□□ 0.45
USH1C-207ENST00000527720 ZNF804BA4D1E1 1349 aa17.87■□□□□ 0.45
USH1C-207ENST00000527720 MYH13Q9UKX3 1938 aa17.86■□□□□ 0.45
USH1C-207ENST00000527720 STAG1Q8WVM7 1258 aa17.86■□□□□ 0.45
USH1C-207ENST00000527720 DNAJC25Q9H1X3 360 aa17.86■□□□□ 0.45
USH1C-207ENST00000527720 ARMT1Q9H993 441 aa17.86■□□□□ 0.45
USH1C-207ENST00000527720 STK36Q9NRP7 1315 aa17.86■□□□□ 0.45
USH1C-207ENST00000527720 SNAP23O00161 211 aa17.86■□□□□ 0.45
USH1C-207ENST00000527720 UBE4AQ14139 1066 aa17.86■□□□□ 0.45
USH1C-207ENST00000527720 TMEM67Q5HYA8 995 aa17.86■□□□□ 0.45
USH1C-207ENST00000527720 OTUD7BQ6GQQ9 843 aa17.86■□□□□ 0.45
USH1C-207ENST00000527720 MFSD6Q6ZSS7 791 aa17.86■□□□□ 0.45
USH1C-207ENST00000527720 FMR1NBQ8N0W7 255 aaPredicted RBP17.86■□□□□ 0.45
USH1C-207ENST00000527720 GNL3LQ9NVN8 582 aaKnown RBP17.86■□□□□ 0.45
USH1C-207ENST00000527720 CNTNAP4Q9C0A0 1308 aa17.85■□□□□ 0.45
USH1C-207ENST00000527720 NUTM2BA6NNL0 878 aaPredicted RBP17.85■□□□□ 0.45
USH1C-207ENST00000527720 NUTM2EB1AL46 878 aaPredicted RBP17.85■□□□□ 0.45
USH1C-207ENST00000527720 SPTLC2O15270 562 aa17.85■□□□□ 0.45
USH1C-207ENST00000527720 SF3A1Q15459 793 aaKnown RBP17.85■□□□□ 0.45
USH1C-207ENST00000527720 NUTM2AQ8IVF1 878 aaPredicted RBP17.85■□□□□ 0.45
USH1C-207ENST00000527720 ANKRD18AQ8IVF6 992 aa17.85■□□□□ 0.45
USH1C-207ENST00000527720 ALG1Q9BT22 464 aa17.85■□□□□ 0.45
USH1C-207ENST00000527720 TTC12Q9H892 705 aaPredicted RBP17.85■□□□□ 0.45
USH1C-207ENST00000527720 ZSWIM5Q9P217 1185 aa17.85■□□□□ 0.45
USH1C-207ENST00000527720 TAF1P21675 1872 aa17.85■□□□□ 0.45
USH1C-207ENST00000527720 COL24A1Q17RW2 1714 aa17.85■□□□□ 0.45
USH1C-207ENST00000527720 POLR3DP05423 398 aaPredicted RBP17.84■□□□□ 0.45
USH1C-207ENST00000527720 NTRK3Q16288 839 aa17.84■□□□□ 0.45
USH1C-207ENST00000527720 NFXL1Q6ZNB6 911 aa17.84■□□□□ 0.45
USH1C-207ENST00000527720 PLA2G4DQ86XP0 818 aa17.84■□□□□ 0.45
USH1C-207ENST00000527720 RAB11FIP4Q86YS3 637 aa17.84■□□□□ 0.45
USH1C-207ENST00000527720 ANO10Q9NW15 660 aa17.84■□□□□ 0.45
USH1C-207ENST00000527720 BSDC1Q9NW68 430 aaPredicted RBP17.84■□□□□ 0.45
USH1C-207ENST00000527720 LRP2BPQ9P2M1 347 aa17.84■□□□□ 0.45
USH1C-207ENST00000527720 CLIC4Q9Y696 253 aa17.84■□□□□ 0.45
USH1C-207ENST00000527720 SLC4A4Q9Y6R1 1079 aa17.84■□□□□ 0.45
USH1C-207ENST00000527720 COL4A1P02462 1669 aa17.84■□□□□ 0.45
USH1C-207ENST00000527720 CACNA1SQ13698 1873 aa17.84■□□□□ 0.45
USH1C-207ENST00000527720 KCNQ2O43526 872 aa17.84■□□□□ 0.45
USH1C-207ENST00000527720 ANO1Q5XXA6 986 aa17.84■□□□□ 0.45
USH1C-207ENST00000527720 LCORLQ8N3X6 602 aa17.84■□□□□ 0.45
USH1C-207ENST00000527720 NKX2-3Q8TAU0 364 aa17.84■□□□□ 0.45
USH1C-207ENST00000527720 RNF41Q9H4P4 317 aaPredicted RBP17.84■□□□□ 0.45
USH1C-207ENST00000527720 GOLGA8AA7E2F4 631 aa17.83■□□□□ 0.45
USH1C-207ENST00000527720 IFIT3O14879 490 aaKnown RBP17.83■□□□□ 0.45
USH1C-207ENST00000527720 CDC27P30260 824 aa17.83■□□□□ 0.45
USH1C-207ENST00000527720 IARSP41252 1262 aaKnown RBP17.83■□□□□ 0.45
USH1C-207ENST00000527720 TDO2P48775 406 aa17.83■□□□□ 0.45
USH1C-207ENST00000527720 RCAN1P53805 252 aa17.83■□□□□ 0.45
USH1C-207ENST00000527720 CTDSPL2Q05D32 466 aa17.83■□□□□ 0.45
USH1C-207ENST00000527720 NOLC1Q14978 699 aaKnown RBP eCLIP17.83■□□□□ 0.45
USH1C-207ENST00000527720 SART3Q15020 963 aaKnown RBP17.83■□□□□ 0.45
USH1C-207ENST00000527720 IQCB1Q15051 598 aa17.83■□□□□ 0.45
USH1C-207ENST00000527720 MICU3Q86XE3 530 aa17.83■□□□□ 0.45
USH1C-207ENST00000527720 TMTC2Q8N394 836 aa17.83■□□□□ 0.45
USH1C-207ENST00000527720 LINC00116Q8NCU8 138 aa17.83■□□□□ 0.45
USH1C-207ENST00000527720 ZNF830Q96NB3 372 aaPredicted RBP17.83■□□□□ 0.45
USH1C-207ENST00000527720 SLC12A7Q9Y666 1083 aa17.83■□□□□ 0.45
USH1C-207ENST00000527720 MYH6P13533 1939 aa17.83■□□□□ 0.45
USH1C-207ENST00000527720 CCDC69A6NI79 296 aa17.83■□□□□ 0.44
USH1C-207ENST00000527720 KIF28PB7ZC32 967 aa17.83■□□□□ 0.44
USH1C-207ENST00000527720 SLC10A5Q5PT55 438 aa17.83■□□□□ 0.44
USH1C-207ENST00000527720 SARM1Q6SZW1 724 aa17.83■□□□□ 0.44
USH1C-207ENST00000527720 WASF1Q92558 559 aa17.83■□□□□ 0.44
USH1C-207ENST00000527720 SPTLC3Q9NUV7 552 aa17.83■□□□□ 0.44
USH1C-207ENST00000527720 R3HCC1Q9Y3T6 440 aaKnown RBP17.83■□□□□ 0.44
USH1C-207ENST00000527720 GOLGA6L19H0YKK7 550 aa17.82■□□□□ 0.44
USH1C-207ENST00000527720 CDC25BP30305 580 aa17.82■□□□□ 0.44
USH1C-207ENST00000527720 ZNF75DP51815 510 aa17.82■□□□□ 0.44
USH1C-207ENST00000527720 ERFEQ4G0M1 354 aa17.82■□□□□ 0.44
USH1C-207ENST00000527720 KRT40Q6A162 431 aa17.82■□□□□ 0.44
USH1C-207ENST00000527720 TRIM29Q14134 588 aa17.82■□□□□ 0.44
USH1C-207ENST00000527720 SLC39A14Q15043 492 aa17.82■□□□□ 0.44
USH1C-207ENST00000527720 TRIM5Q9C035 493 aa17.82■□□□□ 0.44
USH1C-207ENST00000527720 SENP2Q9HC62 589 aa17.82■□□□□ 0.44
USH1C-207ENST00000527720 FAM217BQ9NTX9 383 aaPredicted RBP17.82■□□□□ 0.44
USH1C-207ENST00000527720 U2AF2P26368 475 aaKnown RBP eCLIP17.81■□□□□ 0.44
USH1C-207ENST00000527720 VPS37DQ86XT2 251 aa17.81■□□□□ 0.44
USH1C-207ENST00000527720 ANAPC4Q9UJX5 808 aa17.81■□□□□ 0.44
USH1C-207ENST00000527720 BTAF1O14981 1849 aa17.81■□□□□ 0.44
USH1C-207ENST00000527720 PRKAB2O43741 272 aa17.81■□□□□ 0.44
USH1C-207ENST00000527720 PPP6R2O75170 966 aa17.81■□□□□ 0.44
USH1C-207ENST00000527720 FMNL1O95466 1100 aaPredicted RBP17.81■□□□□ 0.44
USH1C-207ENST00000527720 IFNAR1P17181 557 aa17.81■□□□□ 0.44
USH1C-207ENST00000527720 CYP7A1P22680 504 aa17.81■□□□□ 0.44
USH1C-207ENST00000527720 CMA1P23946 247 aa17.81■□□□□ 0.44
USH1C-207ENST00000527720 SSRP1Q08945 709 aaKnown RBP17.81■□□□□ 0.44
USH1C-207ENST00000527720 CAVIN4Q5BKX8 364 aa17.81■□□□□ 0.44
USH1C-207ENST00000527720 RC3H1Q5TC82 1133 aaKnown RBP17.81■□□□□ 0.44
USH1C-207ENST00000527720 MPNDQ8N594 471 aa17.81■□□□□ 0.44
USH1C-207ENST00000527720 JMYQ8N9B5 988 aa17.81■□□□□ 0.44
USH1C-207ENST00000527720 SPC24Q8NBT2 197 aa17.81■□□□□ 0.44
USH1C-207ENST00000527720 NYXQ9GZU5 481 aa17.81■□□□□ 0.44
USH1C-207ENST00000527720 NAT10Q9H0A0 1025 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms