RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Ncoa5Q91W39 579 aaKnown RBP12.45□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Hmgb1P63158 215 aaKnown RBP12.45□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Calml3Q9D6P8 149 aa12.45□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Sept14Q9DA97 430 aa12.45□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Pm20d1Q8C165 503 aa12.45□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Usp11Q99K46 921 aa12.45□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Cul7Q8VE73 1689 aa12.45□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Efhd1Q9D4J1 240 aa12.45□□□□□ -0.42
Scn8a-203ENSMUST00000108908 LdhaP06151 332 aaKnown RBP12.44□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Eef2P58252 858 aaKnown RBP12.44□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Rad17Q6NXW6 688 aa12.44□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Cyp27a1Q9DBG1 533 aa12.44□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Syde2E9PUP1 1314 aa12.44□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Gm5934D3Z4U6 212 aa12.44□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Cdc42bpaQ3UU96 1719 aa12.44□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Tm6sf1P58749 370 aa12.44□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Tpcn2Q8BWC0 731 aa12.44□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Gpcpd1Q8C0L9 675 aa12.44□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Tlr7P58681 1050 aa12.44□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Kcnj14Q8JZN3 434 aa12.44□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Arhgef6Q8K4I3 771 aa12.44□□□□□ -0.42
Scn8a-203ENSMUST00000108908 AceP09470 1312 aa12.44□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Svs3aF2Z472 265 aa12.44□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Fez2Q6TYB5 348 aa12.44□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Serpinb6bO08804 377 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Tagap1P0CAX8 505 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Fgfr1opQ66JX5 399 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Ccdc148Q6P5U8 527 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Kif2cQ922S8 721 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Mxra7Q9CZH7 178 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Uggt2E9Q4X2 1504 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 PparaP23204 468 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Shtn1Q8K2Q9 631 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Kcnh3Q9WVJ0 1095 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Gm1993A6X8I0 212 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 SlxD3Z347 212 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Pdrg1P59048 133 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Kif1bpQ6ZPU9 617 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Ubxn1Q922Y1 297 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Znf608Q56A10 1511 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Krt13P08730 437 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 4930504O13RikQ8C5Z9 145 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Kif17Q99PW8 1038 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 StambpQ9CQ26 424 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Lrp2bpQ9D4C6 346 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Prl3d1P18121 224 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Oxr1Q4KMM3 866 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Rexo1Q7TT28 1213 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Enox2Q8R0Z2 598 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Kif14L0N7N1 1674 aaKnown RBP12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Apol10bG3X9K7 334 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Prkg1P0C605 671 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Atp8a2P98200 1148 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Tmtc2Q56A06 836 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Tfcp2Q9ERA0 502 aa12.43□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Abcc3B2RX12 1523 aa12.42□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Synj2Q9D2G5 1434 aa12.42□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Ccdc170D3YXL0 722 aa12.42□□□□□ -0.42
Scn8a-203ENSMUST00000108908 ChkbO55229 394 aa12.42□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Arid3aQ62431 601 aa12.42□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Tbc1d2B1AVH7 922 aa12.42□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Gpbp1Q6NXH3 473 aaKnown RBP12.42□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Bsdc1Q80Y55 427 aa12.42□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Taok3Q8BYC6 898 aa12.42□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Krt20Q9D312 431 aa12.42□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Parp2O88554 559 aa12.42□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Arhgef1Q61210 920 aaKnown RBP12.42□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Ccpg1Q640L3 753 aa12.42□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Gm38392E9Q2A2 434 aa12.42□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Nek5Q7TSC3 627 aa12.42□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Pagr1bF6V0H0 108 aa12.41□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Zfpm1O35615 995 aa12.41□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Tdo2P48776 406 aa12.41□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Spa17Q62252 149 aa12.41□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Kiaa1328Q6NZK5 612 aa12.41□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Pagr1aQ99L02 253 aa12.41□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Zfp202Q8C879 641 aa12.41□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Wdr17E9Q271 1322 aa12.41□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Erbb3Q61526 1339 aa12.41□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Kif24Q6NWW5 1356 aa12.41□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Myom2Q14BI5 1463 aa12.41□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Csrnp1P59054 583 aa12.41□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Znf667Q2TL60 609 aa12.41□□□□□ -0.42
Scn8a-203ENSMUST00000108908 InsrrQ9WTL4 1300 aa12.41□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Depdc5P61460 1591 aa12.41□□□□□ -0.42
Scn8a-203ENSMUST00000108908 AW822073A0A0N4SUK1 652 aa12.41□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Stoml1Q8CI66 399 aa12.41□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Atg3Q9CPX6 314 aa12.41□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Ppfibp2O35711 882 aa12.41□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Prpf40bQ80W14 870 aa12.41□□□□□ -0.42
Scn8a-203ENSMUST00000108908 SnrkQ8VDU5 748 aa12.41□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Trim28Q62318 834 aa12.4□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Tom1l2Q5SRX1 507 aa12.4□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Rab3il1Q8VDV3 383 aa12.4□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Med10Q9CXU0 135 aa12.4□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Aox1O54754 1333 aa12.4□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Aox4Q3TYQ9 1336 aa12.4□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Vat1lQ80TB8 417 aa12.4□□□□□ -0.42
Scn8a-203ENSMUST00000108908 PaoxQ8C0L6 504 aa12.4□□□□□ -0.42
Scn8a-203ENSMUST00000108908 Pde5aQ8CG03 865 aa12.4□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 244.8 ms