RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 PPP4CP60510 307 aa19.36■□□□□ 0.69
TPM1-201ENST00000267996 RALYLQ86SE5 291 aaKnown RBP19.36■□□□□ 0.69
TPM1-201ENST00000267996 SDR42E1Q8WUS8 393 aa19.36■□□□□ 0.69
TPM1-201ENST00000267996 BRF1Q92994 677 aa19.36■□□□□ 0.69
TPM1-201ENST00000267996 ZDHHC9Q9Y397 364 aa19.36■□□□□ 0.69
TPM1-201ENST00000267996 LDHCP07864 332 aa19.35■□□□□ 0.69
TPM1-201ENST00000267996 TRDNQ13061 729 aa19.35■□□□□ 0.69
TPM1-201ENST00000267996 PKP1Q13835 747 aa19.35■□□□□ 0.69
TPM1-201ENST00000267996 NECAB1Q8N987 351 aa19.35■□□□□ 0.69
TPM1-201ENST00000267996 STAG1Q8WVM7 1258 aa19.35■□□□□ 0.69
TPM1-201ENST00000267996 CRNKL1Q9BZJ0 848 aaKnown RBP19.35■□□□□ 0.69
TPM1-201ENST00000267996 AATFQ9NY61 560 aaKnown RBP eCLIP19.35■□□□□ 0.69
TPM1-201ENST00000267996 SUGT1Q9Y2Z0 365 aa19.35■□□□□ 0.69
TPM1-201ENST00000267996 PRC1O43663 620 aa19.34■□□□□ 0.69
TPM1-201ENST00000267996 AKNAD1Q5T1N1 836 aa19.34■□□□□ 0.69
TPM1-201ENST00000267996 FAM163AQ96GL9 167 aaPredicted RBP19.34■□□□□ 0.69
TPM1-201ENST00000267996 TACC3Q9Y6A5 838 aa19.34■□□□□ 0.69
TPM1-201ENST00000267996 PFKFB2O60825 505 aa19.33■□□□□ 0.69
TPM1-201ENST00000267996 BRD1O95696 1058 aa19.33■□□□□ 0.69
TPM1-201ENST00000267996 FGD1P98174 961 aa19.33■□□□□ 0.69
TPM1-201ENST00000267996 MFSD14BQ5SR56 506 aa19.33■□□□□ 0.69
TPM1-201ENST00000267996 CHST3Q7LGC8 479 aa19.33■□□□□ 0.69
TPM1-201ENST00000267996 GTF3C6Q969F1 213 aa19.33■□□□□ 0.69
TPM1-201ENST00000267996 ATP8A2Q9NTI2 1148 aa19.33■□□□□ 0.69
TPM1-201ENST00000267996 SMC3Q9UQE7 1217 aa19.33■□□□□ 0.69
TPM1-201ENST00000267996 MROH7-TTC4A0A0A0MT08 1334 aa19.33■□□□□ 0.68
TPM1-201ENST00000267996 NEDD4P46934 1319 aa19.33■□□□□ 0.68
TPM1-201ENST00000267996 KCNA3P22001 575 aa19.33■□□□□ 0.68
TPM1-201ENST00000267996 MCM4P33991 863 aa19.33■□□□□ 0.68
TPM1-201ENST00000267996 GTF2IP78347 998 aa19.33■□□□□ 0.68
TPM1-201ENST00000267996 CTDSPL2Q05D32 466 aa19.33■□□□□ 0.68
TPM1-201ENST00000267996 PPARAQ07869 468 aa19.33■□□□□ 0.68
TPM1-201ENST00000267996 NKX2-3Q8TAU0 364 aa19.33■□□□□ 0.68
TPM1-201ENST00000267996 ZNF274Q96GC6 653 aaPredicted RBP19.33■□□□□ 0.68
TPM1-201ENST00000267996 CNNM2Q9H8M5 875 aa19.33■□□□□ 0.68
TPM1-201ENST00000267996 MYH2Q9UKX2 1941 aa19.32■□□□□ 0.68
TPM1-201ENST00000267996 APOBRQ0VD83 1088 aa19.32■□□□□ 0.68
TPM1-201ENST00000267996 DIXDC1Q155Q3 683 aa19.32■□□□□ 0.68
TPM1-201ENST00000267996 GRIPAP1Q4V328 841 aa19.32■□□□□ 0.68
TPM1-201ENST00000267996 CYB5R4Q7L1T6 521 aa19.32■□□□□ 0.68
TPM1-201ENST00000267996 CERS3Q8IU89 383 aa19.32■□□□□ 0.68
TPM1-201ENST00000267996 DCP1AQ9NPI6 582 aaPredicted RBP19.32■□□□□ 0.68
TPM1-201ENST00000267996 GAKO14976 1311 aa19.32■□□□□ 0.68
TPM1-201ENST00000267996 DOK7Q18PE1 504 aa19.31■□□□□ 0.68
TPM1-201ENST00000267996 MFSD6Q6ZSS7 791 aa19.31■□□□□ 0.68
TPM1-201ENST00000267996 PODNQ7Z5L7 613 aa19.31■□□□□ 0.68
TPM1-201ENST00000267996 TTLL6Q8N841 843 aa19.31■□□□□ 0.68
TPM1-201ENST00000267996 KRT23Q9C075 422 aa19.31■□□□□ 0.68
TPM1-201ENST00000267996 MTFR1LQ9H019 292 aa19.31■□□□□ 0.68
TPM1-201ENST00000267996 RNF41Q9H4P4 317 aaPredicted RBP19.31■□□□□ 0.68
TPM1-201ENST00000267996 GPHNQ9NQX3 736 aaPredicted RBP19.31■□□□□ 0.68
TPM1-201ENST00000267996 BAZ2AQ9UIF9 1905 aaKnown RBP19.3■□□□□ 0.68
TPM1-201ENST00000267996 GPR75-ASB3A0A0A6YYF3 556 aa19.3■□□□□ 0.68
TPM1-201ENST00000267996 B4E1Z4 1266 aa19.3■□□□□ 0.68
TPM1-201ENST00000267996 BAG3O95817 575 aa19.3■□□□□ 0.68
TPM1-201ENST00000267996 FGRP09769 529 aa19.3■□□□□ 0.68
TPM1-201ENST00000267996 SBK1Q52WX2 424 aa19.3■□□□□ 0.68
TPM1-201ENST00000267996 CTR9Q6PD62 1173 aa19.3■□□□□ 0.68
TPM1-201ENST00000267996 SLF2Q8IX21 1173 aa19.3■□□□□ 0.68
TPM1-201ENST00000267996 GBP4Q96PP9 640 aa19.3■□□□□ 0.68
TPM1-201ENST00000267996 INCENPQ9NQS7 918 aa19.3■□□□□ 0.68
TPM1-201ENST00000267996 MKRN1Q9UHC7 482 aaKnown RBP19.3■□□□□ 0.68
TPM1-201ENST00000267996 ZBTB7AO95365 584 aa19.3■□□□□ 0.68
TPM1-201ENST00000267996 PCP11498 1178 aaKnown RBP19.3■□□□□ 0.68
TPM1-201ENST00000267996 DPEP1P16444 411 aa19.3■□□□□ 0.68
TPM1-201ENST00000267996 GJB2P29033 226 aa19.3■□□□□ 0.68
TPM1-201ENST00000267996 PDIA3P30101 505 aaKnown RBP19.3■□□□□ 0.68
TPM1-201ENST00000267996 TMEM87BQ96K49 555 aa19.3■□□□□ 0.68
TPM1-201ENST00000267996 SCRN1Q12765 414 aa19.29■□□□□ 0.68
TPM1-201ENST00000267996 STK3Q13188 491 aa19.29■□□□□ 0.68
TPM1-201ENST00000267996 CERS5Q8N5B7 392 aa19.29■□□□□ 0.68
TPM1-201ENST00000267996 SUPT20HQ8NEM7 779 aa19.29■□□□□ 0.68
TPM1-201ENST00000267996 UPF1Q92900 1129 aaKnown RBP eCLIP19.29■□□□□ 0.68
TPM1-201ENST00000267996 LLPHQ9BRT6 129 aaKnown RBP19.29■□□□□ 0.68
TPM1-201ENST00000267996 MTA3Q9BTC8 594 aa19.29■□□□□ 0.68
TPM1-201ENST00000267996 ZSWIM5Q9P217 1185 aa19.29■□□□□ 0.68
TPM1-201ENST00000267996 MINDY4BA8MYZ0 360 aa19.28■□□□□ 0.68
TPM1-201ENST00000267996 USP17L12C9JPN9 530 aa19.28■□□□□ 0.68
TPM1-201ENST00000267996 USP17L21D6R901 530 aa19.28■□□□□ 0.68
TPM1-201ENST00000267996 SH2B2O14492 632 aaPredicted RBP19.28■□□□□ 0.68
TPM1-201ENST00000267996 TGFB2P61812 414 aa19.28■□□□□ 0.68
TPM1-201ENST00000267996 FKBP1AP62942 108 aaKnown RBP19.28■□□□□ 0.68
TPM1-201ENST00000267996 KIAA2012Q0VF49 1180 aa19.28■□□□□ 0.68
TPM1-201ENST00000267996 IGDCC4Q8TDY8 1250 aa19.28■□□□□ 0.68
TPM1-201ENST00000267996 SH3RF3Q8TEJ3 882 aaPredicted RBP19.28■□□□□ 0.68
TPM1-201ENST00000267996 NOL10Q9BSC4 688 aaKnown RBP19.28■□□□□ 0.68
TPM1-201ENST00000267996 ZNF219Q9P2Y4 722 aaPredicted RBP19.28■□□□□ 0.68
TPM1-201ENST00000267996 ANGEL1Q9UNK9 670 aaKnown RBP19.28■□□□□ 0.68
TPM1-201ENST00000267996 WDR33Q9C0J8 1336 aaKnown RBP19.28■□□□□ 0.68
TPM1-201ENST00000267996 BAG4O95429 457 aaKnown RBP19.27■□□□□ 0.68
TPM1-201ENST00000267996 PDIA4P13667 645 aaKnown RBP19.27■□□□□ 0.68
TPM1-201ENST00000267996 SYT1P21579 422 aa19.27■□□□□ 0.68
TPM1-201ENST00000267996 CHMP4CQ96CF2 233 aa19.27■□□□□ 0.68
TPM1-201ENST00000267996 ARPP21Q9UBL0 812 aaPredicted RBP19.27■□□□□ 0.68
TPM1-201ENST00000267996 BRPF3Q9ULD4 1205 aa19.27■□□□□ 0.68
TPM1-201ENST00000267996 G3V3G9 751 aa19.27■□□□□ 0.67
TPM1-201ENST00000267996 C21orf2O43822 256 aa19.27■□□□□ 0.67
TPM1-201ENST00000267996 KDM4AO75164 1064 aa19.27■□□□□ 0.67
TPM1-201ENST00000267996 POLD1P28340 1107 aa19.27■□□□□ 0.67
TPM1-201ENST00000267996 BTDP43251 543 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms