RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 TBC1D32Q96NH3 1257 aa9.46□□□□□ -0.9
C9orf3-205ENST00000427193 KRTAP4-12Q9BQ66 201 aa9.46□□□□□ -0.9
C9orf3-205ENST00000427193 RAD18Q9NS91 495 aa9.46□□□□□ -0.9
C9orf3-205ENST00000427193 PRKAG2Q9UGJ0 569 aa9.46□□□□□ -0.9
C9orf3-205ENST00000427193 EIF4G3O43432 1585 aaKnown RBP9.46□□□□□ -0.9
C9orf3-205ENST00000427193 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.45□□□□□ -0.9
C9orf3-205ENST00000427193 EIF1AYO14602 144 aaKnown RBP9.45□□□□□ -0.9
C9orf3-205ENST00000427193 GPR182O15218 404 aa9.45□□□□□ -0.9
C9orf3-205ENST00000427193 MAP7Q14244 749 aa9.45□□□□□ -0.9
C9orf3-205ENST00000427193 MSMPQ1L6U9 139 aa9.45□□□□□ -0.9
C9orf3-205ENST00000427193 ERICH6Q7L0X2 663 aa9.45□□□□□ -0.9
C9orf3-205ENST00000427193 RETREG2Q8NC44 543 aa9.45□□□□□ -0.9
C9orf3-205ENST00000427193 TMC1Q8TDI8 760 aa9.45□□□□□ -0.9
C9orf3-205ENST00000427193 CCDC74AQ96AQ1 378 aa9.45□□□□□ -0.9
C9orf3-205ENST00000427193 DMRTB1Q96MA1 342 aa9.45□□□□□ -0.9
C9orf3-205ENST00000427193 ABCB6Q9NP58 842 aa9.45□□□□□ -0.9
C9orf3-205ENST00000427193 AQRO60306 1485 aaKnown RBP eCLIP9.45□□□□□ -0.9
C9orf3-205ENST00000427193 AP3B2Q13367 1082 aa9.44□□□□□ -0.9
C9orf3-205ENST00000427193 RPS26P11Q5JNZ5 115 aaPredicted RBP9.44□□□□□ -0.9
C9orf3-205ENST00000427193 AKAP4Q5JQC9 854 aa9.44□□□□□ -0.9
C9orf3-205ENST00000427193 ALKBH8Q96BT7 664 aaKnown RBP9.44□□□□□ -0.9
C9orf3-205ENST00000427193 NIF3L1Q9GZT8 377 aa9.44□□□□□ -0.9
C9orf3-205ENST00000427193 TRAK1Q9UPV9 953 aa9.44□□□□□ -0.9
C9orf3-205ENST00000427193 SYNGAP1Q96PV0 1343 aa9.44□□□□□ -0.9
C9orf3-205ENST00000427193 CCDC88BA6NC98 1476 aa9.43□□□□□ -0.9
C9orf3-205ENST00000427193 ADMP35318 185 aa9.43□□□□□ -0.9
C9orf3-205ENST00000427193 DYMQ7RTS9 669 aa9.43□□□□□ -0.9
C9orf3-205ENST00000427193 ARID3AQ99856 593 aa9.43□□□□□ -0.9
C9orf3-205ENST00000427193 RBCK1Q9BYM8 510 aa9.43□□□□□ -0.9
C9orf3-205ENST00000427193 GSX1Q9H4S2 264 aaPredicted RBP9.43□□□□□ -0.9
C9orf3-205ENST00000427193 AP4E1Q9UPM8 1137 aa9.43□□□□□ -0.9
C9orf3-205ENST00000427193 GADD45BO75293 160 aaPredicted RBP9.42□□□□□ -0.9
C9orf3-205ENST00000427193 ECEL1O95672 775 aa9.42□□□□□ -0.9
C9orf3-205ENST00000427193 NFICP08651 508 aa9.42□□□□□ -0.9
C9orf3-205ENST00000427193 TAL1P17542 331 aaPredicted RBP9.42□□□□□ -0.9
C9orf3-205ENST00000427193 RAB6AP20340 208 aa9.42□□□□□ -0.9
C9orf3-205ENST00000427193 SHISA5Q8N114 240 aa9.42□□□□□ -0.9
C9orf3-205ENST00000427193 GATA6Q92908 595 aa9.42□□□□□ -0.9
C9orf3-205ENST00000427193 SEMA6CQ9H3T2 930 aa9.42□□□□□ -0.9
C9orf3-205ENST00000427193 ACSS3Q9H6R3 686 aa9.42□□□□□ -0.9
C9orf3-205ENST00000427193 FAM105AQ9NUU6 356 aa9.42□□□□□ -0.9
C9orf3-205ENST00000427193 ANGEL1Q9UNK9 670 aaKnown RBP9.42□□□□□ -0.9
C9orf3-205ENST00000427193 CLASP1Q7Z460 1538 aa9.41□□□□□ -0.9
C9orf3-205ENST00000427193 TOPBP1Q92547 1522 aa9.41□□□□□ -0.9
C9orf3-205ENST00000427193 TMEM238LA0A1B0GVL6 79 aa9.41□□□□□ -0.9
C9orf3-205ENST00000427193 CYP26A1O43174 497 aa9.41□□□□□ -0.9
C9orf3-205ENST00000427193 PRNPP04156 253 aa9.41□□□□□ -0.9
C9orf3-205ENST00000427193 CYP27A1Q02318 531 aa9.41□□□□□ -0.9
C9orf3-205ENST00000427193 PDE3AQ14432 1141 aa9.41□□□□□ -0.9
C9orf3-205ENST00000427193 CSRNP1Q96S65 589 aa9.41□□□□□ -0.9
C9orf3-205ENST00000427193 PRDM2Q13029 1718 aa9.4□□□□□ -0.9
C9orf3-205ENST00000427193 AOC2O75106 756 aa9.4□□□□□ -0.9
C9orf3-205ENST00000427193 ASPAP45381 313 aa9.4□□□□□ -0.9
C9orf3-205ENST00000427193 WDR18Q9BV38 432 aa9.4□□□□□ -0.9
C9orf3-205ENST00000427193 CCDC39Q9UFE4 941 aa9.4□□□□□ -0.9
C9orf3-205ENST00000427193 ABCC8Q09428 1581 aa9.4□□□□□ -0.9
C9orf3-205ENST00000427193 GRM2Q14416 872 aa9.39□□□□□ -0.91
C9orf3-205ENST00000427193 DUSP27Q5VZP5 1158 aa9.39□□□□□ -0.91
C9orf3-205ENST00000427193 VSIG10LQ86VR7 867 aa9.39□□□□□ -0.91
C9orf3-205ENST00000427193 GLIS3Q8NEA6 775 aa9.39□□□□□ -0.91
C9orf3-205ENST00000427193 FMNL2Q96PY5 1086 aa9.39□□□□□ -0.91
C9orf3-205ENST00000427193 SOWAHDA6NJG2 315 aa9.38□□□□□ -0.91
C9orf3-205ENST00000427193 FAM170BA6NMN3 283 aa9.38□□□□□ -0.91
C9orf3-205ENST00000427193 TXKP42681 527 aa9.38□□□□□ -0.91
C9orf3-205ENST00000427193 HNRNPUQ00839 825 aaKnown RBP eCLIP9.38□□□□□ -0.91
C9orf3-205ENST00000427193 GOLGA2P5Q9HBQ8 144 aa9.38□□□□□ -0.91
C9orf3-205ENST00000427193 BSDC1Q9NW68 430 aaPredicted RBP9.38□□□□□ -0.91
C9orf3-205ENST00000427193 ADGRE2Q9UHX3 823 aa9.38□□□□□ -0.91
C9orf3-205ENST00000427193 GAPVD1Q14C86 1478 aa9.37□□□□□ -0.91
C9orf3-205ENST00000427193 SEZ6L2Q6UXD5 910 aa9.37□□□□□ -0.91
C9orf3-205ENST00000427193 KRTAP1-3Q8IUG1 177 aa9.37□□□□□ -0.91
C9orf3-205ENST00000427193 EPS8L3Q8TE67 593 aaKnown RBP9.37□□□□□ -0.91
C9orf3-205ENST00000427193 FBXL18Q96ME1 805 aa9.37□□□□□ -0.91
C9orf3-205ENST00000427193 FAAP100Q0VG06 881 aa9.36□□□□□ -0.91
C9orf3-205ENST00000427193 PPP4R2Q9NY27 417 aa9.36□□□□□ -0.91
C9orf3-205ENST00000427193 LCE3BQ5TA77 95 aa9.35□□□□□ -0.91
C9orf3-205ENST00000427193 DTHD1Q6ZMT9 781 aa9.35□□□□□ -0.91
C9orf3-205ENST00000427193 ZNF765Q7L2R6 523 aa9.35□□□□□ -0.91
C9orf3-205ENST00000427193 ABI1Q8IZP0 508 aa9.35□□□□□ -0.91
C9orf3-205ENST00000427193 C1GALT1Q9NS00 363 aa9.35□□□□□ -0.91
C9orf3-205ENST00000427193 KRT82Q9NSB4 513 aa9.35□□□□□ -0.91
C9orf3-205ENST00000427193 NLRP2Q9NX02 1062 aa9.35□□□□□ -0.91
C9orf3-205ENST00000427193 PPP1R9AQ9ULJ8 1098 aa9.35□□□□□ -0.91
C9orf3-205ENST00000427193 GNEQ9Y223 722 aaKnown RBP9.35□□□□□ -0.91
C9orf3-205ENST00000427193 DAGLAQ9Y4D2 1042 aa9.35□□□□□ -0.91
C9orf3-205ENST00000427193 TARBP1Q13395 1621 aaKnown RBP9.34□□□□□ -0.91
C9orf3-205ENST00000427193 SYNJ1O43426 1573 aa9.34□□□□□ -0.91
C9orf3-205ENST00000427193 TMPRSS2O15393 492 aa9.34□□□□□ -0.91
C9orf3-205ENST00000427193 SLFN14P0C7P3 912 aa9.34□□□□□ -0.91
C9orf3-205ENST00000427193 XRCC5P13010 732 aaKnown RBP9.34□□□□□ -0.91
C9orf3-205ENST00000427193 ZNF157P51786 506 aaPredicted RBP9.34□□□□□ -0.91
C9orf3-205ENST00000427193 TMC7Q7Z402 723 aa9.34□□□□□ -0.91
C9orf3-205ENST00000427193 CCDC86Q9H6F5 360 aaKnown RBP9.34□□□□□ -0.91
C9orf3-205ENST00000427193 CRIM1Q9NZV1 1036 aa9.34□□□□□ -0.91
C9orf3-205ENST00000427193 DCTN4Q9UJW0 460 aa9.34□□□□□ -0.91
C9orf3-205ENST00000427193 GSTP1P09211 210 aaKnown RBP9.33□□□□□ -0.92
C9orf3-205ENST00000427193 LIG1P18858 919 aa9.33□□□□□ -0.92
C9orf3-205ENST00000427193 PPP2R3AQ06190 1150 aa9.33□□□□□ -0.92
C9orf3-205ENST00000427193 OGFOD3Q6PK18 319 aa9.33□□□□□ -0.92
C9orf3-205ENST00000427193 KRTAP19-1Q8IUB9 90 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms