RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 COL22A1Q8NFW1 1626 aaPredicted RBP12.53□□□□□ -0.4
PTPMT1-204ENST00000527079 TIAM2Q8IVF5 1701 aa12.53□□□□□ -0.4
PTPMT1-204ENST00000527079 DOT1LQ8TEK3 1739 aa12.53□□□□□ -0.4
PTPMT1-204ENST00000527079 B4E1Z4 1266 aa12.53□□□□□ -0.4
PTPMT1-204ENST00000527079 PPP6R2O75170 966 aa12.53□□□□□ -0.4
PTPMT1-204ENST00000527079 GNAT2P19087 354 aa12.53□□□□□ -0.4
PTPMT1-204ENST00000527079 RAB11FIP4Q86YS3 637 aa12.53□□□□□ -0.4
PTPMT1-204ENST00000527079 IFNL3Q8IZI9 196 aa12.53□□□□□ -0.4
PTPMT1-204ENST00000527079 CACTINQ8WUQ7 758 aaKnown RBP12.53□□□□□ -0.4
PTPMT1-204ENST00000527079 UTP14AQ9BVJ6 771 aaKnown RBP12.53□□□□□ -0.4
PTPMT1-204ENST00000527079 KRT23Q9C075 422 aa12.53□□□□□ -0.4
PTPMT1-204ENST00000527079 NAPBQ9H115 298 aa12.53□□□□□ -0.4
PTPMT1-204ENST00000527079 LY9Q9HBG7 655 aa12.53□□□□□ -0.4
PTPMT1-204ENST00000527079 RTL9Q8NET4 1388 aa12.52□□□□□ -0.4
PTPMT1-204ENST00000527079 STK36Q9NRP7 1315 aa12.52□□□□□ -0.4
PTPMT1-204ENST00000527079 ZNF202O95125 648 aa12.52□□□□□ -0.41
PTPMT1-204ENST00000527079 RASGRF1Q13972 1273 aa12.52□□□□□ -0.41
PTPMT1-204ENST00000527079 CCDC144BQ3MJ40 725 aa12.52□□□□□ -0.41
PTPMT1-204ENST00000527079 KRT40Q6A162 431 aa12.52□□□□□ -0.41
PTPMT1-204ENST00000527079 VPS37DQ86XT2 251 aa12.52□□□□□ -0.41
PTPMT1-204ENST00000527079 LRRC8AQ8IWT6 810 aa12.52□□□□□ -0.41
PTPMT1-204ENST00000527079 CCDC144CPQ8IYA2 1237 aa12.52□□□□□ -0.41
PTPMT1-204ENST00000527079 MAGEB6Q8N7X4 407 aa12.52□□□□□ -0.41
PTPMT1-204ENST00000527079 MTA3Q9BTC8 594 aa12.52□□□□□ -0.41
PTPMT1-204ENST00000527079 NID2Q14112 1375 aa12.52□□□□□ -0.41
PTPMT1-204ENST00000527079 NEDD4P46934 1319 aa12.52□□□□□ -0.41
PTPMT1-204ENST00000527079 SLIT2O94813 1529 aa12.52□□□□□ -0.41
PTPMT1-204ENST00000527079 SLC3A2P08195 630 aaKnown RBP12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 IARSP41252 1262 aaKnown RBP12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 TRIM29Q14134 588 aa12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 NTRK3Q16288 839 aa12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 CCDC152Q4G0S7 254 aa12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 TMEM67Q5HYA8 995 aa12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 SUSD4Q5VX71 490 aa12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 NFXL1Q6ZNB6 911 aa12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 AOPEPQ8N6M6 819 aa12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 WASF1Q92558 559 aa12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 GJB4Q9NTQ9 266 aa12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 CCDC87Q9NVE4 849 aa12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 DENND2AQ9ULE3 1009 aa12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 ECM29Q5VYK3 1845 aa12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 RREB1Q92766 1687 aa12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 PNPLA7Q6ZV29 1317 aa12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 COL16A1Q07092 1604 aaPredicted RBP12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 GOLGA8AA7E2F4 631 aa12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 MBD4O95243 580 aa12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 PFKFB1P16118 471 aa12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 U2AF2P26368 475 aaKnown RBP eCLIP12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 CDC27P30260 824 aa12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 GNL2Q13823 731 aaKnown RBP12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 INTS5Q6P9B9 1019 aaKnown RBP12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 MICU3Q86XE3 530 aa12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 HELBQ8NG08 1087 aaPredicted RBP12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 NACAP1Q9BZK3 213 aa12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 LAMB2P55268 1798 aa12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 PHLPP1O60346 1717 aa12.51□□□□□ -0.41
PTPMT1-204ENST00000527079 FAM237AA0A1B0GTK4 181 aa12.5□□□□□ -0.41
PTPMT1-204ENST00000527079 IGHMBP2P38935 993 aaKnown RBP12.5□□□□□ -0.41
PTPMT1-204ENST00000527079 GSDMDP57764 484 aa12.5□□□□□ -0.41
PTPMT1-204ENST00000527079 NLRP12P59046 1061 aa12.5□□□□□ -0.41
PTPMT1-204ENST00000527079 TPM4P67936 248 aa12.5□□□□□ -0.41
PTPMT1-204ENST00000527079 DHX8Q14562 1220 aaKnown RBP12.5□□□□□ -0.41
PTPMT1-204ENST00000527079 AKNAD1Q5T1N1 836 aa12.5□□□□□ -0.41
PTPMT1-204ENST00000527079 EPB41L4AQ9HCS5 686 aaPredicted RBP12.5□□□□□ -0.41
PTPMT1-204ENST00000527079 IMPACTQ9P2X3 320 aa12.5□□□□□ -0.41
PTPMT1-204ENST00000527079 SLC12A7Q9Y666 1083 aa12.5□□□□□ -0.41
PTPMT1-204ENST00000527079 CICQ96RK0 1608 aaPredicted RBP12.5□□□□□ -0.41
PTPMT1-204ENST00000527079 CCDC69A6NI79 296 aa12.5□□□□□ -0.41
PTPMT1-204ENST00000527079 SMTNL1A8MU46 457 aa12.5□□□□□ -0.41
PTPMT1-204ENST00000527079 IFIT3O14879 490 aaKnown RBP12.5□□□□□ -0.41
PTPMT1-204ENST00000527079 MFSD6Q6ZSS7 791 aa12.5□□□□□ -0.41
PTPMT1-204ENST00000527079 NKX2-3Q8TAU0 364 aa12.5□□□□□ -0.41
PTPMT1-204ENST00000527079 STAG1Q8WVM7 1258 aa12.5□□□□□ -0.41
PTPMT1-204ENST00000527079 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.5□□□□□ -0.41
PTPMT1-204ENST00000527079 FAM217BQ9NTX9 383 aaPredicted RBP12.5□□□□□ -0.41
PTPMT1-204ENST00000527079 ZSWIM5Q9P217 1185 aa12.5□□□□□ -0.41
PTPMT1-204ENST00000527079 BCORQ6W2J9 1755 aa12.5□□□□□ -0.41
PTPMT1-204ENST00000527079 GSG1L2A8MUP6 293 aa12.49□□□□□ -0.41
PTPMT1-204ENST00000527079 RIOK3O14730 519 aaKnown RBP12.49□□□□□ -0.41
PTPMT1-204ENST00000527079 WDHD1O75717 1129 aaPredicted RBP12.49□□□□□ -0.41
PTPMT1-204ENST00000527079 FMNL1O95466 1100 aaPredicted RBP12.49□□□□□ -0.41
PTPMT1-204ENST00000527079 IFNAR1P17181 557 aa12.49□□□□□ -0.41
PTPMT1-204ENST00000527079 RCAN1P53805 252 aa12.49□□□□□ -0.41
PTPMT1-204ENST00000527079 SSRP1Q08945 709 aaKnown RBP12.49□□□□□ -0.41
PTPMT1-204ENST00000527079 SART3Q15020 963 aaKnown RBP12.49□□□□□ -0.41
PTPMT1-204ENST00000527079 PTPAQ15257 358 aa12.49□□□□□ -0.41
PTPMT1-204ENST00000527079 DPCR1Q3MIW9 517 aa12.49□□□□□ -0.41
PTPMT1-204ENST00000527079 PHKBQ93100 1093 aa12.49□□□□□ -0.41
PTPMT1-204ENST00000527079 AIFM3Q96NN9 605 aa12.49□□□□□ -0.41
PTPMT1-204ENST00000527079 SENP2Q9HC62 589 aa12.49□□□□□ -0.41
PTPMT1-204ENST00000527079 HPSEQ9Y251 543 aa12.49□□□□□ -0.41
PTPMT1-204ENST00000527079 THRAP3Q9Y2W1 955 aaKnown RBP12.49□□□□□ -0.41
PTPMT1-204ENST00000527079 PAXBP1Q9Y5B6 917 aa12.49□□□□□ -0.41
PTPMT1-204ENST00000527079 CTIFO43310 598 aaKnown RBP12.49□□□□□ -0.41
PTPMT1-204ENST00000527079 RANBP6O60518 1105 aaKnown RBP12.49□□□□□ -0.41
PTPMT1-204ENST00000527079 RXRAP19793 462 aa12.49□□□□□ -0.41
PTPMT1-204ENST00000527079 SYKP43405 635 aa12.49□□□□□ -0.41
PTPMT1-204ENST00000527079 CRKLP46109 303 aaKnown RBP12.49□□□□□ -0.41
PTPMT1-204ENST00000527079 TMTC2Q8N394 836 aa12.49□□□□□ -0.41
PTPMT1-204ENST00000527079 ERCC4Q92889 916 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms