RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Top3bQ9Z321 862 aaKnown RBP10.46□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Nlrc5C3VPR6 1915 aa10.46□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Rgs12Q8CGE9 1381 aa10.45□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Trim5E9PV98 497 aa10.45□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Cacnb3P54285 484 aa10.45□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Adgrg2Q8CJ12 1009 aa10.45□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Pqbp1Q91VJ5 263 aaKnown RBP10.45□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Itm2cQ91VK4 269 aa10.45□□□□□ -0.74
Scn8a-202ENSMUST00000096198 LratQ9JI60 231 aa10.45□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Txnrd2Q9JLT4 524 aa10.45□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Dchs2A0A0A6YW72 3346 aa10.45□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Gp6P0C191 313 aa10.44□□□□□ -0.74
Scn8a-202ENSMUST00000096198 HmgcrQ01237 887 aa10.44□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Palb2Q3U0P1 1104 aa10.44□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Ube2zQ3UE37 356 aa10.44□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Tbc1d9Q3UYK3 1264 aa10.44□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Gas6Q61592 674 aa10.44□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Zfp90Q61967 636 aa10.44□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Fchsd1Q6PFY1 688 aa10.44□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Phf20Q8BLG0 1010 aaKnown RBP10.44□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Rfc4Q99J62 364 aa10.44□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Glrx3Q9CQM9 337 aa10.44□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Ankrd11E9Q4F7 2643 aa10.44□□□□□ -0.74
Scn8a-202ENSMUST00000096198 KalrnA2CG49 2964 aa10.44□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Dlg5E9Q9R9 1921 aa10.43□□□□□ -0.74
Scn8a-202ENSMUST00000096198 St3gal2Q11204 350 aa10.43□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Kiaa1211Q5PR69 1207 aa10.43□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Nell2Q61220 819 aa10.43□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Cyp2c29Q64458 490 aa10.43□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Necab2Q91ZP9 389 aa10.43□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Znhit2Q9QY66 399 aa10.43□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Heg1E9Q7X6 1337 aa10.42□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Pitpnm1O35954 1243 aa10.42□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Art2aP17981 287 aa10.42□□□□□ -0.74
Scn8a-202ENSMUST00000096198 SelpQ01102 768 aa10.42□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Spata18Q0P557 537 aa10.42□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Defb19Q8K3I8 83 aa10.42□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Bud13Q8R149 637 aa10.42□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Spred2Q924S7 410 aa10.42□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Serbp1Q9CY58 407 aaKnown RBP10.42□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Cry2Q9R194 592 aa10.42□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Ppp2r3dQ9Z176 491 aa10.42□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Dmxl1Q6PNC0 3013 aa10.42□□□□□ -0.74
Scn8a-202ENSMUST00000096198 CenpfE9Q3P4 2997 aaKnown RBP10.42□□□□□ -0.74
Scn8a-202ENSMUST00000096198 4931408C20RikE9PWP9 1381 aa10.41□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Sox9Q04887 507 aa10.41□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Cfap52Q5F201 620 aa10.41□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Acap3Q6NXL5 833 aa10.41□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Fbxl21Q8BFZ4 434 aa10.41□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Clca2Q8BG22 942 aa10.41□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Mmp20P57748 482 aa10.4□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Znf496Q5SXI5 585 aa10.4□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Zbtb40Q6PCS8 1258 aa10.4□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Ccar1Q8CH18 1146 aaKnown RBP10.4□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Pcdhgc5Q91XW9 944 aa10.4□□□□□ -0.74
Scn8a-202ENSMUST00000096198 CsadQ9DBE0 493 aa10.4□□□□□ -0.74
Scn8a-202ENSMUST00000096198 PfkpQ9WUA3 784 aaKnown RBP10.4□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Ly6g6dQ9Z1Q3 135 aa10.4□□□□□ -0.74
Scn8a-202ENSMUST00000096198 Plekhh1Q80TI1 1356 aa10.39□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Greb1lB9EJV3 1913 aa10.39□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Cfap99A0A140LIX9 648 aa10.39□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Zscan4-ps1A0A1C7CYV3 506 aa10.39□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Aplp1Q03157 653 aa10.39□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Chpf2Q3UU43 768 aa10.39□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Grxcr1Q50H32 290 aa10.39□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Tbc1d1Q60949 1255 aa10.39□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Taco1Q8K0Z7 294 aaKnown RBP10.39□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Bcorl1A2AQH4 1781 aa10.39□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Gprasp1Q5U4C1 1347 aa10.38□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Spata21Q8BHW6 681 aa10.38□□□□□ -0.75
Scn8a-202ENSMUST00000096198 4930504O13RikQ8C5Z9 145 aa10.38□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Ttc19Q8CC21 365 aa10.38□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Cacnb1Q8R3Z5 597 aa10.38□□□□□ -0.75
Scn8a-202ENSMUST00000096198 CutaQ9CQ89 177 aa10.38□□□□□ -0.75
Scn8a-202ENSMUST00000096198 GraspQ9JJA9 392 aa10.38□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Tmod2Q9JKK7 351 aa10.38□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Lamb1P02469 1786 aa10.38□□□□□ -0.75
Scn8a-202ENSMUST00000096198 CrebbpP45481 2441 aa10.38□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Fam71e1A1L3C1 212 aa10.37□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Pagr1bF6V0H0 108 aa10.37□□□□□ -0.75
Scn8a-202ENSMUST00000096198 AK157302I3ITR1 129 aa10.37□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Znf703P0CL69 594 aa10.37□□□□□ -0.75
Scn8a-202ENSMUST00000096198 NefhP19246 1090 aa10.37□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Casp1P29452 402 aa10.37□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Atp9bP98195 1146 aa10.37□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Ccdc84Q4VA36 332 aaKnown RBP10.37□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Mindy1Q76LS9 468 aa10.37□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Mb21d2Q8C525 428 aa10.37□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Pagr1aQ99L02 253 aa10.37□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Pus10Q9D3U0 527 aa10.37□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Isca1Q9D924 129 aa10.37□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Igsf9bE9PZ19 1328 aa10.36□□□□□ -0.75
Scn8a-202ENSMUST00000096198 1700029H14RikE9PY36 240 aa10.36□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Il15P48346 162 aa10.36□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Parp3Q3ULW8 533 aa10.36□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Rad21Q61550 635 aaKnown RBP10.36□□□□□ -0.75
Scn8a-202ENSMUST00000096198 SpidrQ8BGX7 933 aa10.36□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Map10Q8BJS7 891 aa10.36□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Lamb2Q61292 1799 aa10.36□□□□□ -0.75
Scn8a-202ENSMUST00000096198 Abca4O35600 2310 aa10.35□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms