RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Rps6ka2Q9WUT3 733 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Ulk3Q3U3Q1 472 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Tcp11l1Q8BTG3 509 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Klc3Q91W40 508 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Fsip1Q9D3V5 435 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Camsap2Q8C1B1 1461 aa17.47■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Trim7Q923T7 510 aa17.46■□□□□ 0.39
Ubr3-201ENSMUST00000055758 SbdsP70122 250 aa17.46■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Dnajc8Q6NZB0 253 aaKnown RBP17.46■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Tti2Q8BGV4 512 aa17.46■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Atp2b3Q0VF55 1220 aa17.46■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Zmynd15Q8C0R7 736 aa17.46■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Kif17Q99PW8 1038 aa17.46■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Polr2dQ9D7M8 142 aaKnown RBP17.46■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Dnajc25A2ALW5 357 aa17.46■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Efhd1Q9D4J1 240 aa17.46■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Ak2Q9WTP6 239 aa17.46■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Tiam1Q60610 1591 aa17.46■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Rap1gds1E9Q912 607 aa17.46■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Jmjd4Q8BFT6 427 aa17.46■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Kdm3aQ6PCM1 1323 aa17.46■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Actn3O88990 900 aaKnown RBP17.46■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Kcnh5Q920E3 988 aa17.46■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Acsbg1Q99PU5 721 aa17.46■□□□□ 0.39
Ubr3-201ENSMUST00000055758 MycbpQ9EQS3 103 aa17.46■□□□□ 0.39
Ubr3-201ENSMUST00000055758 Smarca4Q3TKT4 1613 aaKnown RBP17.46■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Tspyl1O88852 379 aa17.46■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Ifit2Q64112 472 aa17.46■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Frmd4bQ920B0 1035 aa17.46■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Msl1Q6PDM1 616 aa17.45■□□□□ 0.38
Ubr3-201ENSMUST00000055758 GopcQ8BH60 463 aa17.45■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Atp6v1aP50516 617 aaKnown RBP17.45■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Tbc1d31Q6NXY1 996 aa17.45■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Sestd1Q80UK0 696 aa17.45■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Rab11fip4Q8BQP8 635 aa17.45■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Dclk3Q8BWQ5 790 aa17.45■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Myl6bQ8CI43 207 aa17.45■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Arhgap31A6X8Z5 1425 aa17.45■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Ifit1bl2Q3U687 466 aa17.45■□□□□ 0.38
Ubr3-201ENSMUST00000055758 CtcfQ61164 736 aaKnown RBP17.45■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Pja2Q80U04 707 aa17.45■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Atp2a1Q8R429 994 aa17.45■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Abcc4E9Q236 1325 aa17.45■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Rsad2Q8CBB9 362 aa17.44■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Abcb4P21440 1276 aa17.44■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Tubb2aQ7TMM9 445 aa17.44■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Clec16aQ80U30 1036 aa17.44■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Tubb2bQ9CWF2 445 aa17.44■□□□□ 0.38
Ubr3-201ENSMUST00000055758 LifrP42703 1092 aa17.44■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Rcn2Q8BP92 320 aa17.44■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Q8R1Y2 203 aa17.44■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Kif22Q3V300 660 aa17.44■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Lin9Q8C735 542 aa17.44■□□□□ 0.38
Ubr3-201ENSMUST00000055758 HdxQ14B70 692 aa17.44■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Abtb2Q7TQI7 1024 aa17.44■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Cd274Q9EP73 290 aa17.44■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Pck1Q9Z2V4 622 aa17.44■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Pa2g4P50580 394 aaKnown RBP17.44■□□□□ 0.38
Ubr3-201ENSMUST00000055758 MthfsQ9D110 203 aa17.44■□□□□ 0.38
Ubr3-201ENSMUST00000055758 CadpsQ80TJ1 1355 aa17.44■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Myh7Q91Z83 1935 aa17.44■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Cdr2P97817 455 aa17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Ddx41Q91VN6 622 aaKnown RBP17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Plekhg2Q6KAU7 1340 aa17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 NrkQ9R0G8 1455 aa17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Ncf2O70145 525 aa17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Mdm2P23804 489 aa17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Nucb1Q02819 459 aaKnown RBP17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Rbbp5Q8BX09 538 aaKnown RBP17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Stac3Q8BZ71 360 aa17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Asic2Q925H0 512 aa17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Zranb2Q9R020 330 aaKnown RBP17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Plcb1Q9Z1B3 1216 aa17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Nfkbil1O88995 381 aa17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Cavin2Q63918 418 aaKnown RBP17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Lmbr1lQ9D1E5 489 aa17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Zbtb12Q9Z150 459 aa17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Taf4E9QAP7 1042 aaKnown RBP17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 GnaqP21279 359 aa17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 MpndQ3TV65 487 aa17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Anks6Q6GQX6 883 aa17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Pak2Q8CIN4 524 aa17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Tut1Q8R3F9 869 aa17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Stx12Q9ER00 274 aa17.43■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Birc2Q62210 612 aa17.42■□□□□ 0.38
Ubr3-201ENSMUST00000055758 ZgpatQ8VDM1 511 aa17.42■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Palm3A2TJV2 734 aa17.42■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Ccdc113Q8C5T8 377 aa17.42■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Acsl3Q9CZW4 720 aaKnown RBP17.42■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Dnaaf1Q9D2H9 634 aa17.42■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Echdc1Q9D9V3 322 aa17.42■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Myh9Q8VDD5 1960 aaKnown RBP17.42■□□□□ 0.38
Ubr3-201ENSMUST00000055758 TchhA0A0B4J1F9 1599 aa17.42■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Terf1P70371 421 aa17.42■□□□□ 0.38
Ubr3-201ENSMUST00000055758 RestQ8VIG1 1082 aa17.42■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Spata17Q9D552 379 aa17.42■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Pls1Q3V0K9 630 aa17.42■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Usp33Q8R5K2 909 aa17.42■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Brd2Q7JJ13 798 aaKnown RBP17.42■□□□□ 0.38
Ubr3-201ENSMUST00000055758 Ribc1Q9D0B8 379 aa17.42■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms