RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 PDE6AP16499 860 aa17.46■□□□□ 0.39
CSTF3-202ENST00000431742 FSTL1Q12841 308 aa17.46■□□□□ 0.39
CSTF3-202ENST00000431742 MAP1SQ66K74 1059 aaPredicted RBP17.46■□□□□ 0.39
CSTF3-202ENST00000431742 ADGRA1Q86SQ6 560 aa17.46■□□□□ 0.39
CSTF3-202ENST00000431742 KBTBD3Q8NAB2 608 aa17.46■□□□□ 0.39
CSTF3-202ENST00000431742 NAV1Q8NEY1 1877 aa17.46■□□□□ 0.38
CSTF3-202ENST00000431742 TCRBV5S4A2TA0A5A2 114 aa17.45■□□□□ 0.38
CSTF3-202ENST00000431742 MYO1BO43795 1136 aa17.45■□□□□ 0.38
CSTF3-202ENST00000431742 ITGBL1O95965 494 aaPredicted RBP17.45■□□□□ 0.38
CSTF3-202ENST00000431742 MAGEB6Q8N7X4 407 aa17.45■□□□□ 0.38
CSTF3-202ENST00000431742 TDRD3Q9H7E2 651 aaKnown RBP17.45■□□□□ 0.38
CSTF3-202ENST00000431742 ZNF70Q9UC06 446 aaPredicted RBP17.45■□□□□ 0.38
CSTF3-202ENST00000431742 MYH1P12882 1939 aa17.45■□□□□ 0.38
CSTF3-202ENST00000431742 CLRN2A0PK11 232 aa17.44■□□□□ 0.38
CSTF3-202ENST00000431742 MAP4K4O95819 1239 aaPredicted RBP17.44■□□□□ 0.38
CSTF3-202ENST00000431742 CYP7A1P22680 504 aa17.44■□□□□ 0.38
CSTF3-202ENST00000431742 ADD2P35612 726 aa17.44■□□□□ 0.38
CSTF3-202ENST00000431742 BTDP43251 543 aa17.44■□□□□ 0.38
CSTF3-202ENST00000431742 CDC42EP5Q6NZY7 148 aa17.44■□□□□ 0.38
CSTF3-202ENST00000431742 APOBEC3FQ8IUX4 373 aaKnown RBP17.44■□□□□ 0.38
CSTF3-202ENST00000431742 CNTROBQ8N137 903 aa17.44■□□□□ 0.38
CSTF3-202ENST00000431742 DCPSQ96C86 337 aaKnown RBP17.44■□□□□ 0.38
CSTF3-202ENST00000431742 GLIS2Q9BZE0 524 aaPredicted RBP17.44■□□□□ 0.38
CSTF3-202ENST00000431742 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.44■□□□□ 0.38
CSTF3-202ENST00000431742 PASKQ96RG2 1323 aa17.44■□□□□ 0.38
CSTF3-202ENST00000431742 PAPPA2Q9BXP8 1791 aa17.43■□□□□ 0.38
CSTF3-202ENST00000431742 RHBDL3P58872 404 aa17.43■□□□□ 0.38
CSTF3-202ENST00000431742 PPP4CP60510 307 aa17.43■□□□□ 0.38
CSTF3-202ENST00000431742 SLC9C2Q5TAH2 1124 aa17.43■□□□□ 0.38
CSTF3-202ENST00000431742 FKBP1CQ5VVH2 108 aa17.43■□□□□ 0.38
CSTF3-202ENST00000431742 CDC37L1Q7L3B6 337 aa17.43■□□□□ 0.38
CSTF3-202ENST00000431742 KRT26Q7Z3Y9 468 aa17.43■□□□□ 0.38
CSTF3-202ENST00000431742 ZNF532Q9HCE3 1301 aa17.43■□□□□ 0.38
CSTF3-202ENST00000431742 SIPA1L1O43166 1804 aa17.42■□□□□ 0.38
CSTF3-202ENST00000431742 CNTNAP1P78357 1384 aa17.42■□□□□ 0.38
CSTF3-202ENST00000431742 ADM5C9JUS6 153 aa17.42■□□□□ 0.38
CSTF3-202ENST00000431742 CHGBP05060 677 aa17.42■□□□□ 0.38
CSTF3-202ENST00000431742 UBE3CQ15386 1083 aa17.42■□□□□ 0.38
CSTF3-202ENST00000431742 SULF1Q8IWU6 871 aa17.42■□□□□ 0.38
CSTF3-202ENST00000431742 EVI5LQ96CN4 794 aa17.42■□□□□ 0.38
CSTF3-202ENST00000431742 OTOFQ9HC10 1997 aa17.41■□□□□ 0.38
CSTF3-202ENST00000431742 GSPT1P15170 499 aaKnown RBP17.41■□□□□ 0.38
CSTF3-202ENST00000431742 TTC22Q5TAA0 569 aa17.41■□□□□ 0.38
CSTF3-202ENST00000431742 ZSCAN25Q6NSZ9 544 aa17.41■□□□□ 0.38
CSTF3-202ENST00000431742 USP48Q86UV5 1035 aa17.41■□□□□ 0.38
CSTF3-202ENST00000431742 VEZTQ9HBM0 779 aa17.41■□□□□ 0.38
CSTF3-202ENST00000431742 USP40Q9NVE5 1235 aa17.41■□□□□ 0.38
CSTF3-202ENST00000431742 BAZ2AQ9UIF9 1905 aaKnown RBP17.41■□□□□ 0.38
CSTF3-202ENST00000431742 RPAP1Q9BWH6 1393 aaPredicted RBP17.4■□□□□ 0.38
CSTF3-202ENST00000431742 SSC5DA1L4H1 1573 aa17.4■□□□□ 0.38
CSTF3-202ENST00000431742 COL2A1P02458 1487 aaPredicted RBP17.4■□□□□ 0.38
CSTF3-202ENST00000431742 TRAF5O00463 557 aa17.4■□□□□ 0.38
CSTF3-202ENST00000431742 WDHD1O75717 1129 aaPredicted RBP17.4■□□□□ 0.38
CSTF3-202ENST00000431742 CACNB3P54284 484 aa17.4■□□□□ 0.38
CSTF3-202ENST00000431742 TNFAIP1Q13829 316 aa17.4■□□□□ 0.38
CSTF3-202ENST00000431742 SLFNL1Q499Z3 407 aa17.4■□□□□ 0.38
CSTF3-202ENST00000431742 FAM83AQ86UY5 434 aa17.4■□□□□ 0.38
CSTF3-202ENST00000431742 SKAP1Q86WV1 359 aa17.4■□□□□ 0.38
CSTF3-202ENST00000431742 TICAM2Q86XR7 235 aa17.4■□□□□ 0.38
CSTF3-202ENST00000431742 CERS3Q8IU89 383 aa17.4■□□□□ 0.38
CSTF3-202ENST00000431742 RIOK1Q9BRS2 568 aaKnown RBP17.4■□□□□ 0.38
CSTF3-202ENST00000431742 FSD1Q9BTV5 496 aa17.4■□□□□ 0.38
CSTF3-202ENST00000431742 IDI2Q9BXS1 227 aa17.4■□□□□ 0.38
CSTF3-202ENST00000431742 AATFQ9NY61 560 aaKnown RBP eCLIP17.4■□□□□ 0.38
CSTF3-202ENST00000431742 TMOD2Q9NZR1 351 aa17.4■□□□□ 0.38
CSTF3-202ENST00000431742 SCAF8Q9UPN6 1271 aaKnown RBP17.4■□□□□ 0.38
CSTF3-202ENST00000431742 PPP2R3BQ9Y5P8 575 aa17.4■□□□□ 0.38
CSTF3-202ENST00000431742 RNF113AO15541 343 aaKnown RBP17.39■□□□□ 0.37
CSTF3-202ENST00000431742 BAG3O95817 575 aa17.39■□□□□ 0.37
CSTF3-202ENST00000431742 ZFYP08048 801 aaPredicted RBP17.39■□□□□ 0.37
CSTF3-202ENST00000431742 PLCG2P16885 1265 aa17.39■□□□□ 0.37
CSTF3-202ENST00000431742 NFIAQ12857 509 aa17.39■□□□□ 0.37
CSTF3-202ENST00000431742 DLK2Q6UY11 383 aa17.39■□□□□ 0.37
CSTF3-202ENST00000431742 MIGA1Q8NAN2 632 aa17.39■□□□□ 0.37
CSTF3-202ENST00000431742 NOL10Q9BSC4 688 aaKnown RBP17.39■□□□□ 0.37
CSTF3-202ENST00000431742 DEFB129Q9H1M3 183 aa17.39■□□□□ 0.37
CSTF3-202ENST00000431742 FAM198AQ9UFP1 575 aa17.39■□□□□ 0.37
CSTF3-202ENST00000431742 LAMB1P07942 1786 aa17.38■□□□□ 0.37
CSTF3-202ENST00000431742 TCP10L2B9ZVM9 353 aa17.38■□□□□ 0.37
CSTF3-202ENST00000431742 C1QTNF8P60827 252 aa17.38■□□□□ 0.37
CSTF3-202ENST00000431742 DYNLL1P63167 89 aaKnown RBP17.38■□□□□ 0.37
CSTF3-202ENST00000431742 FMR1Q06787 632 aaKnown RBP eCLIP17.38■□□□□ 0.37
CSTF3-202ENST00000431742 RASA3Q14644 834 aa17.38■□□□□ 0.37
CSTF3-202ENST00000431742 LRRFIP1Q32MZ4 808 aaKnown RBP17.38■□□□□ 0.37
CSTF3-202ENST00000431742 SH3RF3Q8TEJ3 882 aaPredicted RBP17.38■□□□□ 0.37
CSTF3-202ENST00000431742 CDCA5Q96FF9 252 aa17.38■□□□□ 0.37
CSTF3-202ENST00000431742 TEPSINQ96N21 525 aa17.38■□□□□ 0.37
CSTF3-202ENST00000431742 MAGEB6P1A0A0J9YX57 407 aa17.37■□□□□ 0.37
CSTF3-202ENST00000431742 TRIM6-TRIM34B2RNG4 842 aa17.37■□□□□ 0.37
CSTF3-202ENST00000431742 TNNI2P48788 182 aa17.37■□□□□ 0.37
CSTF3-202ENST00000431742 RGS3P49796 1198 aa17.37■□□□□ 0.37
CSTF3-202ENST00000431742 TEX11Q8IYF3 940 aa17.37■□□□□ 0.37
CSTF3-202ENST00000431742 APPBP2Q92624 585 aa17.37■□□□□ 0.37
CSTF3-202ENST00000431742 DDX4Q9NQI0 724 aaKnown RBP17.37■□□□□ 0.37
CSTF3-202ENST00000431742 ENTPD3O75355 529 aa17.36■□□□□ 0.37
CSTF3-202ENST00000431742 ZMYM1Q5SVZ6 1142 aa17.36■□□□□ 0.37
CSTF3-202ENST00000431742 LCORLQ8N3X6 602 aa17.36■□□□□ 0.37
CSTF3-202ENST00000431742 FAM151AQ8WW52 585 aa17.36■□□□□ 0.37
CSTF3-202ENST00000431742 TMEM39BQ9GZU3 492 aa17.36■□□□□ 0.37
CSTF3-202ENST00000431742 PUS7LQ9H0K6 701 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms