RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 GATD1Q8NB37 220 aa14.88□□□□□ -0.03
SFSWAP-203ENST00000535236 NCR2O95944 276 aa14.88□□□□□ -0.03
SFSWAP-203ENST00000535236 TEX43Q6ZNM6 134 aa14.88□□□□□ -0.03
SFSWAP-203ENST00000535236 SPAG8Q99932 426 aaPredicted RBP14.88□□□□□ -0.03
SFSWAP-203ENST00000535236 RTTNQ86VV8 2226 aa14.88□□□□□ -0.03
SFSWAP-203ENST00000535236 TMEM238C9JI98 176 aa14.88□□□□□ -0.03
SFSWAP-203ENST00000535236 ATXN8Q156A1 80 aa14.88□□□□□ -0.03
SFSWAP-203ENST00000535236 WDR90Q96KV7 1748 aa14.88□□□□□ -0.03
SFSWAP-203ENST00000535236 C17orf82Q86X59 251 aaPredicted RBP14.87□□□□□ -0.03
SFSWAP-203ENST00000535236 RASL10AQ92737 203 aa14.87□□□□□ -0.03
SFSWAP-203ENST00000535236 BPESC1Q9GZL8 116 aa14.87□□□□□ -0.03
SFSWAP-203ENST00000535236 COL8A2P25067 703 aa14.87□□□□□ -0.03
SFSWAP-203ENST00000535236 DMRTA1Q5VZB9 504 aa14.87□□□□□ -0.03
SFSWAP-203ENST00000535236 BRWD3Q6RI45 1802 aa14.87□□□□□ -0.03
SFSWAP-203ENST00000535236 NPC2P61916 151 aa14.87□□□□□ -0.03
SFSWAP-203ENST00000535236 ZNF474Q6S9Z5 364 aaPredicted RBP14.87□□□□□ -0.03
SFSWAP-203ENST00000535236 CRIPAKQ8N1N5 446 aa14.87□□□□□ -0.03
SFSWAP-203ENST00000535236 TOMM40O96008 361 aa14.87□□□□□ -0.03
SFSWAP-203ENST00000535236 SRSF3P84103 164 aaKnown RBP14.87□□□□□ -0.03
SFSWAP-203ENST00000535236 LYZL1Q6UWQ5 148 aa14.87□□□□□ -0.03
SFSWAP-203ENST00000535236 TRAV3A0A0B4J244 114 aa14.86□□□□□ -0.03
SFSWAP-203ENST00000535236 TCRAP04437 139 aa14.86□□□□□ -0.03
SFSWAP-203ENST00000535236 TMEM249Q2WGJ8 235 aa14.86□□□□□ -0.03
SFSWAP-203ENST00000535236 SP5Q6BEB4 398 aaPredicted RBP14.86□□□□□ -0.03
SFSWAP-203ENST00000535236 GFI1Q99684 422 aa14.86□□□□□ -0.03
SFSWAP-203ENST00000535236 FNDC4Q9H6D8 234 aaPredicted RBP14.86□□□□□ -0.03
SFSWAP-203ENST00000535236 ERG28Q9UKR5 140 aa14.86□□□□□ -0.03
SFSWAP-203ENST00000535236 TRAV8-4A0A0B4J246 113 aa14.86□□□□□ -0.03
SFSWAP-203ENST00000535236 Q6ZS92 163 aa14.86□□□□□ -0.03
SFSWAP-203ENST00000535236 ZNF236Q9UL36 1845 aa14.86□□□□□ -0.03
SFSWAP-203ENST00000535236 ZDBF2Q9HCK1 2354 aa14.86□□□□□ -0.03
SFSWAP-203ENST00000535236 D6R8Y8 96 aa14.86□□□□□ -0.03
SFSWAP-203ENST00000535236 LINC01559Q495D7 138 aa14.86□□□□□ -0.03
SFSWAP-203ENST00000535236 DEFB104AQ8WTQ1 72 aa14.86□□□□□ -0.03
SFSWAP-203ENST00000535236 MGST2Q99735 147 aa14.86□□□□□ -0.03
SFSWAP-203ENST00000535236 RHPN1-AS1Q9BWJ2 59 aa14.86□□□□□ -0.03
SFSWAP-203ENST00000535236 F8WEM9 126 aa14.85□□□□□ -0.03
SFSWAP-203ENST00000535236 ERCC8Q13216 396 aa14.85□□□□□ -0.03
SFSWAP-203ENST00000535236 ORAOV1Q8WV07 137 aa14.85□□□□□ -0.03
SFSWAP-203ENST00000535236 PLEKHB2Q96CS7 222 aa14.85□□□□□ -0.03
SFSWAP-203ENST00000535236 LSM4Q9Y4Z0 139 aaKnown RBP14.85□□□□□ -0.03
SFSWAP-203ENST00000535236 SEC11AP67812 179 aa14.85□□□□□ -0.03
SFSWAP-203ENST00000535236 SIGLEC9Q9Y336 463 aa14.85□□□□□ -0.03
SFSWAP-203ENST00000535236 SH2D1AO60880 128 aa14.85□□□□□ -0.03
SFSWAP-203ENST00000535236 LCN12Q6JVE5 192 aa14.85□□□□□ -0.03
SFSWAP-203ENST00000535236 MSRB2Q9Y3D2 182 aa14.85□□□□□ -0.03
SFSWAP-203ENST00000535236 C6orf226Q5I0X4 101 aa14.84□□□□□ -0.03
SFSWAP-203ENST00000535236 PSME4Q14997 1843 aa14.84□□□□□ -0.03
SFSWAP-203ENST00000535236 RNF223E7ERA6 249 aa14.84□□□□□ -0.03
SFSWAP-203ENST00000535236 VCYO14598 125 aa14.84□□□□□ -0.03
SFSWAP-203ENST00000535236 MS4A6AQ9H2W1 248 aa14.84□□□□□ -0.03
SFSWAP-203ENST00000535236 ATRAIDQ6UW56 229 aa14.84□□□□□ -0.03
SFSWAP-203ENST00000535236 NDUFS8O00217 210 aa14.84□□□□□ -0.03
SFSWAP-203ENST00000535236 SAA4P35542 130 aa14.84□□□□□ -0.03
SFSWAP-203ENST00000535236 C1orf159Q96HA4 380 aa14.84□□□□□ -0.03
SFSWAP-203ENST00000535236 LY6HO94772 140 aa14.84□□□□□ -0.03
SFSWAP-203ENST00000535236 Q8TAT8 98 aa14.84□□□□□ -0.03
SFSWAP-203ENST00000535236 LYPD2Q6UXB3 125 aa14.83□□□□□ -0.03
SFSWAP-203ENST00000535236 SPOCK3Q9BQ16 436 aa14.83□□□□□ -0.03
SFSWAP-203ENST00000535236 TMEM155Q4W5P6 130 aa14.83□□□□□ -0.04
SFSWAP-203ENST00000535236 INTS1Q8N201 2190 aaKnown RBP14.83□□□□□ -0.04
SFSWAP-203ENST00000535236 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.83□□□□□ -0.04
SFSWAP-203ENST00000535236 IGHG3P01860 377 aa14.83□□□□□ -0.04
SFSWAP-203ENST00000535236 DEFB130BP0DP73 79 aa14.83□□□□□ -0.04
SFSWAP-203ENST00000535236 DEFB130AP0DP74 79 aa14.83□□□□□ -0.04
SFSWAP-203ENST00000535236 A8MWV9 139 aa14.83□□□□□ -0.04
SFSWAP-203ENST00000535236 LAMTOR3Q9UHA4 124 aa14.83□□□□□ -0.04
SFSWAP-203ENST00000535236 PSG3Q16557 428 aa14.82□□□□□ -0.04
SFSWAP-203ENST00000535236 GSN-AS1Q9NRJ2 163 aa14.82□□□□□ -0.04
SFSWAP-203ENST00000535236 NEUROG3Q9Y4Z2 214 aa14.82□□□□□ -0.04
SFSWAP-203ENST00000535236 TAF1LQ8IZX4 1826 aa14.82□□□□□ -0.04
SFSWAP-203ENST00000535236 ZNF479Q96JC4 524 aa14.82□□□□□ -0.04
SFSWAP-203ENST00000535236 DAZ1Q9NQZ3 744 aaKnown RBP14.82□□□□□ -0.04
SFSWAP-203ENST00000535236 SYNJ2BPP57105 145 aa14.82□□□□□ -0.04
SFSWAP-203ENST00000535236 AGMATQ9BSE5 352 aa14.82□□□□□ -0.04
SFSWAP-203ENST00000535236 DICER1Q9UPY3 1922 aaKnown RBP14.82□□□□□ -0.04
SFSWAP-203ENST00000535236 FGF16O43320 207 aa14.82□□□□□ -0.04
SFSWAP-203ENST00000535236 IGKV1-5P01602 117 aa14.82□□□□□ -0.04
SFSWAP-203ENST00000535236 PCP4P48539 62 aa14.82□□□□□ -0.04
SFSWAP-203ENST00000535236 IGFL4Q6B9Z1 124 aa14.82□□□□□ -0.04
SFSWAP-203ENST00000535236 IGKV1D-17A0A075B6S4 117 aa14.81□□□□□ -0.04
SFSWAP-203ENST00000535236 CLPSP04118 112 aa14.81□□□□□ -0.04
SFSWAP-203ENST00000535236 HSD52Q0P140 79 aa14.81□□□□□ -0.04
SFSWAP-203ENST00000535236 LHFPL1Q86WI0 220 aa14.81□□□□□ -0.04
SFSWAP-203ENST00000535236 ARID2Q68CP9 1835 aa14.81□□□□□ -0.04
SFSWAP-203ENST00000535236 MEGF9Q9H1U4 602 aa14.81□□□□□ -0.04
SFSWAP-203ENST00000535236 RALGAPA1Q6GYQ0 2036 aa14.81□□□□□ -0.04
SFSWAP-203ENST00000535236 OVOL3O00110 214 aa14.81□□□□□ -0.04
SFSWAP-203ENST00000535236 SS18Q15532 418 aa14.81□□□□□ -0.04
SFSWAP-203ENST00000535236 C14orf178Q8N769 122 aaPredicted RBP14.81□□□□□ -0.04
SFSWAP-203ENST00000535236 Q5PR19 223 aa14.81□□□□□ -0.04
SFSWAP-203ENST00000535236 CSTL1Q9H114 145 aa14.81□□□□□ -0.04
SFSWAP-203ENST00000535236 PNRC2Q9NPJ4 139 aaKnown RBP14.81□□□□□ -0.04
SFSWAP-203ENST00000535236 INS-IGF2F8WCM5 200 aa14.8□□□□□ -0.04
SFSWAP-203ENST00000535236 RFNGQ9Y644 331 aa14.8□□□□□ -0.04
SFSWAP-203ENST00000535236 MSMBP08118 114 aa14.8□□□□□ -0.04
SFSWAP-203ENST00000535236 GATA3P23771 443 aa14.8□□□□□ -0.04
SFSWAP-203ENST00000535236 GAS1P54826 345 aa14.8□□□□□ -0.04
SFSWAP-203ENST00000535236 Q6P435 159 aa14.8□□□□□ -0.04
SFSWAP-203ENST00000535236 LINC00473A8K010 186 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms