RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Cyp2d34L7N463 504 aa12.38□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Igflr1Q3U4N7 345 aa12.38□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Fez2Q6TYB5 348 aa12.38□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Ankib1Q6ZPS6 1085 aa12.38□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 BrapQ99MP8 591 aa12.38□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Tcof1O08784 1320 aaKnown RBP12.38□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Capn2O08529 700 aa12.38□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Diaph1O08808 1255 aa12.38□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Ppfibp2O35711 882 aa12.38□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Hspd1P63038 573 aaKnown RBP12.38□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Itga6Q61739 1091 aa12.38□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Zfp202Q8C879 641 aa12.38□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Lrit1Q8K099 624 aa12.38□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Mylk2Q8VCR8 613 aa12.38□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Ltb4r2Q9JJL9 360 aa12.38□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 AW822073A0A0N4SUK1 652 aa12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Slc1a4O35874 532 aa12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 CebpaP53566 359 aa12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Trak2Q6P9N8 913 aa12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Trim56Q80VI1 734 aaKnown RBP12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Ints4Q8CIM8 964 aa12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Lonp2Q9DBN5 852 aa12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Jakmip2D3YXK0 820 aa12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 LtkP08923 888 aa12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Exosc10P56960 887 aaKnown RBP12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Sptlc2P97363 560 aaKnown RBP12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Cep126Q0VBV7 1103 aa12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Atl2Q6PA06 583 aa12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Fam53cQ8BXQ8 393 aa12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Smc4Q8CG47 1286 aa12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Alg3Q8K2A8 438 aa12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Krt25Q8VCW2 446 aa12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Klf15Q9EPW2 415 aa12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Sec62Q8BU14 398 aaKnown RBP12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Rec8Q8C5S7 591 aa12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Phf20l1Q8CCJ9 1013 aa12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Mei1Q9D4I2 1268 aa12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 PdiltQ9DAN1 588 aa12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Cwc25Q9DBF7 416 aa12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Large1Q9Z1M7 756 aa12.37□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Sos2Q02384 1333 aa12.36□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 ZyxQ62523 564 aa12.36□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Q66JV7 365 aa12.36□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Rdm1Q9CQK3 281 aa12.36□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Cep83Q9D5R3 692 aa12.36□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Pde3aQ9Z0X4 1141 aa12.36□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Gsdma2Q32M21 443 aa12.36□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Cep120Q7TSG1 988 aa12.36□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Etf1Q8BWY3 437 aaKnown RBP12.36□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 AidaQ8C4Q6 305 aa12.36□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 H2afxP27661 143 aaKnown RBP12.35□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Fnbp4Q6ZQ03 1031 aa12.35□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Larp6Q8BN59 492 aa12.35□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Fam102bQ8BQS4 339 aa12.35□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Atad2Q8CDM1 1040 aa12.35□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Trim59Q922Y2 403 aa12.35□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Acot9Q9R0X4 439 aaKnown RBP12.35□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Ric1Q69ZJ7 1422 aa12.35□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Usp42B2RQC2 1324 aaKnown RBP12.35□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Eya2O08575 532 aa12.35□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 NefhP19246 1090 aa12.35□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Myd88P22366 296 aa12.35□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Tmem266Q8BZB3 538 aa12.35□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Fam76aQ922G2 307 aa12.35□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Gm29094F6Q785 221 aa12.35□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Prl3d2F6R3P9 224 aa12.35□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Pfkfb1P70266 471 aa12.35□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Pde4dQ01063 747 aa12.35□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Ank1Q02357 1862 aa12.35□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Maats1Q8BRC6 783 aa12.35□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Nop2Q922K7 793 aaKnown RBP12.35□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 MthfsQ9D110 203 aa12.35□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Btn2a2A4QPC6 514 aa12.34□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Vmn2r23E9PXI5 849 aa12.34□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 4930523C07RikE9Q2T4 99 aa12.34□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Cdc37Q61081 379 aa12.34□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Acnat2Q8BGG9 420 aa12.34□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 ChmQ9QXG2 665 aa12.34□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Atp12aQ9Z1W8 1035 aa12.34□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Rps6ka4Q9Z2B9 773 aa12.34□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Ktn1Q61595 1327 aaKnown RBP12.34□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Cplx1P63040 134 aa12.34□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Asap2Q7SIG6 958 aa12.34□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Ncaph2Q8BSP2 607 aa12.34□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Srek1Q8BZX4 494 aaKnown RBP12.34□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Lrrc2Q8VDB8 371 aa12.34□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Naa16Q9DBB4 864 aa12.34□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 Grin2dQ03391 1323 aa12.34□□□□□ -0.43
Prpf40b-202ENSMUST00000118287 AK157302I3ITR1 129 aa12.33□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 GmnnO88513 206 aa12.33□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Gng11P61953 73 aa12.33□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Ttc19Q8CC21 365 aa12.33□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Pcdhgc5Q91XW9 944 aa12.33□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Isca1Q9D924 129 aa12.33□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Npc1l1Q6T3U4 1333 aa12.33□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Ttll12Q3UDE2 639 aa12.33□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Prpf4bQ61136 1007 aaKnown RBP12.33□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Tpm4Q6IRU2 248 aa12.33□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 Dydc1Q9D9T0 175 aa12.33□□□□□ -0.44
Prpf40b-202ENSMUST00000118287 MetP16056 1379 aa12.33□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms