RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 LRRK1Q38SD2 2015 aa5.43□□□□□ -1.54
PDCD4-211ENST00000498367 ARAP3Q8WWN8 1544 aa5.43□□□□□ -1.54
PDCD4-211ENST00000498367 ZNF638Q14966 1978 aaKnown RBP5.42□□□□□ -1.54
PDCD4-211ENST00000498367 IGLV5-39A0A0G2JS06 123 aa5.42□□□□□ -1.54
PDCD4-211ENST00000498367 C9JCJ5 164 aa5.42□□□□□ -1.54
PDCD4-211ENST00000498367 UBL3O95164 117 aa5.42□□□□□ -1.54
PDCD4-211ENST00000498367 IGKV1-5P01602 117 aa5.42□□□□□ -1.54
PDCD4-211ENST00000498367 SLPIP03973 132 aa5.42□□□□□ -1.54
PDCD4-211ENST00000498367 TRGC1P0CF51 173 aa5.42□□□□□ -1.54
PDCD4-211ENST00000498367 ZNF286BP0CG31 522 aa5.42□□□□□ -1.54
PDCD4-211ENST00000498367 DYNLT3P51808 116 aa5.42□□□□□ -1.54
PDCD4-211ENST00000498367 TDRG1Q3Y452 100 aa5.42□□□□□ -1.54
PDCD4-211ENST00000498367 Q6ZPA2 131 aa5.42□□□□□ -1.54
PDCD4-211ENST00000498367 GPHB5Q86YW7 130 aa5.42□□□□□ -1.54
PDCD4-211ENST00000498367 ZC2HC1AQ96GY0 325 aa5.42□□□□□ -1.54
PDCD4-211ENST00000498367 VSIG2Q96IQ7 327 aa5.42□□□□□ -1.54
PDCD4-211ENST00000498367 SLC35B3Q9H1N7 401 aa5.42□□□□□ -1.54
PDCD4-211ENST00000498367 C16orf95Q9H693 158 aa5.42□□□□□ -1.54
PDCD4-211ENST00000498367 BCL2L10Q9HD36 194 aa5.42□□□□□ -1.54
PDCD4-211ENST00000498367 F11RQ9Y624 299 aaKnown RBP5.42□□□□□ -1.54
PDCD4-211ENST00000498367 NCOA2Q15596 1464 aa5.42□□□□□ -1.54
PDCD4-211ENST00000498367 MYH7BA7E2Y1 1941 aa5.42□□□□□ -1.54
PDCD4-211ENST00000498367 TOPBP1Q92547 1522 aa5.42□□□□□ -1.54
PDCD4-211ENST00000498367 NUP205Q92621 2012 aa5.41□□□□□ -1.54
PDCD4-211ENST00000498367 MIA3Q5JRA6 1907 aa5.41□□□□□ -1.54
PDCD4-211ENST00000498367 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.41□□□□□ -1.54
PDCD4-211ENST00000498367 H3BRM9 83 aa5.41□□□□□ -1.54
PDCD4-211ENST00000498367 HBDP02042 147 aa5.41□□□□□ -1.54
PDCD4-211ENST00000498367 POLR2JP52435 117 aaKnown RBP5.41□□□□□ -1.54
PDCD4-211ENST00000498367 ZNF136P52737 540 aa5.41□□□□□ -1.54
PDCD4-211ENST00000498367 SNRPD3P62318 126 aaKnown RBP5.41□□□□□ -1.54
PDCD4-211ENST00000498367 PRR4Q16378 134 aa5.41□□□□□ -1.54
PDCD4-211ENST00000498367 FAM72AQ5TYM5 149 aa5.41□□□□□ -1.54
PDCD4-211ENST00000498367 DNAJC24Q6P3W2 148 aa5.41□□□□□ -1.54
PDCD4-211ENST00000498367 DPPA3Q6W0C5 159 aa5.41□□□□□ -1.54
PDCD4-211ENST00000498367 ATXN7L3BQ96GX2 97 aa5.41□□□□□ -1.54
PDCD4-211ENST00000498367 SMIM14Q96QK8 99 aa5.41□□□□□ -1.54
PDCD4-211ENST00000498367 SMDT1Q9H4I9 107 aa5.41□□□□□ -1.54
PDCD4-211ENST00000498367 COL1A2P08123 1366 aa5.41□□□□□ -1.54
PDCD4-211ENST00000498367 MYH1P12882 1939 aa5.4□□□□□ -1.54
PDCD4-211ENST00000498367 PIK3C2AO00443 1686 aa5.4□□□□□ -1.54
PDCD4-211ENST00000498367 IGHV3OR16-10A0A075B7F0 116 aa5.4□□□□□ -1.54
PDCD4-211ENST00000498367 ZNF705FA8MVS1 300 aaPredicted RBP5.4□□□□□ -1.54
PDCD4-211ENST00000498367 OOSP1A8MZH6 123 aa5.4□□□□□ -1.54
PDCD4-211ENST00000498367 HLA-DQA1P01909 254 aa5.4□□□□□ -1.54
PDCD4-211ENST00000498367 CD3DP04234 171 aa5.4□□□□□ -1.54
PDCD4-211ENST00000498367 CHTF8P0CG12 524 aa5.4□□□□□ -1.54
PDCD4-211ENST00000498367 ZNF705BP0CI00 300 aaPredicted RBP5.4□□□□□ -1.54
PDCD4-211ENST00000498367 SLC25A6P12236 298 aa5.4□□□□□ -1.54
PDCD4-211ENST00000498367 COX7CP15954 63 aa5.4□□□□□ -1.54
PDCD4-211ENST00000498367 RPS10P46783 165 aaKnown RBP5.4□□□□□ -1.54
PDCD4-211ENST00000498367 ATP5EP56381 51 aaPredicted RBP5.4□□□□□ -1.54
PDCD4-211ENST00000498367 RSPO1Q2MKA7 263 aaPredicted RBP5.4□□□□□ -1.54
PDCD4-211ENST00000498367 LGALS9CQ6DKI2 356 aa5.4□□□□□ -1.54
PDCD4-211ENST00000498367 GUSBP11Q6P575 273 aa5.4□□□□□ -1.54
PDCD4-211ENST00000498367 MARCH3Q86UD3 253 aa5.4□□□□□ -1.54
PDCD4-211ENST00000498367 STAG3L4Q8TBR4 150 aa5.4□□□□□ -1.54
PDCD4-211ENST00000498367 IL36BQ9NZH7 164 aa5.4□□□□□ -1.54
PDCD4-211ENST00000498367 SPHKAPQ2M3C7 1700 aa5.4□□□□□ -1.55
PDCD4-211ENST00000498367 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.4□□□□□ -1.55
PDCD4-211ENST00000498367 LTN1O94822 1766 aa5.39□□□□□ -1.55
PDCD4-211ENST00000498367 IGHV4-30-2A0A087WSY4 118 aa5.39□□□□□ -1.55
PDCD4-211ENST00000498367 A0A087WW49 117 aa5.39□□□□□ -1.55
PDCD4-211ENST00000498367 IGHV3-74A0A0B4J1X5 117 aa5.39□□□□□ -1.55
PDCD4-211ENST00000498367 LOC107986453A0A1B0GWG9 222 aa5.39□□□□□ -1.55
PDCD4-211ENST00000498367 DNAJC9-AS1A6NH13 148 aa5.39□□□□□ -1.55
PDCD4-211ENST00000498367 M0R129 80 aa5.39□□□□□ -1.55
PDCD4-211ENST00000498367 HYPMO75409 117 aa5.39□□□□□ -1.55
PDCD4-211ENST00000498367 GABARAPO95166 117 aa5.39□□□□□ -1.55
PDCD4-211ENST00000498367 IGLC2P0DOY2 106 aa5.39□□□□□ -1.55
PDCD4-211ENST00000498367 IGLC3P0DOY3 106 aa5.39□□□□□ -1.55
PDCD4-211ENST00000498367 HLA-DMBP28068 263 aa5.39□□□□□ -1.55
PDCD4-211ENST00000498367 FGF12P61328 243 aa5.39□□□□□ -1.55
PDCD4-211ENST00000498367 HIST1H4AP62805 103 aaKnown RBP5.39□□□□□ -1.55
PDCD4-211ENST00000498367 NFE4Q86UQ8 179 aa5.39□□□□□ -1.55
PDCD4-211ENST00000498367 CD177Q8N6Q3 437 aa5.39□□□□□ -1.55
PDCD4-211ENST00000498367 C15orf53Q8NAA6 179 aa5.39□□□□□ -1.55
PDCD4-211ENST00000498367 CLEC7AQ9BXN2 247 aa5.39□□□□□ -1.55
PDCD4-211ENST00000498367 TP73-AS1Q9UF72 201 aa5.39□□□□□ -1.55
PDCD4-211ENST00000498367 NUP210LQ5VU65 1888 aa5.39□□□□□ -1.55
PDCD4-211ENST00000498367 CTTNBP2Q8WZ74 1663 aa5.38□□□□□ -1.55
PDCD4-211ENST00000498367 PPLO60437 1756 aa5.38□□□□□ -1.55
PDCD4-211ENST00000498367 IGKV1D-43A0A0B4J1Z2 117 aa5.38□□□□□ -1.55
PDCD4-211ENST00000498367 A0A0D9SEW6 157 aa5.38□□□□□ -1.55
PDCD4-211ENST00000498367 C7orf66A4D0T2 115 aa5.38□□□□□ -1.55
PDCD4-211ENST00000498367 C16orf97H3BN30 126 aa5.38□□□□□ -1.55
PDCD4-211ENST00000498367 ZNF253O75346 499 aa5.38□□□□□ -1.55
PDCD4-211ENST00000498367 LMO2P25791 158 aa5.38□□□□□ -1.55
PDCD4-211ENST00000498367 REG3AQ06141 175 aa5.38□□□□□ -1.55
PDCD4-211ENST00000498367 LINC01554Q52M75 96 aa5.38□□□□□ -1.55
PDCD4-211ENST00000498367 SPRNQ5BIV9 151 aa5.38□□□□□ -1.55
PDCD4-211ENST00000498367 ADAMTSL4-AS1Q5T5F5 129 aa5.38□□□□□ -1.55
PDCD4-211ENST00000498367 PDPNQ86YL7 162 aa5.38□□□□□ -1.55
PDCD4-211ENST00000498367 OR10G2Q8NGC3 310 aa5.38□□□□□ -1.55
PDCD4-211ENST00000498367 ZNF714Q96N38 554 aa5.38□□□□□ -1.55
PDCD4-211ENST00000498367 OPRPNQ99935 248 aaPredicted RBP5.38□□□□□ -1.55
PDCD4-211ENST00000498367 DNAJC15Q9Y5T4 150 aa5.38□□□□□ -1.55
PDCD4-211ENST00000498367 ANKRD31Q8N7Z5 1873 aa5.38□□□□□ -1.55
PDCD4-211ENST00000498367 CHD3Q12873 2000 aaKnown RBP5.38□□□□□ -1.55
PDCD4-211ENST00000498367 PXDNQ92626 1479 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms