RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 PEG3Q9GZU2 1588 aa6.44□□□□□ -1.38
GPNMB-210ENST00000478451 WRNQ14191 1432 aaPredicted RBP eCLIP6.43□□□□□ -1.38
GPNMB-210ENST00000478451 GSC2O15499 205 aa6.43□□□□□ -1.38
GPNMB-210ENST00000478451 FAAP100Q0VG06 881 aa6.43□□□□□ -1.38
GPNMB-210ENST00000478451 AP3B2Q13367 1082 aa6.43□□□□□ -1.38
GPNMB-210ENST00000478451 NXPE4Q6UWF7 544 aa6.43□□□□□ -1.38
GPNMB-210ENST00000478451 SND1Q7KZF4 910 aaKnown RBP eCLIP6.43□□□□□ -1.38
GPNMB-210ENST00000478451 C12orf50Q8NA57 414 aaPredicted RBP6.43□□□□□ -1.38
GPNMB-210ENST00000478451 SETDB2Q96T68 719 aa6.43□□□□□ -1.38
GPNMB-210ENST00000478451 KCNF1Q9H3M0 494 aa6.43□□□□□ -1.38
GPNMB-210ENST00000478451 C7orf69Q9H7B7 122 aa6.43□□□□□ -1.38
GPNMB-210ENST00000478451 ZFYVE1Q9HBF4 777 aa6.43□□□□□ -1.38
GPNMB-210ENST00000478451 PPP4R2Q9NY27 417 aa6.43□□□□□ -1.38
GPNMB-210ENST00000478451 ECEL1O95672 775 aa6.42□□□□□ -1.38
GPNMB-210ENST00000478451 IGLV1-40P01703 118 aa6.42□□□□□ -1.38
GPNMB-210ENST00000478451 P4HBP07237 508 aaKnown RBP6.42□□□□□ -1.38
GPNMB-210ENST00000478451 XRCC5P13010 732 aaKnown RBP6.42□□□□□ -1.38
GPNMB-210ENST00000478451 ZNF157P51786 506 aaPredicted RBP6.42□□□□□ -1.38
GPNMB-210ENST00000478451 ATP2B2Q01814 1243 aa6.42□□□□□ -1.38
GPNMB-210ENST00000478451 ALG1LQ6GMV1 187 aa6.42□□□□□ -1.38
GPNMB-210ENST00000478451 TRIM42Q8IWZ5 723 aa6.42□□□□□ -1.38
GPNMB-210ENST00000478451 FAM9AQ8IZU1 332 aaPredicted RBP6.42□□□□□ -1.38
GPNMB-210ENST00000478451 GPN3Q9UHW5 284 aaPredicted RBP6.42□□□□□ -1.38
GPNMB-210ENST00000478451 HMX2A2RU54 273 aa6.41□□□□□ -1.38
GPNMB-210ENST00000478451 ADH5P11766 374 aa6.41□□□□□ -1.38
GPNMB-210ENST00000478451 DRD2P14416 443 aa6.41□□□□□ -1.38
GPNMB-210ENST00000478451 MAP4P27816 1152 aaKnown RBP6.41□□□□□ -1.38
GPNMB-210ENST00000478451 SGO2Q562F6 1265 aa6.41□□□□□ -1.38
GPNMB-210ENST00000478451 BEND4Q6ZU67 534 aa6.41□□□□□ -1.38
GPNMB-210ENST00000478451 CLEC10AQ8IUN9 316 aa6.41□□□□□ -1.38
GPNMB-210ENST00000478451 FAM83CQ9BQN1 747 aa6.41□□□□□ -1.38
GPNMB-210ENST00000478451 WWC3Q9ULE0 1092 aa6.41□□□□□ -1.38
GPNMB-210ENST00000478451 CCDC88BA6NC98 1476 aa6.41□□□□□ -1.38
GPNMB-210ENST00000478451 SOX4Q06945 474 aaPredicted RBP6.4□□□□□ -1.38
GPNMB-210ENST00000478451 NFIAQ12857 509 aa6.4□□□□□ -1.38
GPNMB-210ENST00000478451 PDE3AQ14432 1141 aa6.4□□□□□ -1.38
GPNMB-210ENST00000478451 RNF43Q68DV7 783 aa6.4□□□□□ -1.38
GPNMB-210ENST00000478451 C2CD4AQ8NCU7 369 aaPredicted RBP6.4□□□□□ -1.38
GPNMB-210ENST00000478451 AKAP2Q9Y2D5 859 aa6.4□□□□□ -1.38
GPNMB-210ENST00000478451 ABCC8Q09428 1581 aa6.4□□□□□ -1.39
GPNMB-210ENST00000478451 KIF21BO75037 1637 aa6.39□□□□□ -1.39
GPNMB-210ENST00000478451 RXRBP28702 533 aa6.39□□□□□ -1.39
GPNMB-210ENST00000478451 GSTT1P30711 240 aa6.39□□□□□ -1.39
GPNMB-210ENST00000478451 USP11P51784 963 aa6.39□□□□□ -1.39
GPNMB-210ENST00000478451 PPP2R3AQ06190 1150 aa6.39□□□□□ -1.39
GPNMB-210ENST00000478451 AKAP4Q5JQC9 854 aa6.39□□□□□ -1.39
GPNMB-210ENST00000478451 C3orf58Q8NDZ4 430 aa6.39□□□□□ -1.39
GPNMB-210ENST00000478451 DBNDD2Q9BQY9 259 aa6.39□□□□□ -1.39
GPNMB-210ENST00000478451 SRCIN1Q9C0H9 1055 aa6.39□□□□□ -1.39
GPNMB-210ENST00000478451 RAD18Q9NS91 495 aa6.39□□□□□ -1.39
GPNMB-210ENST00000478451 TMEM39AQ9NV64 488 aa6.39□□□□□ -1.39
GPNMB-210ENST00000478451 LDHBP07195 334 aaKnown RBP6.38□□□□□ -1.39
GPNMB-210ENST00000478451 LCE5AQ5TCM9 118 aa6.38□□□□□ -1.39
GPNMB-210ENST00000478451 CDPF1Q6NVV7 123 aa6.38□□□□□ -1.39
GPNMB-210ENST00000478451 WDR18Q9BV38 432 aa6.38□□□□□ -1.39
GPNMB-210ENST00000478451 OSBPL7Q9BZF2 842 aa6.38□□□□□ -1.39
GPNMB-210ENST00000478451 ZC3H12CQ9C0D7 883 aaKnown RBP6.38□□□□□ -1.39
GPNMB-210ENST00000478451 AP4E1Q9UPM8 1137 aa6.38□□□□□ -1.39
GPNMB-210ENST00000478451 SPG7Q9UQ90 795 aa6.38□□□□□ -1.39
GPNMB-210ENST00000478451 ACTL7BQ9Y614 415 aa6.38□□□□□ -1.39
GPNMB-210ENST00000478451 GOLGA3Q08378 1498 aa6.38□□□□□ -1.39
GPNMB-210ENST00000478451 CEP162Q5TB80 1403 aa6.37□□□□□ -1.39
GPNMB-210ENST00000478451 TNIKQ9UKE5 1360 aa6.37□□□□□ -1.39
GPNMB-210ENST00000478451 ANKRD33BA6NCL7 494 aa6.37□□□□□ -1.39
GPNMB-210ENST00000478451 GIPC1O14908 333 aa6.37□□□□□ -1.39
GPNMB-210ENST00000478451 AOC2O75106 756 aa6.37□□□□□ -1.39
GPNMB-210ENST00000478451 C8AP07357 584 aa6.37□□□□□ -1.39
GPNMB-210ENST00000478451 GSTP1P09211 210 aaKnown RBP6.37□□□□□ -1.39
GPNMB-210ENST00000478451 OGFOD2Q6N063 350 aa6.37□□□□□ -1.39
GPNMB-210ENST00000478451 DYMQ7RTS9 669 aa6.37□□□□□ -1.39
GPNMB-210ENST00000478451 ZDHHC13Q8IUH4 622 aa6.37□□□□□ -1.39
GPNMB-210ENST00000478451 SULF2Q8IWU5 870 aa6.37□□□□□ -1.39
GPNMB-210ENST00000478451 POU5F2Q8N7G0 328 aa6.37□□□□□ -1.39
GPNMB-210ENST00000478451 FBLIM1Q8WUP2 373 aa6.37□□□□□ -1.39
GPNMB-210ENST00000478451 YIPF2Q9BWQ6 316 aa6.37□□□□□ -1.39
GPNMB-210ENST00000478451 CCDC86Q9H6F5 360 aaKnown RBP6.37□□□□□ -1.39
GPNMB-210ENST00000478451 C12orf49Q9H741 205 aa6.37□□□□□ -1.39
GPNMB-210ENST00000478451 SYNGAP1Q96PV0 1343 aa6.36□□□□□ -1.39
GPNMB-210ENST00000478451 FAM95CA0A1B0GW59 222 aa6.36□□□□□ -1.39
GPNMB-210ENST00000478451 MED26O95402 600 aa6.36□□□□□ -1.39
GPNMB-210ENST00000478451 TGFB1P01137 390 aa6.36□□□□□ -1.39
GPNMB-210ENST00000478451 LIG1P18858 919 aa6.36□□□□□ -1.39
GPNMB-210ENST00000478451 RAB6AP20340 208 aa6.36□□□□□ -1.39
GPNMB-210ENST00000478451 HNRNPUQ00839 825 aaKnown RBP eCLIP6.36□□□□□ -1.39
GPNMB-210ENST00000478451 TMCO4Q5TGY1 634 aa6.36□□□□□ -1.39
GPNMB-210ENST00000478451 PAOXQ6QHF9 649 aa6.36□□□□□ -1.39
GPNMB-210ENST00000478451 TPTE2Q6XPS3 522 aa6.36□□□□□ -1.39
GPNMB-210ENST00000478451 PPM1HQ9ULR3 514 aa6.36□□□□□ -1.39
GPNMB-210ENST00000478451 BICRAQ9NZM4 1560 aa6.35□□□□□ -1.39
GPNMB-210ENST00000478451 ZNF862O60290 1169 aa6.35□□□□□ -1.39
GPNMB-210ENST00000478451 PRPF40AO75400 957 aaKnown RBP6.35□□□□□ -1.39
GPNMB-210ENST00000478451 USP17L7P0C7H9 530 aa6.35□□□□□ -1.39
GPNMB-210ENST00000478451 RANGAP1P46060 587 aaPredicted RBP6.35□□□□□ -1.39
GPNMB-210ENST00000478451 COL19A1Q14993 1142 aa6.35□□□□□ -1.39
GPNMB-210ENST00000478451 NFKBIBQ15653 356 aa6.35□□□□□ -1.39
GPNMB-210ENST00000478451 FBLN7Q53RD9 439 aa6.35□□□□□ -1.39
GPNMB-210ENST00000478451 PDZD3Q86UT5 571 aa6.35□□□□□ -1.39
GPNMB-210ENST00000478451 SHKBP1Q8TBC3 707 aa6.35□□□□□ -1.39
GPNMB-210ENST00000478451 STK35Q8TDR2 534 aa6.35□□□□□ -1.39
GPNMB-210ENST00000478451 EZH1Q92800 747 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms