RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 FKBP15Q5T1M5 1219 aa9.31□□□□□ -0.92
ATXN3-203ENST00000393287 CREB3L3Q68CJ9 461 aa9.31□□□□□ -0.92
ATXN3-203ENST00000393287 RUFY3Q7L099 469 aa9.31□□□□□ -0.92
ATXN3-203ENST00000393287 DDX11Q96FC9 970 aa9.31□□□□□ -0.92
ATXN3-203ENST00000393287 TRAK2O60296 914 aa9.3□□□□□ -0.92
ATXN3-203ENST00000393287 KIF22Q14807 665 aa9.3□□□□□ -0.92
ATXN3-203ENST00000393287 TBC1D32Q96NH3 1257 aa9.3□□□□□ -0.92
ATXN3-203ENST00000393287 ISCA1Q9BUE6 129 aa9.3□□□□□ -0.92
ATXN3-203ENST00000393287 BSDC1Q9NW68 430 aaPredicted RBP9.3□□□□□ -0.92
ATXN3-203ENST00000393287 PXDNLA1KZ92 1463 aa9.3□□□□□ -0.92
ATXN3-203ENST00000393287 TAF5LO75529 589 aa9.3□□□□□ -0.92
ATXN3-203ENST00000393287 MAP3K11Q16584 847 aa9.3□□□□□ -0.92
ATXN3-203ENST00000393287 KCNG1Q9UIX4 513 aa9.3□□□□□ -0.92
ATXN3-203ENST00000393287 USP42Q9H9J4 1324 aaKnown RBP9.3□□□□□ -0.92
ATXN3-203ENST00000393287 PPP1R2P41236 205 aa9.3□□□□□ -0.92
ATXN3-203ENST00000393287 COA1Q9GZY4 146 aa9.3□□□□□ -0.92
ATXN3-203ENST00000393287 DEKP35659 375 aaKnown RBP9.3□□□□□ -0.92
ATXN3-203ENST00000393287 NCBP1Q09161 790 aaKnown RBP9.3□□□□□ -0.92
ATXN3-203ENST00000393287 HLFQ16534 295 aa9.3□□□□□ -0.92
ATXN3-203ENST00000393287 MICU3Q86XE3 530 aa9.3□□□□□ -0.92
ATXN3-203ENST00000393287 TANGO6Q9C0B7 1094 aa9.3□□□□□ -0.92
ATXN3-203ENST00000393287 GREM2Q9H772 168 aa9.3□□□□□ -0.92
ATXN3-203ENST00000393287 SERPINC1P01008 464 aa9.3□□□□□ -0.92
ATXN3-203ENST00000393287 USP14P54578 494 aa9.3□□□□□ -0.92
ATXN3-203ENST00000393287 Q6ZUG5 572 aa9.3□□□□□ -0.92
ATXN3-203ENST00000393287 PDCL3Q9H2J4 239 aa9.3□□□□□ -0.92
ATXN3-203ENST00000393287 TNNQ9UQP3 1299 aa9.3□□□□□ -0.92
ATXN3-203ENST00000393287 MMP14P50281 582 aa9.29□□□□□ -0.92
ATXN3-203ENST00000393287 NAP1L1P55209 391 aaKnown RBP9.29□□□□□ -0.92
ATXN3-203ENST00000393287 HAND2P61296 217 aa9.29□□□□□ -0.92
ATXN3-203ENST00000393287 CEBPZQ03701 1054 aaKnown RBP9.29□□□□□ -0.92
ATXN3-203ENST00000393287 UBE3CQ15386 1083 aa9.29□□□□□ -0.92
ATXN3-203ENST00000393287 KRI1Q8N9T8 703 aaKnown RBP9.29□□□□□ -0.92
ATXN3-203ENST00000393287 ABCC12Q96J65 1359 aa9.29□□□□□ -0.92
ATXN3-203ENST00000393287 ARHGEF28Q8N1W1 1705 aaKnown RBP9.29□□□□□ -0.92
ATXN3-203ENST00000393287 STX6O43752 255 aa9.29□□□□□ -0.92
ATXN3-203ENST00000393287 TBCAO75347 108 aaKnown RBP9.29□□□□□ -0.92
ATXN3-203ENST00000393287 CAMTA2O94983 1202 aa9.29□□□□□ -0.92
ATXN3-203ENST00000393287 KIF4AO95239 1232 aa9.29□□□□□ -0.92
ATXN3-203ENST00000393287 TIMM10P62072 90 aa9.29□□□□□ -0.92
ATXN3-203ENST00000393287 INTS4Q96HW7 963 aaKnown RBP9.29□□□□□ -0.92
ATXN3-203ENST00000393287 PDE8BO95263 885 aa9.29□□□□□ -0.92
ATXN3-203ENST00000393287 CDR1P51861 262 aa9.29□□□□□ -0.92
ATXN3-203ENST00000393287 SUPT20HL1Q3ZLR7 823 aa9.29□□□□□ -0.92
ATXN3-203ENST00000393287 ALG1Q9BT22 464 aa9.29□□□□□ -0.92
ATXN3-203ENST00000393287 CCDC183Q5T5S1 534 aa9.29□□□□□ -0.92
ATXN3-203ENST00000393287 TBC1D9BQ66K14 1250 aa9.29□□□□□ -0.92
ATXN3-203ENST00000393287 HEATR3Q7Z4Q2 680 aa9.29□□□□□ -0.92
ATXN3-203ENST00000393287 TTLL11Q8NHH1 800 aa9.29□□□□□ -0.92
ATXN3-203ENST00000393287 KLHDC4Q8TBB5 520 aa9.29□□□□□ -0.92
ATXN3-203ENST00000393287 DBNDD2Q9BQY9 259 aa9.29□□□□□ -0.92
ATXN3-203ENST00000393287 BCL9O00512 1426 aa9.29□□□□□ -0.92
ATXN3-203ENST00000393287 MIGA1Q8NAN2 632 aa9.29□□□□□ -0.92
ATXN3-203ENST00000393287 CHURC1Q8WUH1 139 aa9.29□□□□□ -0.92
ATXN3-203ENST00000393287 HAUS7Q99871 368 aa9.29□□□□□ -0.92
ATXN3-203ENST00000393287 DEXIO95424 95 aa9.28□□□□□ -0.92
ATXN3-203ENST00000393287 ACBD3Q9H3P7 528 aa9.28□□□□□ -0.92
ATXN3-203ENST00000393287 MFSD14BQ5SR56 506 aa9.28□□□□□ -0.92
ATXN3-203ENST00000393287 PIBF1Q8WXW3 757 aa9.28□□□□□ -0.92
ATXN3-203ENST00000393287 BRF1Q92994 677 aa9.28□□□□□ -0.92
ATXN3-203ENST00000393287 CCDC17Q96LX7 622 aa9.28□□□□□ -0.92
ATXN3-203ENST00000393287 UPF3BQ9BZI7 483 aaKnown RBP9.28□□□□□ -0.92
ATXN3-203ENST00000393287 TRIM5Q9C035 493 aa9.28□□□□□ -0.92
ATXN3-203ENST00000393287 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.28□□□□□ -0.92
ATXN3-203ENST00000393287 USP40Q9NVE5 1235 aa9.28□□□□□ -0.92
ATXN3-203ENST00000393287 KNDC1Q76NI1 1749 aa9.28□□□□□ -0.92
ATXN3-203ENST00000393287 GTF2IP78347 998 aa9.28□□□□□ -0.92
ATXN3-203ENST00000393287 HOMER1Q86YM7 354 aa9.28□□□□□ -0.92
ATXN3-203ENST00000393287 SULF1Q8IWU6 871 aa9.28□□□□□ -0.92
ATXN3-203ENST00000393287 PDILTQ8N807 584 aa9.28□□□□□ -0.92
ATXN3-203ENST00000393287 CRAMP1Q96RY5 1269 aa9.28□□□□□ -0.92
ATXN3-203ENST00000393287 DHX36Q9H2U1 1008 aaKnown RBP9.28□□□□□ -0.92
ATXN3-203ENST00000393287 XRN1Q8IZH2 1706 aaKnown RBP9.28□□□□□ -0.92
ATXN3-203ENST00000393287 VPS36Q86VN1 386 aa9.28□□□□□ -0.92
ATXN3-203ENST00000393287 ZNF34Q8IZ26 560 aa9.28□□□□□ -0.92
ATXN3-203ENST00000393287 TTF2Q9UNY4 1162 aaKnown RBP9.28□□□□□ -0.92
ATXN3-203ENST00000393287 RFX7Q2KHR2 1363 aa9.28□□□□□ -0.92
ATXN3-203ENST00000393287 CAVIN1Q6NZI2 390 aaKnown RBP9.28□□□□□ -0.92
ATXN3-203ENST00000393287 ARMC9Q7Z3E5 817 aa9.28□□□□□ -0.92
ATXN3-203ENST00000393287 IVNS1ABPQ9Y6Y0 642 aa9.28□□□□□ -0.92
ATXN3-203ENST00000393287 UBA7P41226 1012 aa9.27□□□□□ -0.92
ATXN3-203ENST00000393287 TTLL5Q6EMB2 1281 aa9.27□□□□□ -0.92
ATXN3-203ENST00000393287 PRR5LQ6MZQ0 368 aa9.27□□□□□ -0.92
ATXN3-203ENST00000393287 ATP8A2Q9NTI2 1148 aa9.27□□□□□ -0.92
ATXN3-203ENST00000393287 hCG_1984214I3L0E3 225 aa9.27□□□□□ -0.93
ATXN3-203ENST00000393287 GPAA1O43292 621 aa9.27□□□□□ -0.93
ATXN3-203ENST00000393287 CCDC172P0C7W6 258 aa9.27□□□□□ -0.93
ATXN3-203ENST00000393287 FMNL3Q8IVF7 1028 aa9.27□□□□□ -0.93
ATXN3-203ENST00000393287 ZNF713Q8N859 430 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-203ENST00000393287 VAT1LQ9HCJ6 419 aa9.27□□□□□ -0.93
ATXN3-203ENST00000393287 GALNT17Q6IS24 598 aa9.27□□□□□ -0.93
ATXN3-203ENST00000393287 MED1Q15648 1581 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-203ENST00000393287 ONECUT3O60422 494 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-203ENST00000393287 RPS6KB1P23443 525 aa9.27□□□□□ -0.93
ATXN3-203ENST00000393287 CCT2P78371 535 aaKnown RBP9.27□□□□□ -0.93
ATXN3-203ENST00000393287 CIAPIN1Q6FI81 312 aa9.27□□□□□ -0.93
ATXN3-203ENST00000393287 COL23A1Q86Y22 540 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-203ENST00000393287 ARMT1Q9H993 441 aa9.27□□□□□ -0.93
ATXN3-203ENST00000393287 NASPP49321 788 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-203ENST00000393287 NFKBIBQ15653 356 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms